Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-06-17 |  |
CryoEM movies of nitrogenase (MoFeP + FeP) from Azotobacter vinelandii under catalytic turnover conditions [multiple data sets in TIFF and MRC formats] | Rutledge HL, Cook BD, Nguyen HPM, Tezcan FA, Herzik Jr MA [Pubmed: 35901182] [DOI: 10.1126/science.abq7641] |
4.9 TB | 2.34 - 3.01 Å |
| 2024-01-05 |  |
CryoEM micrographs of RAD51 filaments on ssDNA bound by the BRCA2 c-terminus [12005 multi-frame micrographs composed of 38 frames each in TIFF format] | Appleby R, Joudeh L, Cobbett K, Pellegrini L [Pubmed: 37216117] [DOI: 10.1016/j.isci.2023.106689] |
1.8 TB | 2.9 Å |
| 2024-02-13 |  |
Single-Particle Cryo-EM of AAV2 at Various Tilts [multiple data sets in MRCS and MRC formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
730.4 GB | 2.1 - 2.2 Å |
| 2024-07-16 |  |
Single-Particle Cryo-EM of DPS at Various Tilts [multiple data sets in TIFF, MRC and MRCS formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
114.7 GB | 2.6 - 3.2 Å |
| 2024-05-20 |  |
Cryo-EM structure of the CAK-THZ1 complex [multiple data sets in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
4.7 TB | 1.9 Å |
| 2023-12-12 |  |
CryoEM micrographs of RAD51 filaments on dsDNA bound by the BRCA2 c-terminus [10167 multi-frame micrographs composed of 93 frames each in TIFF format] | Appleby R, Joudeh L, Cobbett K, Pellegrini L [Pubmed: 37919288] [DOI: 10.1038/s41467-023-42830-1] |
1.5 TB | 2.83 Å |
| 2024-01-15 |  |
CryoEM movies of nitrogenase (MoFeP + FeP) from Azotobacter vinelandii under catalytic turnover conditions with inhibitor BeFx [multiple data sets in MRC format] | Rutledge HL, Cook BD, Nguyen HPM, Tezcan FA, Herzik Jr MA [Pubmed: 35901182] [DOI: 10.1126/science.abq7641] |
1.7 TB | 2.4 Å |
| 2024-07-04 |  |
Single-Particle Cryo-EM of Apoferritin at Various Tilts [multiple data sets in TIFF, MRC and MRCS formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
302.1 GB | 2.2 - 2.5 Å |
| 2024-03-26 |  |
Single-Particle Cryo-EM of RNA Polymerase at Various Tilts [multiple data sets in TIFF, MRC and MRCS formats] | Aiyer S, Baldwin PR, Tan SM, Shan Z, Oh J, Mehrani A, Bowman ME, Louie G, Passos DO, Đorđević-Marquardt S, Mietzsch M, Hull JA, Hoshika S, Barad BA, Grotjahn DA, McKenna R, Agbandje-McKenna M, Benner SA, Noel JAP, Wang D, Tan YZ, Lyumkis D [Pubmed: 38195598] [DOI: 10.1038/s41467-023-44555-7] |
487.4 GB | 3.1 Å |
| 2024-05-20 |  |
Cryo-EM micrographs of human α1B/βI+βIVb microtubules bound to GMPCPP decorated with TTLL6 [2770 micrographs in MRC format] | Zehr EA, Roll-Mecak A [Pubmed: 38658656] [DOI: 10.1038/s41589-024-01599-0] |
146.9 GB | 3.6 Å |
| 2024-05-14 |  |
Cryo-EM structure of CAK in complex with nucleotide analogue ATPgS [5781 multi-frame micrographs composed of 981 frames each in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
2.3 TB | 1.9 Å |
| 2024-05-16 |  |
Cryo-EM structure of apo-CAK [5805 multi-frame micrographs composed of 981 frames each in EER format] | Cushing VI, Koh AF, Feng J, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
2.3 TB | 2.3 Å |
| 2024-09-03 |  |
AL amyloid fibril from the FOR103 light chain [2788 multi-frame micrographs composed of 40 frames each in TIFF format] | Pfeiffer PB, Karimi-Farsijani S, Schmidt M, Fändrich M [Pubmed: 38879609] [DOI: 10.1038/s41467-024-49520-6] |
504.3 GB | 2.92 Å |
| 2025-02-21 |  |
AL amyloid fibril from the FOR010 light chain [4008 multi-frame micrographs composed of 963 frames each in EER format] | Pfeiffer PB, Banerjee S, Schmidt M, Fändrich M [Pubmed: 38879609] [DOI: 10.1038/s41467-024-49520-6] |
1.8 TB | 2.25 Å |
| 2024-08-02 |  |
Cryo-EM structure of the IS621 recombinase in complex with bridge RNA, donor DNA, and target DNA [multiple data sets in TIFF format] | Hiraizumi M [Pubmed: 38926616] [DOI: 10.1038/s41586-024-07570-2] |
6.6 TB | 2.5 - 2.9 Å |
| 2024-05-20 |  |
Cryo-EM structure of the CAK-CT7030 complex [10017 multi-frame micrographs composed of 909 frames each in EER format] | Cushing VI, Koh AF, Feng J, Jurgaityte K, Bondke A, Kroll SHB, Barbazanges M, Scheiper B, Bahl AK, Barrett AGM, Ali S, Kotecha A, Greber BJ [Pubmed: 38480681] [DOI: 10.1038/s41467-024-46375-9] |
3.7 TB | 1.9 Å |
| 2024-07-14 |  |
CryoEM micrographs of a group II RNP in the post-ligation state [multiple data sets in TIFF format] | Xu L, Liu T, Chung K [Pubmed: 37993708] [DOI: 10.1038/s41586-023-06746-6] |
5.9 TB | 3.0 Å |
| 2024-06-12 |  |
Graphene-sandwiched spike [2200 multi-frame micrographs composed of 32 frames each in TIFF format] | Xu J, Gao X, Zheng L, Jia X, Xu K, Ma Y, Wei X, Liu N, Peng H, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
1.5 TB | 2.5 Å |
| 2025-02-04 |  |
Structure of 4R2N ClearTau [25793 multi-frame micrographs composed of 1150 frames each in EER format] | Tatli M [Pubmed: 37402718] [DOI: 10.1038/s41467-023-39314-7] |
8.4 TB | 3.1 Å |
| 2024-04-02 |  |
Cryo-EM of SARS-CoV-2 5' proximal stem-loops 5-6 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
2.8 TB | 7.8 Å |
| 2024-05-13 |  |
Cryo-EM of SARS-CoV-2 5' proximal stem-loops 5-6 with SL5c extended [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
1.0 TB | 9.1 Å |
| 2024-04-02 |  |
Cryo-EM of SARS-CoV-1 5' proximal stem-loop 5 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
2.2 TB | 7.1 Å |
| 2024-06-04 |  |
Cryo-electron tomogram of mitochondria in cryo-FIB milled s-Opa1* mouse embryonic fibroblasts [284 multi-frame micrographs composed of 6 frames each in TIFF format] | Fry MY, Navarro PP, Ananda VY, Ge Y, McDonald JL, Hakim P, Luce BE, Lugo CM, Chao LH [Pubmed: 38225406] [DOI: 10.1038/s44318-024-00027-2] |
21.4 GB | — |
| 2024-06-04 |  |
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 deletion [278 multi-frame micrographs composed of 6 frames each in TIFF format] | Fry MY, Navarro PP, Ananda VY, Ge Y, McDonald JL, Hakim P, Luce BE, Lugo CM, Chao LH [Pubmed: 38225406] [DOI: 10.1038/s44318-024-00027-2] |
18.5 GB | — |
| 2024-06-04 |  |
Cryo-electron tomogram of mitochondria in cryo-FIB milled mouse embryonic fibroblasts with OPA1 overexpression [258 multi-frame micrographs composed of 4 frames each in TIFF format] | Fry MY, Navarro PP, Ananda VY, Ge Y, McDonald JL, Hakim P, Luce BE, Lugo CM, Chao LH [Pubmed: 38225406] [DOI: 10.1038/s44318-024-00027-2] |
8.8 GB | — |
