Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-01-18 |  |
Cryo iDPC-STEM single particle analysis of keyhole limpet hemocyanin [multiple data sets in TIFF format] | Mann DM, Lazic I, Wirix M, de Haas F [Pubmed: 36064775] [DOI: 10.1038/s41592-022-01586-0] |
42.9 GB | 6.51 Å |
| 2014-02-21 |  |
Low-contrast particle stack for HIV-1 Env gp160 precursor (Spider stack) [stack of 670023 particles in SPIDER format] | Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
164.2 GB | 6.0 Å |
| 2014-02-21 |  |
Low-contrast particle stack for HIV-1 Env gp160 precursor (MRC stack) [stack of 124478 particles in MRC format] | Mao Y, Wang L, Gu C, Herschhorn A, Desormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
38.0 GB | 6.0 Å |
| 2013-08-26 |  |
HIV-1 envelope glycoprotein trimer micrographs [multiple data sets in SPIDER format] | Mao Y, Wang L, Gu C, Herschhorn A, Désormeaux A, Finzi A, Xiang SH, Sodroski JG [Pubmed: 23757493] [DOI: 10.1073/pnas.1307382110] |
586.8 GB | 6.0 Å |
| 2023-02-28 |  |
Cryo-ET tilt series of HPIV3 clinical isolates in the presence of an F neutralizing Fab [6 tilt series in MRC format] | Marcink T, Cheng W, Porotto M, des Georges A, Moscona A [Pubmed: 36763666] [DOI: 10.1126/sciadv.ade2727] |
19.1 GB | 16.5 Å |
| 2023-02-28 |  |
Cryo-ET tilt series of HPIV3 clinical isolates [11 tilt series in MRC format] | Marcink T, Porotto M, des Georges A, Moscona A [Pubmed: 36763666] [DOI: 10.1126/sciadv.ade2727] |
33.7 GB | 10.2 Å |
| 2022-10-07 |  |
Tilt series of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein [6 tilt series in MRC format] | Marcink TC, Porotto M, des Georges A, Moscona A [Pubmed: 35984891] [DOI: 10.1126/sciadv.abo3153] |
9.6 GB | — |
| 2020-09-11 |  |
Human Parainfluenza Virus Fusion Complex Glycoproteins Imaged In Action On Authentic Viral Surfaces [2 tilt series in MRC format] | Marcink TC, Wang T, des Georges A, Porotto M, Moscona A [Pubmed: 32956394] [DOI: 10.1371/journal.ppat.1008883] |
11.6 GB | 17.18 Å |
| 2022-11-18 |  |
Cryo-EM reconstruction of TNKS2 SAM-PARP filament [multiple data sets in MRCS, MRC and TIFF formats] | Mariotti L, Inian O, Desfosses A, Beuron F, Morris E.P, Guettler S [Pubmed: 36418402] [DOI: 10.1038/s41586-022-05449-8] |
11.8 TB | 2.98 Å |
| 2022-02-07 |  |
Cryo electron microscopy SMARCAD1 with nucleosome in ADP-BeF3 bound state [11235 multi-frame micrographs composed of 60 frames each in TIFF format] | Markert JW, Luger K [Pubmed: 34652950] [DOI: 10.1126/sciadv.abk2380] |
6.2 TB | 6.49 Å |
| 2022-08-16 |  |
Cryo-EM structure of the human GS-GN complex in the inhibited state [multiple data sets in EER and MRC formats] | Marr L, Biswas D, Daly LA, Browning C, Vial SCM, Maskell DP, Hudson C, Bertrand JA, Pollard J, Ranson NA, Khatter H, Eyers CE, Sakamoto K, Zeqiraj E [Pubmed: 35690592] [DOI: 10.1038/s41467-022-31109-6] |
9.2 TB | 2.62 Å |
| 2021-01-22 |  |
Actin filament structure from focal adhesions of mouse embryonic fibroblasts [7 tilt series in MRC format] | Martins B, Sorrentino S, Chung WL, Tatli M, Medalia O, Eibauer M [Pubmed: 33476550] [DOI: 10.1016/j.str.2020.12.014] |
314.1 GB | 17.0 Å |
| 2022-11-15 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to diazepam and GABA [1472 multi-frame micrographs composed of 40 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.8 TB | 3.58 Å |
| 2022-11-14 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to alprazolam and GABA [815 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.0 TB | 3.26 Å |
| 2022-11-15 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to bicuculline [988 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.2 TB | 3.69 Å |
| 2022-11-14 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to picrotoxin and GABA [794 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1017.1 GB | 3.04 Å |
| 2022-11-01 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to picrotoxin [803 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.0 TB | 3.1 Å |
| 2021-10-26 |  |
CryoEM image reconstuction of the envelope protein of endogenous retrovirus Y032 from the human hookworm Ancylostoma ceylanicum [3027 multi-frame micrographs composed of 36 frames each in MRC format] | Mata CP, Merchant M, Modis Y [Pubmed: 35544562] [DOI: 10.1126/sciadv.abj6894] |
5.6 TB | 3.76 Å |
| 2020-08-12 |  |
TEM tomograms of Drosophila tracheal terminal cells during subcellular tube formation [multiple data sets in TIFF and MRC formats] | Mathew R, Rios-Barrera LD, Machado P, Schwab Y, Leptin M [Pubmed: 32657472] [DOI: 10.15252/embj.2020105332] |
366.7 GB | — |
| 2023-01-03 |  |
C-terminal half of Leucine Rich Repeat Kinase 1 (LRRK1) [3629 multi-frame micrographs composed of 50 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
1.2 TB | 5.8 Å |
| 2023-01-03 |  |
Apo C-terminal half of LRRK2 (I2020T) bound to microtubule [2379 multi-frame micrographs composed of 50 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
643.9 GB | 7.0 Å |
| 2023-01-03 |  |
C-terminal half of LRRK2 (I2020T) bound to microtubule in presence of MLi-2 kinase inhibitor [2354 multi-frame micrographs composed of 55 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
684.8 GB | 4.5 - 18.0 Å |
| 2024-02-29 |  |
cryo-EM structure of nucleotide-free rMRP2 [12785 multi-frame micrographs composed of 50 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB | 2.0 TB | 3.21 Å |
| 2024-02-29 |  |
cryo-EM structure of rMRP2 in complex with probenecid [13827 multi-frame micrographs composed of 40 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB | 1.9 TB | 3.45 Å |
| 2018-07-06 |  |
Structure of the herpes-simplex virus portal-vertex [3818 micrographs in MRC format] | McElwee M, Vijayakrishnan S, Rixon FJ, Bhella D [Pubmed: 29924793] [DOI: 10.1371/journal.pbio.2006191] |
238.6 GB | 7.7 Å |
