Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
大阪大学のEMPIAR-PDBjチームでは、アジアの電顕研究者が、EMPIARデータベースに大きな電顕画像を転送するお手伝いをしています。 ネットワークでイギリスに転送する代わりに、ハードディスク自体を郵送・宅配便で大阪大学に送付、あるいは阪大のサーバまでネットワーク転送していただければ、こちらで仲介して登録サイトへの転送を代行します。 EMPIARへの登録を希望する方で、阪大へのデータ送付・転送をご希望の方は、まず、e-mail で、登録したい電顕画像データについて、ご相談ください。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-12-07 |  |
ASC-CARD:Caspase-1-CARD octamer [5377 multi-frame micrographs composed of 50 frames each in TIFF format] | Robert Hollingsworth L, David L, Li Y, Ruan J, Wu H [Pubmed: 33420033] [DOI: 10.1038/s41467-020-20320-y] |
1.2 TB | 5.0 Å |
| 2020-12-07 |  |
Krios G4 apoferritin test with K3/(slit out) SerialEM BIS 1x1x4 [4184 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
1.2 TB | 1.43 Å |
| 2020-12-04 |  |
Cryo-EM motion corrected micrographs of rabbit muscle aldolase [1118 micrographs in MRC format] | Li Y., Cash J.N., Tesmer J.J.G., Cianfrocco M.A. [Pubmed: 32294468] [DOI: 10.1016/j.str.2020.03.008] |
59.3 GB | 3.2 Å |
| 2020-12-04 |  |
Tilt series of native M. pneumoniae cells treated with chloramphenicol [2666 tilt series in TIFF format] | Tegunov D, Xue L, Dienemann C, Cramer P, Mahamid J [Pubmed: 33542511] [DOI: 10.1038/s41592-020-01054-7] |
83.8 GB | 3.4 - 3.7 Å |
| 2020-12-04 |  |
Structure of the class D GPCR Ste2 dimer coupled to two G proteins [multiple data sets in MRC and TIFF formats] | Velazhahan V, Ma N, Pándy-Szekeres G, Kooistra AJ, Lee Y, Gloriam DE, Vaidehi N, Tate CG [Pubmed: 33268889] [DOI: 10.1038/s41586-020-2994-1] |
1.3 TB | 3.3 Å |
| 2020-12-04 |  |
Adeno-Associated Virus (AAV-DJ)-Cryo-EM Structure at 1.56 Å Resolution [2241 multi-frame micrographs composed of 200 frames each in TIFF format] | Yoshioka C [Pubmed: 33092282] [DOI: 10.3390/v12101194] |
2.8 TB | 1.56 Å |
| 2020-12-04 |  |
Cryo-EM Structure of PSII at 1.95 angstrom resolution [2160 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Miyazaki N, Hamaguchi T, Nakajima Y, Akita F, Yonekura K, Shen J [Pubmed: 33753866] [DOI: 10.1038/s42003-021-01919-3] |
427.6 GB | 1.95 Å |
| 2020-12-04 |  |
NLRP1-CT filament [1994 multi-frame micrographs composed of 50 frames each in TIFF format] | Robert Hollingsworth L, David L, Li Y, Wu H [Pubmed: 33420033] [DOI: 10.1038/s41467-020-20320-y] |
534.7 GB | 3.72 Å |
| 2020-12-04 |  |
CryoEM map and model of Nitrite Reductase at pH 8.1 [694 multi-frame micrographs composed of 49 frames each in MRC format] | Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T [Pubmed: 34217801] [DOI: 10.1016/j.jsb.2021.107768] |
1.0 TB | 2.85 Å |
| 2020-12-04 |  |
Single-particle Cryo-EM of the Thermococcus gammatolerans McrB AAA+ hexamer [1605 multi-frame micrographs composed of 40 frames each in TIFF format] | Niu Y, Suzuki H, Hosford CJ, Walz T, Chappie JS [Pubmed: 33219217] [DOI: 10.1038/s41467-020-19735-4] |
644.6 GB | 3.1 Å |
| 2020-12-04 |  |
Single-particle Cryo-EM of the Thermococcus gammatolerans McrBC complex [2178 multi-frame micrographs composed of 40 frames each in TIFF format] | Niu Y, Suzuki H, Hosford CJ, Walz T, Chappie JS [Pubmed: 33219217] [DOI: 10.1038/s41467-020-19735-4] |
883.3 GB | 2.44 Å |
| 2020-12-04 |  |
Single-particle Cryo-EM of the Escherichia coli McrBC complex [1161 multi-frame micrographs composed of 80 frames each in TIFF format] | Niu Y, Suzuki H, Hosford CJ, Walz T, Chappie JS [Pubmed: 33219217] [DOI: 10.1038/s41467-020-19735-4] |
702.5 GB | 3.28 Å |
| 2020-12-02 |  |
Tetrameric Ptch1 complexed with ShhNp [5198 multi-frame micrographs composed of 32 frames each in MRC format] | Qian H, Yan N [Pubmed: 31127104] [DOI: 10.1038/s41467-019-10234-9] |
2.5 TB | 3.6 - 6.8 Å |
| 2020-12-02 |  |
Apoferritin tilt series and frame series used to benchmark the resolution of both data types in M [multiple data sets in TIFF format] | Tegunov D, Xue L, Dienemann C, Cramer P, Mahamid J [Pubmed: 33542511] [DOI: 10.1038/s41592-020-01054-7] |
39.6 GB | 2.3 Å |
| 2020-12-02 |  |
Cryo-electron tomography reveals that dynactin recruits a team of dyneins for processive motility. [127 tilt series in MRC format] | Grotjahn D.A, Lander G.C, Chowdhury S [Pubmed: 29416113] [DOI: 10.1038/s41594-018-0027-7] |
200.1 GB | 38.0 Å |
| 2020-12-02 |  |
Krios G4 apoferritin test with K3/BioQuantum SerialEM BIS 1x1x4 [3472 multi-frame micrographs composed of 76 frames each in TIFF format] | Danev R [Pubmed: 33969878] [DOI: 10.1093/jmicro/dfab016] |
966.0 GB | 1.35 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.0 [1069 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
349.6 GB | 2.93 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.4 [1183 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
208.9 GB | 2.76 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.10 [667 multi-frame micrographs composed of 38 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
278.2 GB | 3.12 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of 197bp nucleosome with scFv [1986 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
738.9 GB | 2.85 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing chimeric linker histone gH1.10-ncH1.4 [1426 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
571.7 GB | 3.03 Å |
| 2020-11-27 |  |
Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain [1604 multi-frame micrographs composed of 48 frames each in TIFF format] | Kalbermatter DK, Shrestha NS, Gall FMG, Wyss MW, Riedl RR, Plattet PP, Fotiadis DF [Pubmed: 32647825] [DOI: 10.1016/j.yjsbx.2020.100021] |
474.1 GB | 4.3 Å |
| 2020-11-27 |  |
Micrograph frames from 110 internal SEMC/NYSBC test datasets used for Topaz-Denoise model generation & analysis [1000000 micrographs in MRCS format] | Bepler T, Kelley K, Noble AJ, Berger B [Pubmed: 33060581] [DOI: 10.1038/s41467-020-18952-1] |
33.9 TB | 2.9 - 12.54 Å |
| 2020-11-27 |  |
CryoEM SPA of Holo-SrpI Encapsulin Complex (Raw Frames) [1023 multi-frame micrographs composed of 33 frames each in TIFF format] | Nichols RJ, LaFrance BJ, Phillips NR, Oltrogge LM, Valentin-Alvarado LE, Bischoff AJ, Nogales E, Savage DF [Pubmed: 33821786] [DOI: 10.7554/eLife.59288] |
390.3 GB | 2.2 Å |
| 2020-11-27 |  |
Movies of Nsp7-Nsp8-Nsp12 SARS-CoV2 RNA-dependent RNA polymerase in complex with template:primer dsRNA and favipiravir-RTP [63977 multi-frame micrographs composed of 24 frames each in MRCS format] | Naydenova K, Muir KW, Wu LF, Zhang Z, Coscia F, Peet MJ, Castro-Hartmann P, Qian P, Sader K, Dent K, Kimanius D, Sutherland JD, Löwe J, Barford D, Russo CJ [Pubmed: 33526596] [DOI: 10.1073/pnas.2021946118] |
23.9 TB | 2.5 Å |
