Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2015-11-04 |  |
In vitro assembled bacteriophage phi6 polymerase complex [stack of 798 particles in MRC format] | Ilca SL, Kotecha A, Sun X, Poranen MP, Stuart DI, Huiskonen JT [Pubmed: 26534841] [DOI: 10.1038/ncomms9843] |
8.1 GB | 7.9 Å |
| 2022-09-09 |  |
Cryo-EM structure of GH31 alpha-1,3-glucosidase from Lactococcus lactis subsp. cremoris [995 multi-frame micrographs composed of 50 frames each in TIFF format] | Ikegaya M, Moriya T, Adachi N, Kawasaki M, Park EY, Miyazaki T [Pubmed: 35293315] [DOI: 10.1016/j.jbc.2022.101827] |
911.2 GB | 2.73 Å |
| 2024-06-06 |  |
SBF-SEM datasets of chaetoblasts constructing bristles in Platynereis dumerilii [multiple data sets in PNG format] | Ikeda KN, Belevich I, Zelaya-Lainez L, Orel L, Füssl J, Gumulec J, Hellmich C, Jokitalo E, Raible F [Pubmed: 38740737] [DOI: 10.1038/s41467-024-48044-3] |
79.7 GB | — |
| 2018-12-13 |  |
Beta-2-microglobulin fibrils with multiple polymorphs formed at pH 2 [5549 micrographs in MRC format] | Iadanza MG [Pubmed: 30375379] [DOI: 10.1038/s41467-018-06761-6] |
294.3 GB | 3.975 Å |
| 2020-06-08 |  |
Cryo-EM structure of coronavirus-HKU1 haemagglutinin esterase [6029 multi-frame micrographs composed of 27 frames each in MRC format] | Hurdiss DL, Drulyte I [Pubmed: 32938911] [DOI: 10.1038/s41467-020-18440-6] |
2.9 TB | 3.39 Å |
| 2019-10-07 |  |
Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
898.1 MB | — |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [4529 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
605.2 GB | — |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [4490 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
273.8 GB | — |
| 2019-10-07 |  |
Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
583.8 MB | — |
| 2021-10-19 |  |
Apoferritin, TMV and T20S proteasome in nanofluidic channels [multiple data sets in TIFF format] | Huber ST, Sarajlic E, Huijink R, Weis F, Evers WH, Jakobi AJ [Pubmed: 35060902] [DOI: 10.7554/eLife.72629] |
308.3 GB | 3.0 - 5.4 Å |
| 2020-11-18 |  |
Structure and assembly of ESCRT-III helical Vps24 filaments [1320 micrographs in MRC format] | Huber ST, Mostafavi S, Mortensen SA, Sachse C [Pubmed: 32875105] [DOI: 10.1126/sciadv.aba4897] |
70.0 GB | 3.2 Å |
| 2025-02-03 |  |
Cryo-EM images of B. megaterium gas vesicles in thin vitreous monolayers [4352 multi-frame micrographs composed of 60 frames each in TIFF format] | Huber ST, Jakobi AJ [Pubmed: 36868215] [DOI: 10.1016/j.cell.2023.01.041] |
2.3 TB | 3.2 Å |
| 2024-07-19 |  |
Cryo-ET dataset of purified SARS-CoV-2 double membrane vesicles formed by nsp3-4 [4635 tilt series in MRC format] | Huang YX, Ni T [DOI: 10.1016/s41586-024-07817-y] |
10.3 TB | — |
| 2021-08-13 |  |
Human apo ferritin frozen on TEM grid with Amorphous nickel titanium alloy supporting film [426 multi-frame micrographs composed of 32 frames each in TIFF format] | Huang X, Zhang L, Wen Z, Chen H, Li S, Ji G, Yin CC, Sun F [Pubmed: 32758492] [DOI: 10.1016/j.pbiomolbio.2020.07.009] |
134.5 GB | 2.4 Å |
| 2021-08-13 |  |
Human apo ferritin frozen on TEM grid with amorphous carbon supporting film [743 multi-frame micrographs composed of 32 frames each in TIFF format] | Huang X, Zhang L, Wen Z, Chen H, Li S, Ji G, Yin CC, Sun F [Pubmed: 32758492] [DOI: 10.1016/j.pbiomolbio.2020.07.009] |
226.5 GB | 2.6 Å |
| 2022-12-12 |  |
E.coli RNaseP Holoenzyme with Mg2+ [14025 multi-frame micrographs composed of 40 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
5.6 TB | 3.1 Å |
| 2022-12-12 |  |
E.coli RNaseP ES complex with AU_ptRNA substrate in the presence of Ca2+ [13608 multi-frame micrographs composed of 60 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
8.3 TB | 3.2 Å |
| 2023-07-03 |  |
CryoEM structure of yeast Arginyltransferase 1 (ATE1) [14306 multi-frame micrographs composed of 50 frames each in TIFF format] | Huang W [Pubmed: 37076488] [DOI: 10.1038/s41467-023-38004-8] |
7.1 TB | 3.1 - 3.6 Å |
| 2022-12-12 |  |
E.coli RNaseP ES complex with GG_ptRNA substrate in the presence of Ca2+ [14541 multi-frame micrographs composed of 60 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
8.9 TB | 3.4 Å |
| 2021-11-02 |  |
CryoEM SPA dataset for NB21, SARS-Cov-2 and NB105 trimeric complex [5874 multi-frame micrographs composed of 45 frames each in TIFF format] | Huang W [Pubmed: 34344900] [DOI: 10.1038/s41467-021-24963-3] |
2.8 TB | 3.58 Å |
| 2021-11-05 |  |
CryoEM SPA dataset for NB21, SARS-Cov-2 and NB36 trimeric complex [9390 multi-frame micrographs composed of 63 frames each in TIFF format] | Huang W [Pubmed: 34344900] [DOI: 10.1038/s41467-021-24963-3] |
5.0 TB | 3.55 Å |
| 2025-06-12 |  |
Cryo electron tomography of PR/8/34 influenza A virus incubated with LSTc glycan [10 tilt series in TIFF format] | Huang QJ, Song K, Schiffer CA, Somasundaran M [Pubmed: 40244672] [DOI: 10.1073/pnas.2426427122] |
37.8 GB | 8.5 - 10.0 Å |
| 2025-06-12 |  |
Cryo electron tomography of PR/8/34 influenza A virus [10 tilt series in TIFF format] | Huang QJ, Song K, Schiffer CA, Somasundaran M [Pubmed: 40244672] [DOI: 10.1073/pnas.2426427122] |
26.5 GB | 8.5 - 10.0 Å |
| 2023-04-27 |  |
Lloviu cuevavirus nucleoprotein RNA complex [multiple data sets in TIFF format] | Hu S, Fujita-Fujiharu Y, Sugita Y, Wendt L, Muramoto Y, Nakano M, Hoenen T, Noda T [DOI: 10.1093/pnasnexus/pgad120] |
4.4 TB | 3.0356 Å |
| 2024-04-17 |  |
Structure of human constitutive 20S proteasome complexed with the inhibitor TDI-8304 [16113 multi-frame micrographs composed of 50 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
6.5 TB | 2.04 Å |
