Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-09-27 |  |
Cryo-EM structure of cyanobacterial PSI in presence of Gallium-substituted ferredoxin (GaFd) [3018 multi-frame micrographs composed of 48 frames each in TIFF format] | Li J, Hamaoka N, Makino F, Kawamoto A, Lin Y, Rögner M, Nowaczyk MM, Lee YH, Namba K, Gerle C, Kurisu G [Pubmed: 36097054] [DOI: 10.1038/s42003-022-03926-4] |
598.2 GB | 1.97 Å |
| 2022-01-28 |  |
CryoET of presequence protease single particle [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
25.4 GB | — |
| 2022-01-28 |  |
Anaplastic lymphoma kinase (ALK) extracellular fragment of ligand binding region 648-1025 in complex with AUG-alpha [multiple data sets in TIFF and MRC formats] | Reshetnyak AV, Myasnikov AG, Kalodimos CG [Pubmed: 34819673] [DOI: 10.1038/s41586-021-04140-8] |
10.2 TB | 2.27 Å |
| 2022-03-14 |  |
Cryogenic electron microscopy of somatostatin receptor 2/SST14/Gi3 complex [9740 multi-frame micrographs composed of 50 frames each in TIFF format] | Robertson MJ [Pubmed: 35210615] [DOI: 10.1038/s41594-022-00727-5] |
4.5 TB | 2.5 Å |
| 2022-03-14 |  |
Cryogenic electron microscopy of somatostatin receptor 2/Octreotide/Gi3 complex [7576 multi-frame micrographs composed of 55 frames each in TIFF format] | Robertson MJ, Panova O [Pubmed: 35210615] [DOI: 10.1038/s41594-022-00727-5] |
4.2 TB | 2.7 Å |
| 2022-02-07 |  |
Cryo-EM multiframe micrographs of human Pol kappa complexed with DNA and wildtype PCNA [multiple data sets in TIFF format] | Lancey C, Tehseen M, Bakshi S, Percival M, Takahashi M, Sobhy MA, Raducanu VS, Blair K, Muskett FW, Ragan TJ, Crehuet R, Hamdan SM, De Biasio A [Pubmed: 34667155] [DOI: 10.1038/s41467-021-26251-6] |
4.2 TB | 3.4 Å |
| 2022-02-07 |  |
Cryo-EM multiframe micrographs of human Pol kappa complexed with DNA and monoubiquitylated PCNA [3889 multi-frame micrographs composed of 45 frames each in TIFF format] | Lancey C, Tehseen M, Bakshi S, Percival M, Takahashi M, Sobhy MA, Raducanu VS, Blair K, Muskett FW, Ragan TJ, Crehuet R, Hamdan SM, De Biasio A [Pubmed: 34667155] [DOI: 10.1038/s41467-021-26251-6] |
1.9 TB | 6.4 Å |
| 2022-05-11 |  |
Tilt series and tomograms of cells expressing different non structural proteins (NSPs) of SARS-CoV-2 [multiple data sets in MRC format] | Polshchuk RS, Polishchuk E, De Matteis MA [Pubmed: 35551511] [DOI: 10.1038/s41586-022-04835-6] |
107.1 GB | — |
| 2022-03-29 |  |
Oxytocin receptor (OTR) bound to oxytocin in complex with a heterotrimeric Gq protein [7728 multi-frame micrographs composed of 50 frames each in TIFF format] | Meyerowitz JG, Robertson MJ, Panova O, Skiniotis G [Pubmed: 35241813] [DOI: 10.1038/s41594-022-00728-4] |
4.1 TB | 2.9 Å |
| 2022-03-21 |  |
CryoEM of PreP prepared via Chameleon [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
2.2 TB | 3.3 - 4.6 Å |
| 2022-04-06 |  |
CryoEM Structure of the, UND-PP bound, WaaL O-Antigen Ligase [2378 multi-frame micrographs composed of 50 frames each in MRC format] | Ashraf KU, Nygaard R, Vickery ON, Erramilli SK, Herrera CM, McConville TH, Petrou VI, Giacometti SI, Dufrisne MB, Nosol K, Zinkle AP, Graham CLB, Loukeris M, Kloss B, Skorupinska-Tudek K, Swiezewska E, Roper DI, Clarke OB, Uhlemann AC, Kossiakoff AA, Trent MS, Stansfeld PJ, Mancia F [Pubmed: 35388216] [DOI: 10.1038/s41586-022-04555-x] |
477.2 GB | 3.23 Å |
| 2022-02-07 |  |
Cryo electron microscopy SMARCAD1 with nucleosome in ADP-BeF3 bound state [11235 multi-frame micrographs composed of 60 frames each in TIFF format] | Markert JW, Luger K [Pubmed: 34652950] [DOI: 10.1126/sciadv.abk2380] |
6.2 TB | 6.49 Å |
| 2022-02-24 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å |
| 2022-02-07 |  |
Cryo-EM structure of the folate-specific ECF transporter complex in DDM micelles (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 34408021] [DOI: 10.1073/pnas.2105014118] |
141.7 GB | 3.4 Å |
| 2022-02-08 |  |
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 34408021] [DOI: 10.1073/pnas.2105014118] |
1.1 TB | 2.7 Å |
| 2022-03-08 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å |
| 2022-02-22 |  |
Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 3 [1259 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
839.8 GB | 3.13 - 3.23 Å |
| 2022-07-18 |  |
Staphylococcal self-loading helicases couple the staircase mechanism 1 with inter domain high flexibility [3345 multi-frame micrographs composed of 40 frames each in MRC format] | Qiao C [Pubmed: 35871290] [DOI: 10.1093/nar/gkac625] |
1.6 TB | 3.9 - 3.96 Å |
| 2022-06-22 |  |
Processed FIB-SEM images of murine hypothalamus-derived GT1-7 neuronal cells [multiple data sets in TIFF format] | Peddie CJ, Collinson LM [DOI: 10.3389/fcell.2022.819571] |
140.5 GB | — |
| 2022-10-07 |  |
SARS-CoV-2 S Omicron Spike B.1.1.529 [multiple data sets in MRC and EER formats] | Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Pojer F, Myasnikov A, Stahlberg H, Trono D [DOI: 10.1101/2021.12.27.474250] |
8.2 TB | 3.02 Å |
| 2023-02-28 |  |
GroEL on EG-grid [531 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
95.2 GB | 1.99 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (low particle density) [6149 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
1.1 TB | 2.08 Å |
| 2023-02-28 |  |
Beta-galactosidase on EG-grid [3500 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
369.6 GB | 1.81 Å |
| 2023-02-28 |  |
SARS-CoV-2 spike protein (1-up RBD) on EG-grid [1495 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
373.0 GB | 3.1 Å |
| 2023-02-28 |  |
SARS-CoV-2 spike protein (1-up RBD) on Quantifoil grid [2403 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
594.8 GB | 3.23 Å |
