現在、ストレージの障害により、一部データセットがアクセスできないか不完全な状態(Marked: Incomplete dataset)になっています。
以下の順で復旧作業継続中ですが、優先リクエスト承ります(email、inquiry)
ご不便をおかけしますがご理解よろしくお願いします。
大阪大学のEMPIAR-PDBjチームでは、アジアの電顕研究者が、EMPIARデータベースに大きな電顕画像を転送するお手伝いをしています。 ネットワークでイギリスに転送する代わりに、ハードディスク自体を郵送・宅配便で大阪大学に送付、あるいは阪大のサーバまでネットワーク転送していただければ、こちらで仲介して登録サイトへの転送を代行します。 EMPIARへの登録を希望する方で、阪大へのデータ送付・転送をご希望の方は、まず、e-mail で、登録したい電顕画像データについて、ご相談ください。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-09-11 | Single particle structure of mCELSR1 extracellular region containing CADH9-GAIN domains [11377 multi-frame micrographs composed of 50 frames each in TIFF format] | Bandekar SJ, Arac D [Pubmed: 40295529] [DOI: 10.1038/s41467-025-59319-8] |
6.0 TB | 4.3 Å | |
| 2025-09-09 | Agonist-free BmGR9 [12024 multi-frame micrographs composed of 68 frames each in TIFF format] | Frank HM, Walujkar S, Walsh Jr RM, Laursen WJ, Theobald DL, Garrity PA, Gaudet R [Pubmed: 38573859] [DOI: 10.1016/j.celrep.2024.114035] |
4.4 TB | 2.85 Å | |
| 2025-09-09 | Human polymerase epsilon bound to PCNA and DNA with a pre-existing mismatch in the blocked conformation [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 40440070] [DOI: 10.1073/pnas.2507232122] |
10.8 TB | 3.81 - 3.88 Å | |
| 2025-09-05 | High-resolution snapshots of talin auto-inhibitory states [12573 multi-frame micrographs composed of 40 frames each in TIFF format] | Izard T, Rangarajan ES [Pubmed: 39468080] [DOI: 10.1038/s41467-024-52581-2] |
3.5 TB | 2.7 - 3.4 Å | |
| 2025-09-05 | Benchmark TEM data of mouse brain previously imaged by Nikon confocal microscopy [1 micrographs in TIFF format] | Konishi KK, Neves GN, Russell MR, Burrone JB, Fleck RF [DOI: 10.1111/jmi.13436] |
2.5 GB | — | |
| 2025-09-05 | Cryo electron micrographs of RyR2-S2808D [10067 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
2.2 TB | 2.98 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-S2808D in the presence of H2O2/NOC-12/GSH [13908 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
3.1 TB | 3.64 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-S2808D in the presence of Rapamycin [18491 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
4.1 TB | 3.96 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-R420Q [13276 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
3.0 TB | 2.86 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-R420W [7420 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.7 TB | 3.13 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-R420W with calcium [7490 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.6 TB | 3.29 - 3.52 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-R420W with ARM210 [6488 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.4 TB | 3.08 Å | |
| 2025-09-05 | Cryo electron micrographs of RyR2-R420W with calcium and calmodulin [10334 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
2.3 TB | 3.12 - 3.56 Å | |
| 2025-09-04 | Functionalized graphene-oxide grids enable high-resolution cryo-EM structures of the SNF2H-nucleosome complex without crosslinking [9443 multi-frame micrographs composed of 113 frames each in TIFF format] | Chio US, Palovcak E, Autzen AAA, Autzen HE, Muñoz E, Yu Z, Wang F, Agard DA, Armache J-P, Narlikar GJ, Cheng Y [Pubmed: 38472177] [DOI: 10.1038/s41467-024-46178-y] |
7.1 TB | 2.3 - 3.2 Å | |
| 2025-09-04 | Structure of the C-terminal protease CtpA-LbcA complex of Pseudomonas aeruginosa [26257 multi-frame micrographs composed of 75 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38467832] [DOI: 10.1038/s44318-024-00069-6] |
15.1 TB | 3.55 - 4.14 Å | |
| 2025-09-04 | TadA with ADP [24810 multi-frame micrographs composed of 40 frames each in TIFF format] | Hohl M, Low HH [Pubmed: 39103374] [DOI: 10.1038/s41467-024-50280-6] |
3.9 TB | 3.1 Å | |
| 2025-09-04 | Cryo-ET of D. melanogaster Nup358::VN/Nup358::VC cells [multiple data sets in MRC format] | Sachweh J, Beck M [Pubmed: 40829587] [DOI: 10.1016/j.cell.2025.07.025] |
307.9 GB | 31.1 - 69.0 Å | |
| 2025-09-04 | Particle stacks from ANP amyloids from left atrial appendage of atrial fibrillation patient [multiple data sets in MRCS format] | Broggini L, Chaves-Sanjuan A, Ricagno S | 492.9 GB | 2.96 - 3.3 Å | |
| 2025-09-04 | Cryo electron micrographs of RyR2-S2808D with ARM210 [10990 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
2.4 TB | 3.18 Å | |
| 2025-09-04 | Cryo-electron microscopy of the bacterial phytochrome PaBphP in its PrPfr intermediate state [multiple data sets in TIFF and MRC formats] | Bodizs S, Westenhoff S [DOI: 10.1101/2025.08.21.671592] |
13.2 TB | 2.8 Å | |
| 2025-09-04 | Cryo electron micrographs of RyR2-R420Q with ARM210 [7807 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC [Pubmed: 39278969] [DOI: 10.1038/s41467-024-51791-y] |
1.7 TB | 3.53 Å | |
| 2025-09-03 | High-resolution snapshots of talin auto-inhibitory states [3636 multi-frame micrographs composed of 40 frames each in TIFF format] | Izard T, Rangarajan E.S. [Pubmed: 39468080] [DOI: 10.1038/s41467-024-52581-2] |
917.0 GB | 3.7 - 5.5 Å | |
| 2025-09-03 | Cryo-Electron Tomography of hippocampal neuron with Voltage imaging [193 reconstructed volumes in MRC format] | Jung MJ, Roh S-HR, Jung MJ, Roh S-HR, Jung MJ, Roh S-HR | 318.7 GB | 7.8 Å | |
| 2025-09-02 | Intermediate states of ATAD5-RFC incubated with PCNA for 20min [18426 multi-frame micrographs composed of 50 frames each in TIFF format] | Wang FW [Pubmed: 38871854] [DOI: 10.1038/s41594-024-01332-4] |
11.5 TB | 3.04 Å | |
| 2025-09-02 | In situ insights into antibody-neutralization of a pre-fusion Junin virus glycoprotein complex [41612 multi-frame micrographs composed of 40 frames each in TIFF format] | Rodriguez JAR, Taylor LJT [Pubmed: 40632652] [DOI: 10.1016/j.celrep.2025.115971] |
16.0 TB | 3.8 Å |