Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-01-19 |  |
Human heparan sulfate polymerase complex EXT1-EXT2 [7046 micrographs in MRC format] | Leisico F, Omeiri J, Hons M, Schoehn G, Lortat-Jacob H, Wild R [Pubmed: 36402845] [DOI: 10.1038/s41467-022-34882-6] |
618.7 GB | 2.8 Å |
| 2022-09-20 |  |
Cryo-EM structure of Cas13bt3–guide RNA–target RNA complex [2772 multi-frame micrographs composed of 48 frames each in TIFF format] | Nakagawa R, Kannan S, Altae-Tran H, Takeda SN, Tomita A, Hirano H, Kusakizako T, Nishizawa T, Yamashita K, Zhang F, Nishimasu H, Nureki O [Pubmed: 36027912] [DOI: 10.1016/j.molcel.2022.08.001] |
616.9 GB | 3.38 Å |
| 2023-03-27 |  |
Cryo electron microscopy of beta-2-microglobulin amyloid fibrils for the variant deltaN6 (in vitro, pH 6.2) [4095 multi-frame micrographs composed of 28 frames each in TIFF format] | Wilkinson M, Gallardo RU, Martinez RM, Guthertz N, So M, Aubrey LD, Radford SE, Ranson NA [Pubmed: 36864041] [DOI: 10.1038/s41467-023-36791-8] |
616.1 GB | 3.0 - 3.4 Å |
| 2023-10-17 |  |
Cryo-EM structure of human Anion Exchanger 1 [7009 multi-frame micrographs composed of 40 frames each in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
615.4 GB | 2.99 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compound 40q [895 multi-frame micrographs composed of 75 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
614.9 GB | 2.9 Å |
| 2018-02-26 |  |
Cryo-EM reconstruction of a modified human Adenovirus C5 [231 multi-frame micrographs composed of 50 frames each in MRC format] | Schmid M, Ernst P, Honegger A, Suomalainen M, Zimmermann M, Braun L, Stauffer S, Thom C, Dreier B, Eibauer M, Kipar A, Vogel V, Greber UF, Medalia O, Plückthun A [Pubmed: 29386504] [DOI: 10.1038/s41467-017-02707-6] |
612.7 GB | 7.4 Å |
| 2016-02-04 |  |
Volta phase plate cryo-EM of the small protein complex Prx3 [multiple data sets in MRC and dat formats] | Khoshouei MK [Pubmed: 26817416] [DOI: 10.1038/ncomms10534] |
612.5 GB | 4.4 Å |
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase bound to its 5' viral RNA [2547 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] |
608.2 GB | 3.23 Å |
| 2020-10-16 |  |
Tilt-series from cryo-lamellae of WT S. cerevisiae cells [multiple data sets in MRC format] | Allegretti M, Zimmerli CE, Rantos V, Wilfling F, Ronchi P, Fung HKH, Lee CW, Hagen W, Turoňová B, Karius K, Börmel M, Zhang X, Müller CW, Schwab Y, Mahamid J, Pfander B, Kosinski J, Beck M [Pubmed: 32879490] [DOI: 10.1038/s41586-020-2670-5] |
605.7 GB | 25.0 Å |
| 2019-10-07 |  |
Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [4529 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
605.2 GB | — |
| 2020-08-11 |  |
Human CALHM2 in nanodisc, 1 mM EDTA [2328 multi-frame micrographs composed of 50 frames each in TIFF format] | Syrjanen JL, Michalski K, Chou TH, Grant T, Rao S, Simorowski N, Tucker SJ, Grigorieff N, Furukawa H [Pubmed: 31988524] [DOI: 10.1038/s41594-019-0369-9] |
604.3 GB | 3.68 Å |
| 2024-04-17 |  |
CryoEM movies of IAPP-S20G timecourse (22 week, FT14) [4373 multi-frame micrographs composed of 40 frames each in TIFF format] | Wilkinson M, Xu Y, Thacker D, Taylor AIP, Fisher DG, Gallardo RU, Radford SE, Ranson NA [Pubmed: 38134875] [DOI: 10.1016/j.cell.2023.11.025] |
602.0 GB | 2.2 - 3.1 Å |
| 2020-07-28 |  |
Human delta protocadherin 10 full ectodomains on membranes, tomogram 1 [multiple data sets in TIFF and MRC formats] | Harrison OJ, Brasch J, Katsamba PS, Ahlsen G, Noble AJ, Dan H, Sampogna R, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 32101743] [DOI: 10.1016/j.celrep.2020.02.003] |
599.5 GB | — |
| 2022-09-27 |  |
Cryo-EM structure of cyanobacterial PSI in presence of Gallium-substituted ferredoxin (GaFd) [3018 multi-frame micrographs composed of 48 frames each in TIFF format] | Li J, Hamaoka N, Makino F, Kawamoto A, Lin Y, Rögner M, Nowaczyk MM, Lee YH, Namba K, Gerle C, Kurisu G [Pubmed: 36097054] [DOI: 10.1038/s42003-022-03926-4] |
598.2 GB | 1.97 Å |
| 2022-07-27 |  |
PMCA-amplified α-synuclein fibrils, Parkinson's Disease patient-derived seeds [6780 micrographs in MRC format] | Frieg B, Geraets JA, Schröder GF | 595.3 GB | 3.3 Å |
| 2021-03-03 |  |
Cryo electron microscopy of alpha-synuclein H50Q fibrils [3577 multi-frame micrographs composed of 30 frames each in MRC format] | Boyer DR, Li B, Sun C, Fan W, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 31695184] [DOI: 10.1038/s41594-019-0322-y] |
595.3 GB | 3.3 Å |
| 2023-02-28 |  |
SARS-CoV-2 spike protein (1-up RBD) on Quantifoil grid [2403 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
594.8 GB | 3.23 Å |
| 2021-04-06 |  |
Metavinculin ABD-F-actin complex [1818 multi-frame micrographs composed of 40 frames each in TIFF format] | Mei L, Alushin GM [Pubmed: 32969337] [DOI: 10.7554/eLife.62514] |
593.0 GB | 2.9 Å |
| 2013-08-26 |  |
HIV-1 envelope glycoprotein trimer micrographs [multiple data sets in SPIDER format] | Mao Y, Wang L, Gu C, Herschhorn A, Désormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
586.8 GB | 6.0 Å |
| 2021-01-29 |  |
Cryo-EM dataset of human pre-Bact spliceosome [multiple data sets in MRC format] | Townsend C, Leelaram MN, Agafonov DE, Dybkov O, Will CL, Bertram K, Urlaub H, Kastner B, Stark H, Lührmann R [Pubmed: 33243851] [DOI: 10.1126/science.abc3753] |
584.5 GB | 3.9 - 8.0 Å |
| 2023-10-23 |  |
The cryo-EM structure of the human DNMT3A2-DNMT3B3 complex bound to NCP_Kc36me3. [1504 multi-frame micrographs composed of 40 frames each in TIFF format] | Xu TH, Liu M, Zhou EX, Liang G, Zhao G, Xu HE, Melcher K, Jones PA [Pubmed: 32968275] [DOI: 10.1038/s41586-020-2747-1] |
583.5 GB | 4.26 Å |
| 2023-08-18 |  |
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
580.8 GB | 3.2 Å |
| 2021-11-30 |  |
Rabbit Muscle Aldolase 20% glycerol, 300kV [2608 multi-frame micrographs composed of 50 frames each in TIFF format] | Basanta B, Hirschi M, Lander GC [Pubmed: 34981768] [DOI: 10.1107/S2059798321012110] |
580.1 GB | 4.6 Å |
| 2015-10-13 |  |
Cryo-EM reveals the conformation of a substrate analogue in the human 20S proteasome core [545 multi-frame micrographs composed of 17 frames each in MRC format] | da Fonseca PCA, Morris EP [Pubmed: 26133119] [DOI: 10.1038/ncomms8573] |
579.1 GB | 3.5 Å |
| 2019-11-07 |  |
Cryo-EM structure of calcium-bound TMEM16F in nanodisc with supplement of PIP2 [stack of 3823 particles in MRCS format] | Feng S, Jan LY, Cheng Y [Pubmed: 31291589] [DOI: 10.1016/j.celrep.2019.06.023] |
576.6 GB | 3.2 - 3.3 Å |
