오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with m6AAA mRNA codon in the A-site incubated with a ternary complex containing cognate acylated tRNA(Lys) [9366 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.3 TB | 2.37 - 2.85 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAA mRNA codon in the A-site [10115 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
3.8 TB | 2.04 Å | |
2023-08-18 | Initiation complex consisting of E. coli 70S ribosome with AAm6A mRNA codon in the A-site [10276 multi-frame micrographs composed of 40 frames each in TIFF format] | Koziej L, Glatt S [Pubmed: 37553384] [DOI: 10.1038/s41467-023-40422-7] |
4.0 TB | 2.04 Å | |
2023-08-18 | Cryo-EM study on a single, highly heterogeneous cellular fraction with megadalton complexes derived from Chaetomium thermophilum [522 multi-frame micrographs composed of 30 frames each in MRC format] | Semchonok DA, Kyrilis FL, Hamdi F, Kastritis PL [DOI: 10.2139/ssrn.4211492] |
489.4 GB | 3.46 - 3.74 Å | |
2023-08-18 | Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
580.8 GB | 3.2 Å | |
2023-08-18 | Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP (200 kV) [3527 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
664.6 GB | 3.6 Å | |
2023-08-18 | Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation (200 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
1.9 TB | 3.8 Å | |
2023-08-18 | Cryo-EM structure of the wild-type solitary ECF module in DDM micelles in the ATPase open and nucleotide-free conformation (200 kV) [1862 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
360.8 GB | 4.3 Å | |
2023-08-18 | Mouse heavy chain apoferritin in vitreous ice after plunge-freezing [4745 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
1023.1 GB | 1.61 Å | |
2023-08-18 | Negative stain EM structure of the NF155 extracellular domain [95 micrographs in MRC format] | McKie SJ, Deane JE [Pubmed: 36996106] [DOI: 10.1073/pnas.2218823120] |
1.5 GB | 19.0 Å | |
2023-08-18 | KpFtsZ–Mb double helical tube [3096 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Amesaka H, Yoshizawa T, Hibino K, Kamimura N, Kuroda N, Konishi T, Kato Y, Hara M, Inoue T, Namba K, Tanaka SI, Matsumura H [Pubmed: 37429870] [DOI: 10.1038/s41467-023-39807-5] |
794.4 GB | 2.67 Å | |
2023-08-18 | KpFtsZ single filament [6079 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Amesaka H, Yoshizawa T, Hibino K, Kamimura N, Kuroda N, Konishi T, Kato Y, Hara M, Inoue T, Namba K, Tanaka SI, Matsumura H [Pubmed: 37429870] [DOI: 10.1038/s41467-023-39807-5] |
1.7 TB | 3.03 Å | |
2023-08-18 | Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 2) [33336 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
5.3 TB | 2.39 Å | |
2023-08-18 | Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 3) [36507 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
5.7 TB | 2.39 Å | |
2023-08-18 | Unaligned cryo-EM micrographs of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient [1819 multi-frame micrographs composed of 40 frames each in MRC format] | Chaves-Sanjuan A, Puri S, Schulte T, Ricagno S [Pubmed: 37516426] [DOI: 10.1016/j.jmb.2023.168215] |
1.0 TB | 4.0 Å | |
2023-08-18 | Single particle cryoEM of cannabinoid receptor 1/G protein complex bound to an endocannabinoid analogue [8332 multi-frame micrographs composed of 57 frames each in TIFF format] | Kumar KK, Robertson MJ, Skiniotis G, Kobilka BK [Pubmed: 37160876] [DOI: 10.1038/s41467-023-37864-4] |
5.2 TB | 2.8 Å | |
2023-08-18 | Movies of GroEL-ES-nucleotide complex plunged 13, 50, 200 ms and 20 s after mixing with ATP [multiple data sets in TIFF format] | Torino S, Dhurandhar M, Stroobants A, Claessens R, Efremov RG [DOI: 10.1038/s41592-023-01967-z] |
2.9 TB | 2.3 - 7.1 Å | |
2023-08-18 | Single particle cryo-EM dataset of Mus musculus mitochondrial complex I [2674 multi-frame micrographs composed of 40 frames each in TIFF format] | Grba DN, Chung I, Bridges HR, Agip AA, Hirst J [Pubmed: 37531432] [DOI: 10.1126/sciadv.adi1359] |
1.1 TB | 2.39 Å | |
2023-08-18 | Single particle cryo-EM dataset of Mus musculus mitochondrial complex I bound with inhibitor Piericidin A [1200 multi-frame micrographs composed of 25 frames each in MRC format] | Grba DN, Chung I, Bridges HR, Agip AA, Hirst J [Pubmed: 37531432] [DOI: 10.1126/sciadv.adi1359] |
1.6 TB | 2.84 Å | |
2023-08-18 | Cryo electron tomography of human choriocarcinoma cells [9 multi-frame micrographs composed of 10 frames each in MRC format] | Tun WM, Darrow MC, Basham M [DOI: 10.1017/S2633903X23000107] |
115.3 GB | — | |
2023-08-18 | AP2 in the presence of heparin [3046 micrographs in MRC format] | Partlow EA, Cannon KS, Hollopeter G, Baker RW [Pubmed: 35347313] [DOI: 10.1038/s41594-022-00749-z] |
267.5 GB | 3.5 - 3.9 Å | |
2023-08-11 | Single particle cryo-EM dataset of Mus musculus mitochondrial complex I bound with inhibitor Piericidin A [1565 multi-frame micrographs composed of 40 frames each in MRC format] | Grba DN, Chung I, Bridges HR, Agip AA, Hirst J [Pubmed: 37531432] [DOI: 10.1126/sciadv.adi1359] |
960.0 GB | 2.84 Å | |
2023-08-11 | Cryo-EM micrographs of BP-ffsy filaments [20808 multi-frame micrographs composed of 40 frames each in TIFF format] | Guo J, Egelman EH, Xu B, Wang F [Pubmed: 37217766] [DOI: 10.1038/s41565-023-01401-7] |
4.9 TB | 3.1 - 3.2 Å | |
2023-07-31 | Cryo-EM micrographs of Pyn-YSPTSPpS fibers without Ca2+ [6233 multi-frame micrographs composed of 40 frames each in TIFF format] | Guo J, Egelman EH, Xu B, Wang F [DOI: 10.1016/j.chempr.2023.04.023] |
1.5 TB | 3.1 Å | |
2023-07-31 | Cryo-EM micrographs of Pyn-YSPTSPpS fibers with Ca2+ [5669 multi-frame micrographs composed of 40 frames each in TIFF format] | Rich-New ST, Guo J, Bu B, Wang F [DOI: 10.1016/j.chempr.2023.04.023] |
1.2 TB | 3.0 Å |