EMPIAR-10594 - Human NLRP1-DPP9 complex [multiple data sets in TIFF format]

EMPIAR-10594

Human NLRP1-DPP9 complex [multiple data sets in TIFF format]

Publication:

DPP9 sequesters the C terminus of NLRP1 to repress inflammasome activation

Hollingsworth LR, Sharif H, Griswold AR, Fontana P, Mintseris J, Dagbay KB, Paulo JA, Gygi SP, Bachovchin DA, Wu H

Nature (2021)

PMID: 33731932

DOI: 10.1038/s41586-021-03350-4

Related EMDB entry:

EMD-22074

Deposited:

2020-06-17

Released:

2021-04-14

Last modified:

2021-04-14

Imageset size:

2.30 TB

Imageset DOI:

10.6019/EMPIAR-10594

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multi frame micographs of NLRP1-DPP9-Apo-noTILT dataset

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

7836

Image size:

(None, None)

Pixel type:

BIT

Pixel spacing:

(0.825, 0.825)

Details:

Dataset of NLRP1-DPP9-apo complex with zero TILT data
The defocus range between −1 to −2.5 μm and to record two shots for each of the four
holes per stage movement through image shift. All movies were exposed with a total dose of 67.5
e-/Å2 for 1.8 s fractionated over 45 frames

Files:

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rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

2. Unaligned multi frame micographs of NLRP1-DPP9-Apo-TILT dataset

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

1924

Image size:

(None, None)

Pixel type:

BIT

Pixel spacing:

(0.825, 0.825)

Details:

37 degrees TILT data set of NLRP1-DPP9-apo complex.
The defocus range between −1.5 to −3.0 μm with two shots recorded for each hole per stage movement through image shift. All movies were exposed with a total dose of 67.6 e-/Å2 for 2.6 s fractionated over 45 frames.

Files:

選択したファイルを無圧縮zipファイルにアーカイブ化してダウンロードします。

rsync、aspera、globus 等の利用をおすすめします。

選択したファイルのリストをダウンロードします。

rsyncコマンド等でファイルリストを指定してダウンロードすることが可能です。

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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Poudel B, Gyawali R, Dhakal A, Cheng J, Xu D. (2026)

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Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

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He L, Bartesaghi A. (2026)

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CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Dual site targeting of the bacterial 70S ribosome by tetracyclines.

Devarkar SC, Lomakin IB, Wang J, Grada A, Bunick CG. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

See all citations

Protein Data Bank Japan News

[2026-06-10]

333件のPDBエントリーが新たに公開されました。（2026-06-10付）