Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-10-16 |  |
E. coli 50S ribosome bound to VM2 [1097 multi-frame micrographs composed of 80 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
465.0 GB | 2.6 Å |
| 2021-10-11 |  |
Nucleolar maturation of the human small subunit processome [multiple data sets in TIFF and MRC formats] | Singh S, Vanden Broeck A, Klinge S [Pubmed: 34516797] [DOI: 10.1126/science.abj5338] EMD-23939 EMD-23936 EMD-24149 EMD-24150 EMD-24151 EMD-24152 EMD-24153 EMD-24154 EMD-24155 EMD-24156 EMD-24157 EMD-24158 EMD-24159 EMD-24160 EMD-24161 EMD-23940 EMD-23938 EMD-24162 EMD-24163 EMD-24164 EMD-24165 EMD-24166 EMD-24167 EMD-24168 EMD-24169 EMD-24170 EMD-24171 EMD-24172 EMD-24173 EMD-24174 EMD-24175 EMD-24176 |
74.6 TB | 2.6 - 6.37 Å |
| 2019-12-19 |  |
Structure of a synthetic beta-carboxysome shell [1343 multi-frame micrographs composed of 25 frames each in TIFF format] | Laughlin TG [Pubmed: 31501298] [DOI: 10.1104/pp.19.00885] |
423.5 GB | 2.6 - 4.1 Å |
| 2021-02-05 |  |
Affinity-purified RqcH-ribosome-associated quality control complexes from Bacillus subtilis [7178 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
514.6 GB | 2.6 - 3.5 Å |
| 2021-02-05 |  |
Affinity-purified RqcP/YabO-ribosome-associated quality control complexes from Bacillus subtilis [5416 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
358.1 GB | 2.6 - 4.9 Å |
| 2023-09-06 |  |
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation (300 kV) [multiple data sets in TIFF format] | Thangaratnarajah C, Rheinberger J, Paulino C, Slotboom DJ [Pubmed: 37491368] [DOI: 10.1038/s41467-023-40266-1] |
4.4 TB | 2.6 Å |
| 2021-11-15 |  |
CryoEM structure of Apoferritin at 2.6A from Tundra, 100kV microscope [1896 multi-frame micrographs composed of 18 frames each in MRC format] | Karia D, Hlavenkova Z, Koh AF, Malinsky M, Yu L, Kotecha A | 1.0 TB | 2.6 Å |
| 2019-12-20 |  |
Apo-state Streptavidin [multiple data sets in MRCS format] | Han Y, Fan X, Wang H, Zhao F, Tully CG, Kong J, Yao N, Yan N [Pubmed: 31879346] [DOI: 10.1073/pnas.1919114117] |
922.4 GB | 2.6 Å |
| 2021-12-23 |  |
cryoEM structure of Gq-coupled MRGPRX4 with small molecule agonist MS47134 [4506 multi-frame micrographs composed of 60 frames each in TIFF format] | Cao C, Fay J, Roth B [Pubmed: 34789874] [DOI: 10.1038/s41586-021-04126-6] |
1.3 TB | 2.6 Å |
| 2022-07-15 |  |
CryoEM single particle dataset for psNb 2-45 with spike protein [2062 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
873.7 GB | 2.6 Å |
| 2020-08-17 |  |
CryoEM dataset of sarkosyl-insoluble fractions from the putamen of multiple system atrophy brain of case 1 [multiple data sets in TIFF, MRC and MRCS formats] | Schweighauser M, Shi Y, Tarutani A, Kametani F, Murzin AG, Ghetti B, Matsubara T, Tomita T, Ando T, Hasegawa K, Murayama S, Yoshida M, Hasegawa M, Scheres SHW, Goedert M [Pubmed: 32461689] [DOI: 10.1038/s41586-020-2317-6] |
3.2 TB | 2.6 Å |
| 2020-05-27 |  |
2.6 Angstrom cryo-EM reconstructions of HemQ from Geobacillus in the presence of substantial aberrations [257 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.3 TB | 2.6 Å |
| 2024-02-26 |  |
Graphene-sandwiched 20S proteasome [50 multi-frame micrographs composed of 32 frames each in MRCS format] | Liu N, Xu J, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
28.9 GB | 2.6 Å |
| 2021-03-12 |  |
PKM2 in complex with L-threonine [476 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
620.8 GB | 2.6 Å |
| 2021-08-13 |  |
Human apo ferritin frozen on TEM grid with amorphous carbon supporting film [743 multi-frame micrographs composed of 32 frames each in TIFF format] | Huang X, Zhang L, Wen Z, Chen H, Li S, Ji G, Yin CC, Sun F [Pubmed: 32758492] [DOI: 10.1016/j.pbiomolbio.2020.07.009] |
226.5 GB | 2.6 Å |
| 2022-06-17 |  |
Single particle cryogenic electron micrographs of tetrahymena mitochondrial electron transport chain complexes [multiple data sets in TIFF and MRC formats] | Zhou L, Guo F, Letts JA [Pubmed: 35357889] [DOI: 10.1126/science.abn7747] |
7.8 TB | 2.6 Å |
| 2023-03-02 |  |
Gordonia phage Ziko [5058 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.4 TB | 2.6 Å |
| 2018-05-11 |  |
Rabbit muscle aldolase movies obtained using Talos Arctica operating at 200 kV equipped with a K2 [663 multi-frame micrographs composed of 44 frames each in MRC format] | Herzik Jr MA, Wu M, Lander GC [Pubmed: 28991891] [DOI: 10.1038/nmeth.4461] |
244.7 GB | 2.6 Å |
| 2023-02-27 |  |
Gordonia phage Cozz [2799 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
759.4 GB | 2.6 Å |
| 2020-08-18 |  |
Mechanism of Ribosome Rescue by Alternative Release Factor B [multiple data sets in MRC format] | Chan K-H, Petrychenko V, Mueller C, Maracci C, Holtkamp W, Wilson DN, Fischer N, Rodnina MV [Pubmed: 32796827] [DOI: 10.1038/s41467-020-17853-7] |
788.2 GB | 2.6 - 3.7 Å |
| 2018-08-15 |  |
The first reconstruction of beta-galactosidase solved by cryoARM200 [1338 multi-frame micrographs composed of 49 frames each in TIFF format] | Kato T, Terehara N, Namba K | 321.4 GB | 2.6 Å |
| 2021-06-04 |  |
Cryo-EM structure of human rod CNGA1 channel in apo-state [stack of 274333 particles in MRCS format] | Xue J, Han Y, Zeng W, Wang Y, Jiang Y [Pubmed: 33651975] [DOI: 10.1016/j.neuron.2021.02.007] |
84.9 GB | 2.6 Å |
| 2024-02-01 |  |
Cryo-EM micrographs of Sweet Potato Feathery Mosaic Virus [3276 micrographs in MRC format] | Javed A, Byrne MJ, Ranson NA [Pubmed: 37076658] [DOI: 10.1038/s42003-023-04799-x] |
204.8 GB | 2.6 Å |
| 2020-07-21 |  |
Single particle cryo EM dataset of SARS-CoV-2 Spike protein in uncleavable form, which generated a 2.6Å reconstruction of the closed trimer. [9210 multi-frame micrographs composed of 30 frames each in MRC format] | Wrobel AG, Benton DJ, Nans A, Rosenthal PB, Gamblin SJ [Pubmed: 32647346] [DOI: 10.1038/s41594-020-0468-7] |
8.4 TB | 2.6 Å |
| 2023-10-31 |  |
Cryo-EM micrographs of AD tau filaments with PET ligand Flortaucipir [1172 multi-frame micrographs composed of 40 frames each in MRC format] | Shi Y, Ghetti B, Goedert M, Scheres S, Lovestam S [Pubmed: 37330290] [DOI: 10.1016/j.jmb.2023.168025] |
278.5 GB | 2.6 Å |
