Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-08-18 |  |
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
580.8 GB | 3.2 Å |
| 2023-08-18 |  |
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP (200 kV) [3527 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
664.6 GB | 3.6 Å |
| 2023-08-18 |  |
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
1.9 TB | 3.8 Å |
| 2023-08-18 |  |
Cryo-EM structure of the wild-type solitary ECF module in DDM micelles in the ATPase open and nucleotide-free conformation (200 kV) [1862 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
360.8 GB | 4.3 Å |
| 2023-09-06 |  |
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation (300 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
4.4 TB | 2.6 Å |
| 2023-03-14 |  |
LRRC8A-BRIL:C Heteromer in lipid nanodiscs [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.4 TB | 3.17 - 3.48 Å |
| 2023-02-17 |  |
Principles of mitoribosomal small subunit assembly in eukaryotes [multiple data sets in TIFF format] | Harper NJ, Burnside C, Klinge S [Pubmed: 36482135] [DOI: 10.1038/s41586-022-05621-0] |
73.6 TB | 2.36 - 3.8 Å |
| 2022-12-19 |  |
CLEMSite, a software for automated phenotypic screens using light microscopy and FIB-SEM. [multiple data sets in TIFF format] | Lleti JMSL, Steyer AMS, Schwab YS | 19.7 GB | — |
| 2022-12-05 |  |
CryoEM micrographs of a group II intron retroelement in complex with its structured DNA target (holoRNP) [multiple data sets in TIFF format] | Chung KC, Xu LX, Pyle AMP [Pubmed: 36356138] [DOI: 10.1126/science.abq2844] |
5.6 TB | 2.8 Å |
| 2022-11-29 |  |
CryoEM micrographs of a group II intron retroelement (apoRNP) [8005 multi-frame micrographs composed of 40 frames each in TIFF format] | Chung KC, Xu LX, Pyle AMP [Pubmed: 36356138] [DOI: 10.1126/science.abq2844] |
3.1 TB | 3.1 Å |
| 2023-05-17 |  |
Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling - dataset2 [10537 multi-frame micrographs composed of 40 frames each in TIFF format] | Hillen HS [Pubmed: 34135319] [DOI: 10.1038/s41467-021-23702-y] |
2.2 TB | 2.7 - 2.9 Å |
| 2023-11-07 |  |
Tau filaments from the cellular fraction of Alzheimer's disease patient brain [12117 multi-frame micrographs composed of 40 frames each in TIFF format] | Ryskeldi-Falcon BR-F, Behr TSB [Pubmed: 37163117] [DOI: 10.1101/2023.04.30.537820] |
1.9 TB | 3.27 Å |
| 2023-07-18 |  |
Purified tails from bacteriophage T5 [3208 multi-frame micrographs composed of 40 frames each in MRC format] | Linares R, Arnaud CA, Effantin G, Darnault C, Epalle NH, Boeri Erba E, Schoehn G, Breyton C [Pubmed: 36961893] [DOI: 10.1126/sciadv.ade9674] |
7.5 TB | 3.45 - 4.22 Å |
| 2023-03-14 |  |
LRRC8A-BRIL(T48D):C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.1 TB | 3.1 - 4.32 Å |
| 2023-01-18 |  |
Multishot Tomography for High-Resolution In Situ Subtomogram Averaging: RiboProt singleshot [39 tilt series in MRC format] | Khavnekar S, Erdmann PSE, Plitzko J [Pubmed: 36343843] [DOI: 10.1016/j.jsb.2022.107911] |
122.2 GB | 4.7 - 7.8 Å |
| 2023-04-27 |  |
Lloviu cuevavirus nucleoprotein RNA complex [multiple data sets in TIFF format] | Hu S, Fujita-Fujiharu Y, Sugita Y, Wendt L, Muramoto Y, Nakano M, Hoenen T, Noda T [DOI: 10.1093/pnasnexus/pgad120] |
4.4 TB | 3.0356 Å |
| 2023-01-18 |  |
Multishot Tomography for High-Resolution In Situ Subtomogram Averaging: RiboProt multishot (2 shots) [26 tilt series in MRC format] | Khavnekar S, Erdmann PSE, Plitzko J [Pubmed: 36343843] [DOI: 10.1016/j.jsb.2022.107911] |
78.0 GB | 4.7 - 8.3 Å |
| 2023-01-18 |  |
Multishot Tomography for High-Resolution In Situ Subtomogram Averaging: E.coli cryo-FIB lamellae multishot [30 tilt series in MRC format] | Khavnekar S, Erdmann PS, Plitzko JM [Pubmed: 36343843] [DOI: 10.1016/j.jsb.2022.107911] |
90.7 GB | 8.8 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p3dsRNA [3480 multi-frame micrographs composed of 34 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1020.2 GB | 3.54 Å |
| 2024-02-01 |  |
Purified tails from bacteriophage T5 after interaction with E. coli receptor FhuA inserted into nanodiscs - dataset 2 [5733 multi-frame micrographs composed of 40 frames each in MRC format] | Linares R, Arnaud C, Effantin G, Darnault C, Epalle NH, Erba EB, Schoehn G, Breyton C [Pubmed: 36961893] [DOI: 10.1126/sciadv.ade9674] |
917.9 GB | 3.45 - 4.32 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I bound to the end and internal sites of p3SLR30 (+ATP) [3417 multi-frame micrographs composed of 40 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.2 TB | 3.2 - 3.66 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p1dsRNA [2460 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.3 TB | 3.54 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with OHdsRNA [2838 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.5 TB | 3.5 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p2dsRNA [2586 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.4 TB | 3.2 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I bound to the end and internal sites of OH3SLR30 (+ATP) [3663 multi-frame micrographs composed of 53 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.6 TB | 2.9 - 3.0 Å |
