Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [4490 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
273.8 GB | — |
| 2023-11-07 |  |
The lipid linked oligosaccharide polymerase Wzy and its regulating co-polymerase Wzz form a complex in vivo and in vitro [2351 multi-frame micrographs composed of 20 frames each in MRC format] | Weckener M, Woodward LS, Clarke BR, Liu H, Ward PN, Le Bas A, Bhella D, Whitfield C, Naismith JH [Pubmed: 36944376] [DOI: 10.1098/rsob.220373] |
273.6 GB | 3.6 Å |
| 2014-11-06 |  |
Yeast 80S Ribosome-Taura Syndrome Virus IRES complex, Frealign Input Particle Stack [stack of 416312 particles in MRC format] | Koh CS, Brilot AF, Grigorieff N, Korostelev AA [Pubmed: 24927574] [DOI: 10.1073/pnas.1406335111] |
273.6 GB | 6.1 Å |
| 2021-10-18 |  |
Drug-free A. baumannii MsbA [6113 micrographs in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
268.4 GB | 5.2 Å |
| 2023-08-18 |  |
AP2 in the presence of heparin [3046 micrographs in MRC format] | Partlow EA, Cannon KS, Hollopeter G, Baker RW [Pubmed: 35347313] [DOI: 10.1038/s41594-022-00749-z] |
267.5 GB | 3.5 - 3.9 Å |
| 2021-09-28 |  |
A. baumannii MsbA in complex with TBT1 [6083 micrographs in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
267.1 GB | 3.97 Å |
| 2018-10-23 |  |
bovine liver glutamate dehydrogenase [4982 micrographs in MRC format] | Eng ET, Kelley K, Jordan KJ, Kopylov M, Carragher BO, Potter CS | 264.5 GB | 2.1 Å |
| 2022-12-09 |  |
CryoEM structure of hM4Di-miniGo in complex with DCZ [2982 micrographs in MRC format] | Fay J, Roth B, Zhang S [Pubmed: 36450989] [DOI: 10.1038/s41586-022-05489-0] |
261.8 GB | 2.7 Å |
| 2013-07-06 |  |
S.cereviseae 80S ribosome direct electron detetector dataset [260 multi-frame micrographs composed of 16 frames each in MRCS format] | Bai XC, Fernandez IS, McMullan G, Scheres SH [Pubmed: 23427024] [DOI: 10.7554/eLife.00461] |
260.0 GB | 4.5 Å |
| 2023-10-03 |  |
Single particle cryo-EM dataset of mitochondrial complex I from Mus musculus inhibited by IACS-2858 - 3 [1593 multi-frame micrographs composed of 1 frames each in MRC format] | Chung I, Hirst J [Pubmed: 33990335] [DOI: 10.1126/sciadv.abg4000] |
259.2 GB | 3.04 Å |
| 2020-12-22 |  |
Single-particle Cryo-EM of the endogenous human BAF complex alone [4865 micrographs in MRC format] | Suzuki H, Mashtalir N, Kadoch C, Walz T [Pubmed: 33053319] [DOI: 10.1016/j.cell.2020.09.051] |
258.1 GB | 7.8 Å |
| 2021-09-24 |  |
A microtubule RELION-based pipeline for cryo-EM image processing [multiple data sets in TIFF format] | Cook AD, Manka SW, Wang S, Moores CA, Atherton J [Pubmed: 31610239] [DOI: 10.1016/j.jsb.2019.10.004] |
256.7 GB | 4.2 Å |
| 2022-10-10 |  |
Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire [965 multi-frame micrographs composed of 45 frames each in TIFF format] | Strauss M [Pubmed: 31240257] [DOI: 10.1038/s42003-019-0448-9] |
256.6 GB | 3.4 Å |
| 2020-03-20 |  |
Cryo Electron Tomograms of Membrane Fractions of Rabbit Skeletal Muscle for Structural Determination of RyR1 in SR Vesicles [82 tilt series in MRC format] | Chen W, Kudryashev M [Pubmed: 32147968] [DOI: 10.15252/embr.201949891] |
254.2 GB | 12.6 - 38.0 Å |
| 2022-12-09 |  |
CryoEM structure of hM3R-miniGq in complex with Iperoxo [2858 micrographs in MRC format] | Fay J, Roth B, Zhang S [Pubmed: 36450989] [DOI: 10.1038/s41586-022-05489-0] |
250.9 GB | 2.56 Å |
| 2022-09-26 |  |
In situ cryo-electron tomography of autophagic structures in S. cerevisiae [84 tilt series in MRC format] | Bieber A, Capitanio C, Erdmann PS, Schulman BA, Baumeister W, Wilfling F [Pubmed: 36122245] [DOI: 10.1073/pnas.2209823119] |
249.0 GB | — |
| 2020-07-24 |  |
Human delta protocadherin 1 full ectodomains on membranes, tomogram 1 [multiple data sets in MRC format] | Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 32101743] [DOI: 10.1016/j.celrep.2020.02.003] |
247.7 GB | — |
| 2018-05-11 |  |
Rabbit muscle aldolase movies obtained using Talos Arctica operating at 200 kV equipped with a K2 [663 multi-frame micrographs composed of 44 frames each in MRC format] | Herzik Jr MA, Wu M, Lander GC [Pubmed: 28991891] [DOI: 10.1038/nmeth.4461] |
244.7 GB | 2.6 Å |
| 2023-10-03 |  |
In situ cryo-electron tomography of E. amylovora cells infected by the jumbo bacteriophage RAY [multiple data sets in TIFF format] | Prichard A, Lee J, Laughlin TG, Lee A, Thomas KP, Sy A, Spencer T, Asavavimol A, Cafferata A, Cameron M, Chiu N, Davydov D, Desai I, Diaz G, Guereca M, Hearst K, Huang L, Jacobs E, Johnson A, Kahn S, Koch R, Martinez A, Norquist M, Pau T, Prasad G, Saam K, Sandhu M, Sarabria AJ, Schumaker S, Sonin S, Sonin A, Uyeno A, Zhao A, Corbett K, Pogliano K, Meyer J, Grose JH, Villa E, Dutton R, Pogliano J [Pubmed: 36865095] [DOI: 10.1101/2023.02.24.529968] |
244.3 GB | 8.9 - 38.0 Å |
| 2018-01-22 |  |
Cryo-EM structure of the TMEM16A in LMNG [multiple data sets in MRCS format] | Dang S, Cheng Y [Pubmed: 29236684] [DOI: 10.1038/nature25024] |
244.2 GB | 3.8 Å |
| 2021-05-07 |  |
Affinity-purified VgaA-LC in complex with 70S ribosomes from Staphylococcus aureus [3348 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
241.0 GB | 3.1 Å |
| 2023-04-26 |  |
Cryo-electron tomography of ChAdOx spikes HexaPro mutant [68 tilt series in MRC format] | Ni T, Mendonca L, Zhu Y, Howe A, Radecke J, Sheng Y, Krebs AS, Shah P, Allen E, Spencer A, Morris S, Stuart D, Gilbert S, Zhang P | 240.3 GB | 9.0 - 10.6 Å |
| 2020-09-25 |  |
A "drug sweeping" state of the TriABC triclosan efflux pump from Pseudomonas aeruginosa [multiple data sets in MRCS format] | Fabre L, Abigail LT, Ntreh AT, Amira A, Yazidi A, Inga IV, Weeks JW, Leus IV, Jon JW, Sudipta S, Ruickoldt J, Jakob J, Rouiller I, Zgurskaya HI, Isabelle I, Sygusch J, Helen HI, Jurgen J [Pubmed: 32966762] [DOI: 10.1016/j.str.2020.09.001] |
238.7 GB | 4.3 - 20.0 Å |
| 2018-07-06 |  |
Structure of the herpes-simplex virus portal-vertex [3818 micrographs in MRC format] | McElwee M, Vijayakrishnan S, Rixon FJ, Bhella D [Pubmed: 29924793] [DOI: 10.1371/journal.pbio.2006191] |
238.6 GB | 7.7 Å |
| 2018-02-07 |  |
Raw 2d tomographic tilt series of a dividing cell [65 tilt series in ST format] | Otsuka S [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
237.8 GB | — |
