Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-11-27 |  |
Cryo-EM structure of the prefusion state of canine distemper virus fusion protein ectodomain [1604 multi-frame micrographs composed of 48 frames each in TIFF format] | Kalbermatter DK, Shrestha NS, Gall FMG, Wyss MW, Riedl RR, Plattet PP, Fotiadis DF [Pubmed: 32647825] [DOI: 10.1016/j.yjsbx.2020.100021] |
474.1 GB | 4.3 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compound 46 [921 multi-frame micrographs composed of 100 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
470.7 GB | 2.5 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compound 41q [1103 multi-frame micrographs composed of 80 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
470.7 GB | 2.8 Å |
| 2020-07-10 |  |
Cryo electron tomography - tilt-series of Sars-Cov-2 [266 tilt series in MRC format] | Turoňová B, Sikora M, Schürmann C, Hagen WJH, Welsch S, Blanc FEC, von Bülow S, Gecht M, Bagola K, Hörner C, van Zandbergen G, Landry J, de Azevedo NTD, Mosalaganti S, Schwarz A, Covino R, Mühlebach MD, Hummer G, Krijnse Locker J, Beck M [Pubmed: 32817270] [DOI: 10.1126/science.abd5223] |
469.8 GB | 4.9 - 7.9 Å |
| 2022-07-18 |  |
Staphylococcal self-loading helicases couple the staircase mechanism with inter domain high flexibility [3765 multi-frame micrographs composed of 40 frames each in TIFF format] | Qiao QCC, Mir Sanchis IMS [Pubmed: 35871290] [DOI: 10.1093/nar/gkac625] |
467.6 GB | 3.1 - 3.3 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to VM2 [1097 multi-frame micrographs composed of 80 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
465.0 GB | 2.6 Å |
| 2023-10-23 |  |
Cryo-EM structure of Niflumic Acid-bound human Anion Exchanger 1 [5274 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
463.1 GB | 3.18 Å |
| 2023-10-23 |  |
Cryo-EM structure of Bicarbonate-bound human Anion Exchanger 1 [5256 micrographs in MRC format] | Capper MJ, Yang S, Stone AC, Vatansever S, Zilberg G, Mathiharan YK, Habib R, Hutchinson K, Zhao Y, Schlessinger A, Mezei M, Osman R, Zhang B, Wacker D [Pubmed: 37679563] [DOI: 10.1038/s41594-023-01085-6] |
461.5 GB | 3.37 Å |
| 2022-01-21 |  |
Tilt series of EIAV CASPNC VLPs acquired on Krios G4 with Selectris X and Falcon 4 [multiple data sets in EER and MRC formats] | Obr M, Hagen WJ, Dick RA, Yu L, Kotecha A, Schur FK [Pubmed: 35351542] [DOI: 10.1016/j.jsb.2022.107852] |
461.4 GB | 2.9 - 3.4 Å |
| 2022-06-07 |  |
Cryo-EM Structure of the Hyperpolarization-Activated Potassium Channel KAT1 [1503 multi-frame micrographs composed of 40 frames each in MRC format] | Clark MD, Contreras GF, Shen R, Perozo E [Pubmed: 32461693] [DOI: 10.1038/s41586-020-2335-4] |
459.8 GB | 3.5 - 3.8 Å |
| 2022-02-07 |  |
Structure of human pannexin-1 with a blocked pore [1480 multi-frame micrographs composed of 19 frames each in TIFF format] | Kuzuya M, Hirano H, Hayashida K, Watanabe M, Kobayashi K, Terada T, Mahmood MI, Tama F, Tani K, Fujiyoshi Y, Oshima A [Pubmed: 35133866] [DOI: 10.1126/scisignal.abg6941] |
459.1 GB | 3.4 Å |
| 2021-03-24 |  |
Jack bean urease imaged at 39kX nominal magnification [286 multi-frame micrographs composed of 50 frames each in TIFF format] | Feathers JR, Spoth KA, Fromme JC [Pubmed: 33817625] [DOI: 10.1016/j.yjsbx.2021.100047] |
457.0 GB | 3.06 Å |
| 2023-06-16 |  |
Defective HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the absence of assembly cofactor IP6 [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
456.4 GB | 7.1 Å |
| 2022-12-13 |  |
Single particle cryo-EM dataset of the Vairimorpha necatrix 20S proteasome from sporoplasms [3277 multi-frame micrographs composed of 40 frames each in TIFF format] | Jespersen N, Ehrenbolger K, Winiger RR, Svedberg D, Vossbrinck CR, Barandun J [Pubmed: 36379934] [DOI: 10.1038/s41467-022-34691-x] |
453.8 GB | 3.22 Å |
| 2015-04-30 |  |
Human TRPA1 ion channel with agonist AITC [stack of 43585 particles in MRC format] | Paulsen CE, Armache JP, Gao Y, Cheng Y, Julius D [Pubmed: 25855297] [DOI: 10.1038/nature14367] |
453.0 GB | 4.24 Å |
| 2022-05-27 |  |
Human Xkr8-Basigin complex bound to Fab fragment [1998 multi-frame micrographs composed of 48 frames each in TIFF format] | Sakuragi T, Tsutsumi A, Kikkawa M, Nagata S [Pubmed: 34625749] [DOI: 10.1038/s41594-021-00665-8] |
451.5 GB | 3.8 Å |
| 2023-12-04 |  |
Structural architecture of the acidic region of the B domain of coagulation factor V [8429 micrographs in MRC format] | Mohammed BM, Basore K, Summers B, Pelc LA, Di Cera E [Pubmed: 33684942] [DOI: 10.1182/blood.2021010684] |
447.1 GB | 3.05 - 3.3 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compound 40o [1051 multi-frame micrographs composed of 80 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
446.9 GB | 2.5 Å |
| 2019-03-22 |  |
Cryo-EM reconstruction of heparin-induced 2N4R tau filaments [multiple data sets in MRC and TIFF formats] | Zhang W., Falcon B., Murzin A.G., Fan J, Crowther R.A., Goedert M., Scheres S.H.W. [Pubmed: 30720432] [DOI: 10.7554/eLife.43584] |
446.3 GB | 3.3 - 3.5 Å |
| 2023-07-10 |  |
Cryo electron tomography of Cytochalasin D-induced protrusions of Drosophila S2 cells - Datasets 1 - 4 [multiple data sets in TIFF and MRC formats] | Ventura Santos C, Carter AP, Rogers SL [Pubmed: 37034688] [DOI: 10.1101/2023.03.31.535077] |
446.0 GB | — |
| 2014-08-07 |  |
Structure of β-galactosidase at 3.2-Å resolution obtained by cryo-electron microscopy [multiple data sets in MRC and DM4 formats] | Bartesaghi A, Matthies D, Banerjee S, Merk A, Subramaniam S [Pubmed: 25071206] [DOI: 10.1073/pnas.1402809111] |
442.5 GB | 3.2 Å |
| 2021-10-18 |  |
E. coli MsbA in nanodiscs in complex with G247 [multiple data sets in MRC format] | Thélot FA, Liao M [Pubmed: 34554829] [DOI: 10.1126/science.abi9009] |
442.5 GB | 3.9 Å |
| 2019-04-18 |  |
Single particle cryoEM of mouse protocadherin gamma B6 [multiple data sets in MRC format] | Brasch J, Goodman KM, Potter CS, Carragher B, Honig B, Shapiro L, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
438.8 GB | 35.0 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compound 40e [855 multi-frame micrographs composed of 100 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
437.6 GB | 2.8 Å |
| 2020-08-18 |  |
Cryo Electron Tomograms of Membrane Fractions of Rabbit Skeletal Muscle for Structural Determination of RyR1 in SR Vesicles at subnanometer resolution [48 tilt series in MRC format] | Sanchez RM, Zhang Y, Chen W, Dietrich L, Kudryashev M [Pubmed: 32709843] [DOI: 10.1038/s41467-020-17466-0] |
435.8 GB | 9.1 Å |
