EMPIAR-11060 - Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs) [multiple data sets in MRC format]

EMPIAR-11060

Nudaurelia capensis omega virus maturation intermediate captured at pH5.9 (insect cell expressed VLPs) [multiple data sets in MRC format]

Publication:

Decoding virus maturation with cryo-EM structures of intermediates

Castells-Graells R, Hesketh EL, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP

(---)

Related EMDB entry:

EMD-15112

Deposited:

2022-06-08

Released:

2023-02-13

Last modified:

2023-02-13

Imageset size:

8.26 TB

Imageset DOI:

10.6019/EMPIAR-11060

Experimental metadata:

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Compressed by PDBj:

Image formats and pixel types shown below are those of the original, non-compressed files.

MRC movies (FoilHole*Fractions.mrc) in this entry were compressed by bzip2 (pbzip2)
by EMPIAR Japan to save space and bandwidth.

Some programs (e.g. RELION >= 4.0.1 and CryoSPARC) can process compressed movies without explicit
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Original size:   12,792,309,530 kilobytes
Compressed size:  7,871,574,089 kilobytes

Contains:

micrographs - multiframe
micrographs - single frame

Image Sets

1. unaligned movies

Category:

micrographs - multiframe

Image format:

MRC

No. of images or tilt series:

10010

Image size:

(4096, 4096)

Pixel type:

SIGNED 16 BIT INTEGER

Pixel spacing:

(1.065, 1.065)

Details:

Micrographs are unaligned movies comprised of 39 frames each (accumulating 46 electron per squared Angstrom in a 1 second exposure)

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2. aligned and dose-weighted micrographs

Category:

micrographs - single frame

Image format:

MRC

No. of images or tilt series:

10010

Image size:

(4096, 4096)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(1.065, 1.065)

Details:

Micrographs are averages of aligned and dose-weighted movies

Files:

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Download a list of selected files.

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Citations

Structural basis for HIV-1 antagonism of host APOBEC3G via Cullin E3 ligase.

Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS. (2023)

The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection.

Rigden DJ, Fernández XM. (2023)

EMPIAR: the Electron Microscopy Public Image Archive.

Iudin A, Korir PK, Somasundharam S, Weyand S, Cattavitello C, Fonseca N, Salih O, Kleywegt GJ, Patwardhan A. (2023)

CLEMSite, a software for automated phenotypic screens using light microscopy and FIB-SEM.

Serra Lleti JM, Steyer AM, Schieber NL, Neumann B, Tischer C, Hilsenstein V, Holtstrom M, Unrau D, Kirmse R, Lucocq JM, Pepperkok R, Schwab Y. (2023)

Structure of a RecT/Redβ family recombinase in complex with a duplex intermediate of DNA annealing.

Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE. (2022)

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