Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-07-06 |  |
Phase-plate cryo-EM of human TFIIH [multiple data sets in TIFF format] | Greber BJ, Toso DB, Fang J, Nogales E [Pubmed: 30860024] [DOI: 10.7554/eLife.44771] |
9.2 TB | 3.7 Å |
| 2020-07-06 |  |
Single particle cryo-EM dataset of human adenovirus HAdV-D26 [stack of 8684 particles in MRCS format] | Abrishami V, Reddy VS, Huiskonen JT [Pubmed: 32470354] [DOI: 10.1016/j.pbiomolbio.2020.05.004] |
46.5 GB | 3.1 - 7.34 Å |
| 2020-07-03 |  |
Cryo-EM structure of RNF213 reveals a RING-type E3 with a dynein core and cysteine reactivity [multiple data sets in TIFF format] | Ahel J, Lehner A, Vogel A, Schleiffer A, Meinhart A, Haselbach D, Clausen T [Pubmed: 32573437] [DOI: 10.7554/eLife.56185] |
1.9 TB | 3.2 Å |
| 2020-07-01 |  |
Single particle cryo electron microscopy of the human serotonin transporter bound with paroxetine and in complex with 8B6 Fab [multiple data sets in TIFF and MRC formats] | Coleman JA, Navratna V, Antermite D, Yang D, Bull JA, Gouaux E [Pubmed: 32618269] [DOI: 10.7554/eLife.56427] |
2.7 TB | 3.3 Å |
| 2020-06-30 |  |
Cryo-EM structure of TMEM16F in digitonin with calcium bound [stack of 2505 particles in MRC format] | Feng S, Dang S, Han TW, Ye W, Jin P, Cheng T, Li J, Jan YN, Jan LY, Cheng Y [Pubmed: 31291589] [DOI: 10.1016/j.celrep.2019.06.023] |
308.8 GB | 3.5 Å |
| 2020-06-30 |  |
Structural basis for strand-transfer inhibitor binding to HIV intasomes [multiple data sets in MRC format] | Passos DO, Li M, Jóźwik IK, Zhao XZ, Santos-Martins D, Yang R, Smith SJ, Jeon Y, Forli S, Hughes SH, Burke TR, Craigie R, Lyumkis D [Pubmed: 32001521] [DOI: 10.1126/science.aay8015] |
544.6 GB | 2.8 Å |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
2.3 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2020-06-30 |  |
Soft X-ray Tomography of mock-infected U2OS cells [1 tilt series in MRC format] | Kounatidis I, Stanifer ML, Phillips MA, Paul-Gilloteaux P, Heiligenstein X, Wang H, Okolo CA, Fish TM, Spink MC, Stuart DI, Davis I, Boulant S, Grimes JM, Dobbie IM, Harkiolaki M [Pubmed: 32610083] [DOI: 10.1016/j.cell.2020.05.051] |
1.2 GB | — |
| 2020-06-29 |  |
Sub-3 Å Apoferritin Structure Determined With Full Range of Phase Shifts Using A Single Position Of Volta Phase Plate [multiple data sets in MRC and TIFF formats] | Li K [Pubmed: 30928614] [DOI: 10.1016/j.jsb.2019.03.007] |
778.8 GB | 2.51 - 2.94 Å |
| 2020-06-26 |  |
1.8 Å resolution structure of β-galactosidase with a 200 kV CRYO ARM electron microscope [4949 multi-frame micrographs composed of 40 frames each in TIFF format] | Merk A, Fukumura T, Zhu X, Darling JE, Grisshammer R, Ognjenovic J, Subramaniam S [Pubmed: 32695410] [DOI: 10.1107/S2052252520006855] |
1.1 TB | 1.8 Å |
| 2020-06-19 |  |
SARS-CoV-2 ORF3a dimer in an MSP1E3D1 lipid nanodisc [6309 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
4.4 TB | 2.9 Å |
| 2020-06-19 |  |
SARS-CoV-2 ORF3a dimer with added Emodin in an MSP1E3D1 lipid nanodisc [6750 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
4.5 TB | 3.7 Å |
| 2020-06-19 |  |
Tetrameric SARS-CoV-2 ORF3a in a lipid nanodisc [7092 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Sorum B, Mali SS, Hoel CM, Sridharan S, Remis JP, Toso DB, Kotecha A, Bautista DM, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
4.8 TB | 6.5 Å |
| 2020-06-16 |  |
Characterization of the SARS-CoV-2 S Protein: Biophysical, Biochemical, Structural, and Antigenic Analysis [multiple data sets in TIFF and MRC formats] | Herrera NG, Morano NC, Celikgil A, Georgiev GI, Malonis R, Lee JH, Tong K, Vergnolle O, Massimi A, Yen LY, Noble AJ, Kopylov M, Bonanno JB, Garrett-Thomson SC, Hayes DB, Bortz R, Wirchnianski A, Florez C, Laudermilch E, Haslwanter D, Fels J, Dieterle M, Jangra R, Barnhill J, Mengotto A, Kimmel D, Daily J, Pirofski L, Chandran K, Brenowitz M, Garforth S, Eng E, Lai JR, Almo SC [Pubmed: 32587972] [DOI: 10.1101/2020.06.14.150607] |
484.3 GB | 3.22 Å |
| 2020-06-12 |  |
High resolution cryo-EM structure of urease from the pathogen Yersinia enterocolitica [multiple data sets in MRC and TIFF formats] | Righetto RD, Anton L, Adaixo R, Jakob RP, Zivanov J, Mahi MA, Ringler P, Schwede T, Maier T, Stahlberg H [Pubmed: 33037208] [DOI: 10.1038/s41467-020-18870-2] |
839.9 GB | 1.98 Å |
| 2020-06-08 |  |
Cryo-EM structure of coronavirus-HKU1 haemagglutinin esterase [6029 multi-frame micrographs composed of 27 frames each in MRC format] | Hurdiss DL, Drulyte I [Pubmed: 32938911] [DOI: 10.1038/s41467-020-18440-6] |
2.9 TB | 3.39 Å |
| 2020-05-29 |  |
Single particle cryo-EM dataset for LetB from E.coli [multiple data sets in MRC and MRCS formats] | Isom GL, Coudray N, MacRae MR, McManus CT, Ekiert DC, Bhabha G [Pubmed: 32359438] [DOI: 10.1016/j.cell.2020.03.030] |
928.6 GB | 2.96 - 3.78 Å |
| 2020-05-29 |  |
Single-Particle Cryo-EM of Arabinofuranosyltransferase AftD from Mycobacteria, Mutant R1389S [multiple data sets in TIFF, MRC and MRCS formats] | Tan YZ, Zhang L, Rodrigues J, Zheng RB, Giacometti SI, Rosário AL, Kloss B, Dandey VP, Wei H, Brunton R, Raczkowski AM, Athayde D, Catalão MJ, Pimentel M, Clarke OB, Lowary TL, Archer M, Niederweis M, Potter CS, Carragher B, Mancia F [Pubmed: 32386575] [DOI: 10.1016/j.molcel.2020.04.014] |
2.3 TB | 3.4 - 3.5 Å |
| 2020-05-27 |  |
Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 20,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — |
