Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-12-12 |  |
E.coli RNaseP Holoenzyme with Mg2+ [14025 multi-frame micrographs composed of 40 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
5.6 TB | 3.1 Å |
| 2022-12-12 |  |
E.coli RNaseP ES complex with AU_ptRNA substrate in the presence of Ca2+ [13608 multi-frame micrographs composed of 60 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
8.3 TB | 3.2 Å |
| 2023-10-09 |  |
Cryo-EM SPA datasets for Antibodies 12-16 & 12-19 in complex with prefusion SARS-CoV-2 Spike glycoprotein (K3 movies/.tif files) [multiple data sets in TIFF format] | Casner RG, Shapiro L [Pubmed: 37776849] [DOI: 10.1016/j.immuni.2023.09.003] |
2.6 TB | 3.03 - 3.09 Å |
| 2023-05-26 |  |
Cryo-EM SPA datasets for Antibody 4-33 in complex with prefusion SARS-CoV-2 Spike glycoprotein (K3 movies/.tif files) [6976 multi-frame micrographs composed of 60 frames each in TIFF format] | Casner RG, Reddem ER, Shapiro L [Pubmed: 37776849] [DOI: 10.1016/j.immuni.2023.09.003] |
1.8 TB | 3.53 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I bound to the end of p3SLR30 (+AMPPNP) [2744 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.5 TB | 3.3 Å |
| 2023-07-07 |  |
Cryo-EM SPA dataset for Antibody SKV09 in complex with VEEV VLP (K3 movies/.tif files) [5595 multi-frame micrographs composed of 40 frames each in TIFF format] | Casner RG [Pubmed: 37295404] [DOI: 10.1016/j.cell.2023.05.019] |
776.7 GB | 6.0 Å |
| 2023-01-31 |  |
Cryo-EM micrographs of APOBEC3G bound to HIV-1 Vif in comblex with CBF-beta and CUL5 E3 ligase [11803 multi-frame micrographs composed of 2051 frames each in EER format] | Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS [Pubmed: 36598981] [DOI: 10.1126/sciadv.ade3168] |
11.4 TB | 3.57 - 5.4 Å |
| 2022-12-12 |  |
E.coli RNaseP ES complex with GG_ptRNA substrate in the presence of Ca2+ [14541 multi-frame micrographs composed of 60 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
8.9 TB | 3.4 Å |
| 2023-10-13 |  |
cryo-EM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167 [20590 micrographs in MRC format] | Bajic G [Pubmed: 38054729] [DOI: 10.1128/mbio.02477-23] |
1.8 TB | 3.16 Å |
| 2022-12-16 |  |
Amyloid fibril structure from the vascular variant of systemic AA amyloidosis [multiple data sets in TIFF format] | Banerjee S, Baur J, Daniel C, Pfeiffer PB, Hitzenberger M, Kuhn L, Wiese S, Bijzet J, Haupt C, Amann KU, Zacharias M, Hazenberg BPC, Westermark GT, Schmidt M, Fändrich M [Pubmed: 36433936] [DOI: 10.1038/s41467-022-34636-4] |
1009.8 GB | 2.56 Å |
| 2023-06-05 |  |
Cryo electron microscopy of Mce1 transporter from Mycobacterium smegmatis [multiple data sets in TIFF format] | Chen J, Bhabha G, Ekiert D [Pubmed: 37495693] [DOI: 10.1038/s41586-023-06366-0] |
20.9 TB | 2.71 - 3.19 Å |
| 2023-08-18 |  |
Mouse heavy chain apoferritin in vitreous ice after plunge-freezing [4745 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
1023.1 GB | 1.61 Å |
| 2023-01-18 |  |
Organizing Structural Principles of the Interleukin-17 Ligand-Receptor Axis [multiple data sets in TIFF format] | Caveney NA, Wilson SC, Garcia KC [Pubmed: 35863378] [DOI: 10.1038/s41586-022-05116-y] |
17.7 TB | 2.5 - 4.4 Å |
| 2023-02-13 |  |
Spinacia oleracea endogenous cytochrome b6f complex [7651 multi-frame micrographs composed of 40 frames each in TIFF format] | Jaciuk M, Koziej L, Pintscher S, Indyka P, Rawski M, Glatt S [Pubmed: 36638176] [DOI: 10.1126/sciadv.add9688] |
2.9 TB | 2.13 Å |
| 2023-01-30 |  |
Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer annealed duplex [2038 multi-frame micrographs composed of 36 frames each in MRC format] | Bell CE [Pubmed: 36543802] [DOI: 10.1038/s41467-022-35572-z] |
1.6 TB | 3.4 Å |
| 2023-01-31 |  |
Cryo-EM structure of a delivery complex containing the SspB adaptor, an ssrA-tagged substrate, and the AAA+ ClpXP protease [9524 multi-frame micrographs composed of 40 frames each in TIFF format] | Ghanbarpour A, Fei X, Baker TA, Davis JH, Sauer RT [DOI: 10.1101/2022.11.06.515074] |
4.0 TB | 3.7 Å |
| 2023-01-16 |  |
Structure of the active Gi-coupled human lysophosphatidic acid receptor 1 complexed with a potent agonist [6228 multi-frame micrographs composed of 48 frames each in TIFF format] | Akasaka H, Tanaka T, Sano FK, Matsuzaki Y, Shihoya W, Nureki O [Pubmed: 36109516] [DOI: 10.1038/s41467-022-33121-2] |
1.4 TB | 3.5 - 5.6 Å |
| 2023-01-16 |  |
Cryo-EM structures of the β3 adrenergic receptor bound to solabegron and isoproterenol [multiple data sets in TIFF format] | Nagiri C, Kobayashi K, Tomita A, Kato M, Yamashita K, Nishizawa T, Inoue A, Shihoya W, Nureki O [Pubmed: 35489202] [DOI: 10.1016/j.bbrc.2022.04.065] |
2.5 TB | 3.3 - 3.9 Å |
| 2023-01-16 |  |
Dog beta3 adrenergic receptor bound to mirabegron in complex with a miniGs heterotrimer [2864 multi-frame micrographs composed of 48 frames each in TIFF format] | Nagiri C, Kobayashi K, Tomita A, Kato M, Yamashita K, Nishizawa T, Inoue A, Shihoya W, Nureki O [Pubmed: 34314699] [DOI: 10.1016/j.molcel.2021.06.024] |
671.1 GB | 3.16 Å |
| 2023-01-16 |  |
Structure of RecT protein from Listeria innoccua phage A118 in complex with 83-mer single stranded DNA [1619 multi-frame micrographs composed of 45 frames each in TIFF format] | Bell CE [Pubmed: 36543802] [DOI: 10.1038/s41467-022-35572-z] |
822.3 GB | 4.5 Å |
| 2023-01-30 |  |
Single particle cryo-EM dataset for E. coli MlaFEDB bound to MlaC [multiple data sets in MRC and TIFF formats] | MacRae MR, Coudray N, Bhabha G, Ekiert DC [Pubmed: 37100290] [DOI: 10.1016/j.jbc.2023.104744] |
5.0 TB | 6.6 Å |
| 2023-11-07 |  |
The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro [2351 multi-frame micrographs composed of 20 frames each in MRC format] | Weckener M, Woodward LS, Clarke BR, Liu H, Ward PN, Le Bas A, Bhella D, Whitfield C, Naismith JH [Pubmed: 36944376] [DOI: 10.1098/rsob.220373] |
273.6 GB | 3.6 Å |
| 2024-01-15 |  |
Cryo-EM structure NDUFS4 knockout complex I from Mus musculus heart [7310 multi-frame micrographs composed of 25 frames each in TIFF format] | Yin Z, Agip ANA, Bridges HR, Hirst J [Pubmed: 38177503] [DOI: 10.1038/s44318-023-00001-4] |
3.2 TB | 3.2 - 4.3 Å |
| 2023-02-14 |  |
Single-particle cryo–negative-stain EM dataset of the compact conformer of kinesin-1 (Kif5C/KLC1) [multiple data sets in TIFF format] | Weijman JF, Yadav SKN, Surridge KJ, Cross JA, Borucu U, Mantell J, Woolfson DN, Schaffitzel C, Dodding MP [Pubmed: 36112680] [DOI: 10.1126/sciadv.abp9660] |
1.7 TB | 29.1 Å |
| 2023-01-20 |  |
Movies for human CST-Pola-primase bound to 3xTEL DNA template [6252 multi-frame micrographs composed of 40 frames each in TIFF format] | He Q, Lin X, Chavez BL, Agrawal S, Lusk BL, Lim C [Pubmed: 35830881] [DOI: 10.1038/s41586-022-05040-1] |
1.5 TB | 3.61 - 3.62 Å |
