Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-05-26 |  |
Archaeal DNA ligase and heterotrimeric PCNA with ligatable nicked DNA [multiple data sets in TIFF format] | Sverzhinsky A, Pascal JM [Pubmed: 34838188] [DOI: 10.1016/j.str.2021.11.002] |
5.4 TB | 4.2 - 4.38 Å |
| 2021-04-14 |  |
Interleukin-10 signaling complex with IL-10RA and IL-10RB [9454 multi-frame micrographs composed of 50 frames each in TIFF format] | Saxton RA, Tsutsumi N, Gati C, Garcia KC [Pubmed: 33737461] [DOI: 10.1126/science.abc8433] |
5.4 TB | 3.5 Å |
| 2021-02-17 |  |
Raw cryo- and negative stain micrographs of a native extract from C. thermophilum used to reconstruct oxo acid dehydrogenase complexes [0 multi-frame micrographs composed of 0 frames each in MRC format] | Kastritis PLK [DOI: 10.1016/j.celrep.2021.108727] |
5.4 TB | 6.9 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to streptogramin A analog 3142 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 5.3 TB | 1.91 Å |
| 2023-08-18 |  |
Structure of TDP-43 amyloid filaments from type A FTLD-TDP (individual 2) [33336 multi-frame micrographs composed of 40 frames each in TIFF format] | Arseni D, Ryskeldi-Falcon B [Pubmed: 37532939] [DOI: 10.1038/s41586-023-06405-w] |
5.3 TB | 2.39 Å |
| 2023-05-17 |  |
LPHN3 (ADGRL3) 7TM domain bound to tethered agonist in complex with G protein heterotrimer [8877 multi-frame micrographs composed of 63 frames each in TIFF format] | Barros-Alvarez X, Panova O, Skiniotis G [Pubmed: 35418682] [DOI: 10.1038/s41586-022-04575-7] |
5.3 TB | 2.9 Å |
| 2022-08-08 |  |
Architecture of the human erythrocyte ankyrin-1 complex [multiple data sets in TIFF, MRC and MRCS formats] | Vallese F, Clarke OB [Pubmed: 35835865] [DOI: 10.1038/s41594-022-00792-w] |
5.2 TB | 2.4 Å |
| 2022-06-21 |  |
Cryo-electron microscopy reconstruction of PCAT1 in three distinct inward-facing conformations during ATP turnover condition [11966 multi-frame micrographs composed of 50 frames each in TIFF format] | Kieuvongngam V, Chen J [Pubmed: 35074919] [DOI: 10.1073/pnas.2120534119] |
5.2 TB | 3.7 - 4.1 Å |
| 2022-11-14 |  |
Amyloid fibril from the antimicrobial peptide aurein 3.3 [multiple data sets in TIFF and MRCS formats] | Bücker R, Seuring C, Cazey C, Veith K, Garcia-Alai M, Grünewald K, Landau M [Pubmed: 35896552] [DOI: 10.1038/s41467-022-32039-z] |
5.2 TB | 3.5 Å |
| 2023-08-18 |  |
Single particle cryoEM of cannabinoid receptor 1/G protein complex bound to an endocannabinoid analogue [8332 multi-frame micrographs composed of 57 frames each in TIFF format] | Kumar KK, Robertson MJ, Skiniotis G, Kobilka BK [Pubmed: 37160876] [DOI: 10.1038/s41467-023-37864-4] |
5.2 TB | 2.8 Å |
| 2022-08-08 |  |
Structure of a Vaccine-Induced, Germline-Encoded Human Antibody Defines a Neutralizing Epitope on the SARS-CoV-2 Spike N-Terminal Domain [9370 multi-frame micrographs composed of 50 frames each in TIFF format] | Altomare CG, Adelsberg DC, Carreno JM, Sapse IA, Amanat F, Ellebedy AH, Simon V, Krammer F, Bajic G [Pubmed: 35467422] [DOI: 10.1128/mbio.03580-21] |
5.1 TB | 3.6 - 3.7 Å |
| 2023-02-15 |  |
Escherichia coli gyrase holocomplex with 217 bp phage Mu SGS DNA and albicidin stabilised by ADPNP [14469 multi-frame micrographs composed of 40 frames each in TIFF format] | Michalczyk E, Ghilarov D [Pubmed: 36741192] [DOI: 10.1038/s41929-022-00904-1] |
5.1 TB | 3.06 Å |
| 2023-11-07 |  |
Single particle cryo-EM dataset of extended cowpea chlorotic mottle virus in plunge-frozen vitrified ice [multiple data sets in EER format] | Harder OF, Barrass SV, Drabbels M, Lorenz UJ [Pubmed: 37704664] [DOI: 10.1038/s41467-023-41444-x] |
5.1 TB | 3.9 Å |
| 2022-03-28 |  |
Single particle Cryo-EM data set for study the structural basis of Phosphatidylinositol 3-kinase type 2α (PI3KC2α) [multiple data sets in MRC format] | Lo WT, Zhang Y, Vadas O, Roske Y, Gulluni F, De Santis MC, Zagar AV, Stephanowitz H, Hirsch E, Liu F, Daumke O, Kudryashev M, Haucke V [Pubmed: 35256802] [DOI: 10.1038/s41594-022-00730-w] |
5.1 TB | 4.4 Å |
| 2022-04-25 |  |
CryoEM single particle dataset of alpha-latrocrustotoxin monomer [multiple data sets in TIFF format] | Gatsogiannis C, Chen M [Pubmed: 34845192] [DOI: 10.1038/s41467-021-26562-8] |
5.1 TB | 4.03 Å |
| 2022-01-21 |  |
Structural Insights of Transcriptionally Active, Full-Length Androgen Receptor Coactivator Complexes [1958 multi-frame micrographs composed of 50 frames each in MRC format] | Yu X, Yi P [Pubmed: 32668201] [DOI: 10.1016/j.molcel.2020.06.031] |
5.1 TB | 13.0 Å |
| 2024-02-09 |  |
5-HT2B receptor bound to LSD in complex with beta-arrestin1 obtained by cryo-electron microscopy (cryoEM) [9617 multi-frame micrographs composed of 50 frames each in TIFF format] | Barros-Alvarez X [Pubmed: 36087581] [DOI: 10.1016/j.neuron.2022.08.006] |
5.0 TB | 3.3 Å |
| 2021-11-05 |  |
CryoEM SPA dataset for NB21, SARS-Cov-2 and NB36 trimeric complex [9390 multi-frame micrographs composed of 63 frames each in TIFF format] | Huang W [Pubmed: 34344900] [DOI: 10.1038/s41467-021-24963-3] |
5.0 TB | 3.55 Å |
| 2023-01-30 |  |
Single particle cryo-EM dataset for E. coli MlaFEDB bound to MlaC [multiple data sets in MRC and TIFF formats] | MacRae MR, Coudray N, Bhabha G, Ekiert DC [Pubmed: 37100290] [DOI: 10.1016/j.jbc.2023.104744] |
5.0 TB | 6.6 Å |
| 2021-11-12 |  |
Nog1-TAP associated immature ribosomal particles from S.cerevisae depleted of rpL2 [4024 multi-frame micrographs composed of 40 frames each in MRC format] | Milkereit P, Pöll G [Pubmed: 34813592] [DOI: 10.1371/journal.pone.0252497] |
4.9 TB | 3.7 - 4.7 Å |
| 2023-10-13 |  |
Structure of the peroxisomal Pex1/Pex6 ATPase complex bound to a substrate [multiple data sets in TIFF format] | Rüttermann MR, Koci MK, Lill PL, Geladas EDG, Kaschani FK, Klink BUK, Erdmann RE, Gatsogiannis CG [Pubmed: 37741838] [DOI: 10.1038/s41467-023-41640-9] |
4.9 TB | 4.1 - 4.7 Å |
| 2023-08-11 |  |
Cryo-EM micrographs of BP-ffsy filaments [20808 multi-frame micrographs composed of 40 frames each in TIFF format] | Guo J, Egelman EH, Xu B, Wang F [Pubmed: 37217766] [DOI: 10.1038/s41565-023-01401-7] |
4.9 TB | 3.1 - 3.2 Å |
| 2022-01-24 |  |
Cryo-EM structures of TTYH2 in the abscence of calcium [multiple data sets in TIFF format] | Li B, Hoel CM, Brohawn SG [Pubmed: 34824283] [DOI: 10.1038/s41467-021-27283-8] |
4.8 TB | 3.89 - 3.96 Å |
| 2019-04-12 |  |
Cryo-EM reconstruction of heparin-induced 2N3R tau filaments [multiple data sets in MRC and MRCS formats] | Zhang W., Falcon B., Murzin A.G., Fan J, Crowther R.A., Goedert M., Scheres S.H.W. [Pubmed: 30720432] [DOI: 10.7554/eLife.43584] |
4.8 TB | 3.7 Å |
| 2020-11-23 |  |
Cryo-EM of PAC1 receptor bound to PACAP38 and Gs protein [7649 multi-frame micrographs composed of 62 frames each in TIFF format] | Liang YL, Belousoff MJ, Zhao P, Koole C, Fletcher MM, Truong TT, Julita V, Christopoulos G, Xu HE, Zhang Y, Khoshouei M, Christopoulos A, Danev R, Sexton PM, Wootten D [Pubmed: 32004469] [DOI: 10.1016/j.molcel.2020.01.012] |
4.8 TB | 2.65 - 3.01 Å |
