Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-02-01 |  |
CryoET tilt series of mouse sperm flagella after FIB-SEM milling [69 tilt series in MRC format] | Chen Z, Greenan GA, Shiozaki M, Liu Y, Skinner WM, Zhao X, Zhao S, Yan R, Guo C, Yu Z, Lishko PV, Agard DA, Vale RD [Pubmed: 36593309] [DOI: 10.1038/s41594-022-00861-0] |
194.0 GB | 25.0 Å |
| 2023-02-01 |  |
Single particle cryogenic electron micrographs of respiratory supercomplex I+III2 from Vigna radiata [multiple data sets in TIFF format] | Maldonado M, Letts JA [Pubmed: 36581760] [DOI: 10.1038/s41477-022-01306-8] |
16.4 TB | 3.2 Å |
| 2023-02-03 |  |
Cryo-electron tomography on plasma FIB lamellae of HeLa cells [6481 tilt series in EER format] | Berger C, Dumoux M, Glen T, Yee NB, Mitchels JM, Patáková Z, Darrow MC, Naismith JH, Grange M [Pubmed: 36746945] [DOI: 10.1038/s41467-023-36372-9] |
622.2 GB | 4.9 Å |
| 2023-02-06 |  |
D-cycloserine and glutamate bound human GluN1a-GluN2C NMDA receptor [15350 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
2.9 TB | 3.71 - 3.96 Å |
| 2023-02-06 |  |
D-cycloserine and glutamate bound human GluN1a-GluN2C NMDA receptor in nanodisc [4714 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
1007.2 GB | 3.28 - 3.75 Å |
| 2023-02-06 |  |
Human GluN1a-GluN2A-GluN2C triheteromeric NMDA receptor in complex with a nanobody [16468 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
2.8 TB | 4.24 Å |
| 2023-02-06 |  |
dephosphorylated human ryanodine receptor type 2 RyR2 [10954 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.4 TB | 2.83 - 3.59 Å |
| 2023-02-06 |  |
PKA-phosphorylated human ryanodine receptor type 2 RyR2 [14778 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.8 TB | 3.11 Å |
| 2023-02-08 |  |
PKA-phosphorylated human ryanodine receptor type 2 in the presence of calmodulin - RyR2 + CaM [13426 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
3.0 TB | 2.68 - 3.69 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S - RyR2-R2474S [10671 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.3 TB | 2.58 - 3.29 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S in the presence of Rycal ARM210 - RyR2-R2474S + ARM210 [11749 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.4 TB | 2.99 - 3.29 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S in the presence of calmodulin - RyR2-R2474S + CaM [12685 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.8 TB | 2.93 - 2.97 Å |
| 2023-02-10 |  |
A surface morphometrics toolkit to quantify organellar membrane ultrastructure using cryo-electron tomography [multiple data sets in MRC format] | Barad BA, Medina M, Fuentes D, Wiseman RL, Grotjahn DA [DOI: 10.1101/2022.01.23.477440] |
126.9 GB | — |
| 2023-02-13 |  |
Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs) [multiple data sets in MRC format] | Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP | 8.3 TB | 3.92 Å |
| 2023-02-13 |  |
Nudaurelia capensis omega virus maturation intermediates captured at pH5.6 (insect cell expressed VLPs) [multiple data sets in MRC format] | Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP | 13.7 TB | 4.8 Å |
| 2023-02-13 |  |
Spinacia oleracea endogenous cytochrome b6f complex [7651 multi-frame micrographs composed of 40 frames each in TIFF format] | Jaciuk M, Koziej L, Pintscher S, Indyka P, Rawski M, Glatt S [Pubmed: 36638176] [DOI: 10.1126/sciadv.add9688] |
2.9 TB | 2.13 Å |
| 2023-02-13 |  |
Tobacco mosaic virus, imaged on a JEOL CRYOARM 300 and Direct Electron Apollo [3402 multi-frame micrographs composed of 45 frames each in TIFF format] | Bhella D, Love AJ, Streetley J, Taliansky M, McGeachy K, Bukharova T | 1.1 TB | 1.85 Å |
| 2023-02-13 |  |
Cryo-EM snapshots of Eukaryotic Membrane Proteins in Native Lipid-Bilayer Nanodiscs [multiple data sets in MRC format] | Janson K, Kyrilis FL, Tueting C, Hamdi F, Kastritis PL [Pubmed: 36399657] [DOI: 10.1021/acs.biomac.2c00935] |
5.7 TB | 4.73 - 18.59 Å |
| 2023-02-14 |  |
Nudaurelia capensis omega virus procapsid at pH7.6 (insect cell expressed VLPs) [multiple data sets in MRC format] | Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP | 8.5 TB | 4.88 Å |
| 2023-02-14 |  |
Nudaurelia capensis omega virus maturation intermediate captured at pH6.25 (insect cell expressed VLPs) [multiple data sets in MRC format] | Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP | 8.6 TB | 4.8 Å |
| 2023-02-14 |  |
Single-particle cryo–negative-stain EM dataset of the compact conformer of kinesin-1 (Kif5C/KLC1) [multiple data sets in TIFF format] | Weijman JF, Yadav SKN, Surridge KJ, Cross JA, Borucu U, Mantell J, Woolfson DN, Schaffitzel C, Dodding MP [Pubmed: 36112680] [DOI: 10.1126/sciadv.abp9660] |
1.7 TB | 29.1 Å |
| 2023-02-14 |  |
Slx9-TAP associated immature ribosomal particles from S. cerevisiae depleted of rpS21 [6463 multi-frame micrographs composed of 40 frames each in TIFF format] | Milkereit P, Pöll G [Pubmed: 36996028] [DOI: 10.1371/journal.pone.0283698] |
1.1 TB | 3.3 Å |
| 2023-02-14 |  |
Mycobacterium phage Ogopogo [2220 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.4 TB | 2.7 Å |
| 2023-02-14 |  |
Microbacterium phage Oxtober96 [10437 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
2.7 TB | 2.2 Å |
| 2023-02-15 |  |
Structural basis of a transcription pre-initiation complex on a divergent promoter [51 tilt series in TIFF format] | Gorbea Colón JJ, Palao L, Chen SF, Kim HJ, Snyder L, Chang YW, Tsai KL, Murakami K [Pubmed: 36731470] [DOI: 10.1016/j.molcel.2023.01.011] |
151.3 GB | 26.0 Å |
