Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, access to some data files is currently unavailable.
The period will be extended due to a serious problem.
We apologize for any inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-07 |  |
Cryo electron tomography of wild-type Drosophila nephrocytes [multiple data sets in MRC format] | Moser D, Lang K, Birtasu AN, Grahammer F, Helmstaedter M, Scheffer MP, Hermle T, Frangakis AF [DOI: 10.1038/s41467-025-64347-5] |
1.5 TB | 38.0 Å |
| 2025-12-07 |  |
Transporter associated with antigen processing (TAP) bound to the viral protein BNLF2a from Epstein-Barr virus [8676 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.8 Å |
| 2025-12-07 |  |
Transporter associated with antigen processing (TAP) bound to ATP, ADP, and the viral protein rhUS6 from rhesus cytomegalovirus [18184 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.7 TB | 3.3 Å |
| 2025-12-07 |  |
Single particle cryoEM structure of Latrophilin-3 (ADGRL3) HormR and GAIN domains in the context of the holoreceptor [6976 multi-frame micrographs composed of 58 frames each in TIFF format] | Kordon SP, Bandekar SJ, Arac D [Pubmed: 39627215] [DOI: 10.1038/s41467-024-54836-4] |
5.8 TB | 3.9 Å |
| 2025-12-07 |  |
Single particle cryoEM of Jumbophage Gp316/JADA protein [15625 multi-frame micrographs composed of 50 frames each in EER format] | Muralidharan A, Rita Costa A, Fierlier D, van den Berg DF, van den Bossche H, Zoumaro-Djayoon A, Pabst M, Pacesa M, Correia BE, Brouns SJJ [DOI: 10.1101/2025.07.08.663546] |
6.4 TB | 2.1 Å |
| 2025-12-07 |  |
Human antibody Fab MPV498 bound to hMPV B2 post-fusion F [7900 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
505.6 GB | 2.61 Å |
| 2025-12-07 |  |
Human antibody Fab MPV510 bound to hMPV DsCav-ES2-IPDS F protein [8000 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
4.1 TB | 2.85 Å |
| 2025-12-07 |  |
Human antibody Fab MPV513 bound to hMPV DsCav-ES2 [6100 micrographs in MRC format] | Khalil AM, Esfahani BG, Miller RJ, Huang J, Kuan G, Balmaseda A, Gordon A, Mousa JJ [DOI: 10.1101/2025.08.29.673069] |
1.1 TB | 3.94 Å |
| 2025-12-06 |  |
CryoEM of E. coli RNA polymerase Sigma N transcription initiation intermediates [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
10.5 TB | 2.6 - 3.1 Å |
| 2025-12-05 |  |
CryoEM of mycobacterial open-gate proteasome complexed with engineered bacterial enhancer binding protein (bEBP) [multiple data sets in TIFF and MRC formats] | Mueller AU, Molina N, Nixon BT, Darst SA [Pubmed: 40759887] [DOI: 10.1038/s41467-025-61837-4] |
479.4 GB | 4.6 Å |
| 2025-12-03 |  |
GLIC in MSP1E3D1 nanodisc at pH 4.0 [14076 multi-frame micrographs composed of 1953 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
10.2 TB | 2.74 - 3.45 Å |
| 2025-12-03 |  |
GLIC Y251A mutant in MSP1E3D1 nanodisc at pH 2.5 [10188 multi-frame micrographs composed of 1251 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
6.2 TB | 2.87 Å |
| 2025-12-03 |  |
GLIC F116A mutant in MSP1E3D1 nanodisc at pH 2.5 [11131 multi-frame micrographs composed of 1575 frames each in EER format] | Li Z, Bharambe N, Manishrao Lande K, Feddersen B, Manikkoth Balakrishna A, Biggin PC, Sahu G, Basak S [Pubmed: 41129221] [DOI: 10.1073/pnas.2512811122] |
7.3 TB | 2.14 Å |
| 2025-12-03 |  |
Human polymerase epsilon bound to PCNA and DNA with an in-situ-generated mismatch [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 40440070] [DOI: 10.1073/pnas.2507232122] |
13.4 TB | 3.11 - 3.6 Å |
| 2025-12-03 |  |
Human VDAC1 in cMSP1delH5 circularized nanodiscs. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
4.4 TB | 5.73 Å |
| 2025-12-03 |  |
Motion-corrected single-particle cryo-EM dataset of PI3KC3-C1 bound to RAB1A(Q70L) [multiple data sets in MRC format] | Cook ASI, Hurley JH, Chen M [Pubmed: 39913640] [DOI: 10.1126/science.adl3787] |
3.5 TB | 2.73 - 4.5 Å |
| 2025-12-01 |  |
Integrin alpha-5 beta-1 in complex with MINT1526a Fab [multiple data sets in TIFF, MRC and MRCS formats] | Nguyen AN, Campbell MGC [Pubmed: 39829743] [DOI: 10.1101/2025.01.08.631572] |
3.1 TB | 2.7 Å |
| 2025-12-01 |  |
Human VDAC1 in cMSP1D1 circularized nanodiscs, monomeric form. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
2.2 TB | 7.21 Å |
| 2025-12-01 |  |
Human VDAC1 in cMSP1D1 circularized nanodiscs, dimeric form. [multiple data sets in EER and MRC formats] | Broutzakis G, Gatsogiannis C [Pubmed: 41145501] [DOI: 10.1038/s41467-025-65363-1] |
2.2 TB | 6.99 Å |
| 2025-11-30 |  |
Cryo-EM micrographs of R2Tg retrotransposon initiating target-primed reverse transcription [10628 multi-frame micrographs composed of 40 frames each in TIFF format] | Wilkinson ME, Zhang F [Pubmed: 40603868] [DOI: 10.1038/s41467-025-61321-z] |
1.7 TB | 3.2 Å |
| 2025-11-30 |  |
Tyrocidine synthetase modules 1 and 2 crosslinked in the condensation state, complex A [3636 multi-frame micrographs composed of 1512 frames each in EER format] | Heberlig GW, La Clair JJ, Burkart MD [Pubmed: 39663458] [DOI: 10.1038/s41586-024-08306-y] |
2.8 TB | 2.97 Å |
| 2025-11-25 |  |
Source data for AI-directed voxel extraction and volume EM identify intrusions as sites of mitochondrial contact [multiple data sets in TIFF format] | Padman BS, Lindblom R, Lazarou M [DOI: 10.1083/jcb.202411138] |
32.8 GB | — |
| 2025-11-24 |  |
Structural mechanism of the Retron-Eco7 anti-phage defense system [7847 multi-frame micrographs composed of 50 frames each in TIFF format] | Ishikawa J, Yoneyama K, Yamashita K, Nishimasu H | 1.7 TB | 2.58 - 2.76 Å |
| 2025-11-21 |  |
Cryo Electron Microscopy of hIAPP and rIAPP fibrils in different aggregation solutions [stack of 1200 particles in MRCS format] | Valli DV, Maj MM [DOI: 10.1021/acs.biochem.5c00042] |
737.2 GB | — |
| 2025-11-21 |  |
GLIC in MSP1E3D1 nanodisc at pH 2.5 [6449 multi-frame micrographs composed of 60 frames each in TIFF format] | Bharambe N, Li Z, Seiferth D, Balakrishna AM, Biggin PC, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
3.5 TB | 2.6476 Å |
