Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-02-12 |  |
cryo-EM single particle dataset of a DNA nanostructure called "The Pointer-v2" [2381 multi-frame micrographs composed of 62 frames each in MRCS format] | Kube M, Kohler F, Feigl E, Nagel-Yüksel B, Willner EM, Funke JJ, Gerling T, Stömmer P, Honemann MN, Martin TG, Scheres SHW, Dietz H [Pubmed: 33277481] [DOI: 10.1038/s41467-020-20020-7] |
9.0 TB | 7.4 Å |
| 2018-02-26 |  |
Cryo-EM reconstruction of a modified human Adenovirus C5 [231 multi-frame micrographs composed of 50 frames each in MRC format] | Schmid M, Ernst P, Honegger A, Suomalainen M, Zimmermann M, Braun L, Stauffer S, Thom C, Dreier B, Eibauer M, Kipar A, Vogel V, Greber UF, Medalia O, Plückthun A [Pubmed: 29386504] [DOI: 10.1038/s41467-017-02707-6] |
612.7 GB | 7.4 Å |
| 2021-11-09 |  |
Single particle cryo-EM of the complex between interphotoreceptor retinoid-binding protein and a monoclonal antibody [2649 multi-frame micrographs composed of 35 frames each in TIFF format] | Sears AE, Albiez S, Gulati S, Wang B, Kiser P, Kovacik L, Engel A, Stahlberg H, Palczewski K [Pubmed: 32860273] [DOI: 10.1096/fj.202000796RR] |
729.9 GB | 7.4 Å |
| 2021-11-26 |  |
Higher-order structures of the foot-and-mouth disease virus RNA-dependent RNA polymerase required for dynamic inter-molecular interactions involved in viral genome replication [5417 multi-frame micrographs composed of 79 frames each in MRC format] | Loundras EA, Streetley J, Herod MR, Thompson RF, Harris M, Bhella D, Stonehouse NJ [Pubmed: 35039618] [DOI: 10.1038/s42003-021-02989-z] |
8.1 TB | 7.3 Å |
| 2024-03-20 |  |
Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex [592 micrographs in MRC format] | Pennington LF, Gasser P, Kleinboelting S, Zhang C, Skiniotis G, Eggel A, Jardetzky TS [Pubmed: 34862384] [DOI: 10.1038/s41467-021-27397-z] |
52.0 GB | 7.29 Å |
| 2022-01-12 |  |
Motion corrected micrographs - purified SINV/EEEV particles and recombinant anti-EEEV Fab (EEEV-33) [2111 micrographs in MRC format] | Williamson LE, Gilliland Jr T, Yadav PK, Binshtein E, Bombardi R, Kose N, Nargi RS, Sutton RE, Durie CL, Armstrong E, Carnahan RH, Walker LM, Kim AS, Fox JM, Diamond MS, Ohi MD, Klimstra WB, Crowe Jr JE [Pubmed: 33301709] [DOI: 10.1016/j.cell.2020.11.011] |
111.8 GB | 7.24 Å |
| 2020-09-02 |  |
CryoEM reconstruction of ESCRT-III filament composed of IST1 NTD R16E K27E double mutant [stack of 4556 particles in MRCS format] | Nguyen HC, Talledge N, McCullough J, Sharma A, Moss FR, Iwasa JH, Vershinin MD, Sundquist WI, Frost A [Pubmed: 32251413] [DOI: 10.1038/s41594-020-0404-x] |
1.7 GB | 7.2 Å |
| 2023-02-27 |  |
Cryo-EM micrographs of full-length human BIRC6 dimer with a bound DIABLO (SMAC) homodimer [multiple data sets in EER format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
24.2 TB | 7.2 Å |
| 2024-04-02 |  |
Cryo-EM of SARS-CoV-1 5' proximal stem-loop 5 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
2.2 TB | 7.1 Å |
| 2022-06-27 |  |
DNA polymerase D temporarily connects primase to the CMG-like helicase before interacting with proliferating cell nuclear antigen [2378 multi-frame micrographs composed of 39 frames each in TIFF format] | Oki K, Yamagami T, Nagata M, Mayanagi K, Shirai T, Adachi N, Numata T, Ishino S, Ishino Y [Pubmed: 33849056] [DOI: 10.1093/nar/gkab243] |
1.7 TB | 7.1 Å |
| 2023-06-16 |  |
Defective HIV-1 capsid lattice assembled on 30-nm liposome scaffolds in the absence of assembly cofactor IP6 [696 multi-frame micrographs composed of 50 frames each in TIFF format] | Highland CMH, Dick RAD [Pubmed: 37094124] [DOI: 10.1073/pnas.2220545120] |
456.4 GB | 7.1 Å |
| 2021-01-13 |  |
Ribosome sample deposited using the chameleon (54 ms delay) [1569 multi-frame micrographs composed of 59 frames each in MRCS format] | Klebl DP, Gravett MSC, Kontziampasis D, Wright DJ, Bon RS, Monteiro DCF, Trebbin M, Sobott F, White HD, Darrow MC, Thompson RF, Muench SP [Pubmed: 32814033] [DOI: 10.1016/j.str.2020.07.018] |
2.8 TB | 7.1 Å |
| 2019-02-01 |  |
Cryo electron micrographs of RNA polymerase II transcribing a nucleosome [2719 multi-frame micrographs composed of 40 frames each in TIFF format] | Kujirai T, Ehara H, Fujino Y, Shirouzu M, Sekine S, Kurumizaka H [Pubmed: 30287617] [DOI: 10.1126/science.aau9904] |
1.4 TB | 7.0 Å |
| 2014-01-03 |  |
2D crystal images of the potassium channel MloK1 with and without cAMP ligand [multiple data sets in TIFF format] | Kowal J, Chami M, Baumgartner P, Arheit M, Chiu P-L, Rangl M, Scheuring S, Schroeder GF, Nimigean CM, Stahlberg H [Pubmed: 24469021] [DOI: 10.1038/ncomms4106] |
11.6 GB | 7.0 Å |
| 2015-02-23 |  |
Electron cryo-microscopy of ATP synthase dimers from Polytomella sp. [2829 multi-frame micrographs composed of 24 frames each in MRC format] | Allegretti M, Klusch N, Mills DJ, Vonck J, Kuehlbrandt W, Davies KM [Pubmed: 25707805] [DOI: 10.1038/nature14185] |
4.1 TB | 7.0 Å |
| 2021-03-05 |  |
Structure of the human U4/U6.U5 tri-snRNP [4812 micrographs in MRC format] | Stark H [Pubmed: 26912367] [DOI: 10.1126/science.aad2085] |
300.9 GB | 7.0 Å |
| 2020-03-23 |  |
Micrographs of E. coli 70S ribosomes collected at 100 keV using a hybrid pixel direct electron detector [127 multi-frame micrographs composed of 32 frames each in MRCS format] | Naydenova K, McMullan G, Peet MJ, Lee Y, Edwards PC, Chen S, Leahy E, Scotcher S, Henderson R, Russo CJ [Pubmed: 31709064] [DOI: 10.1107/S2052252519012612] |
4.0 GB | 7.0 Å |
| 2023-02-17 |  |
Cryo-EM micrographs of full-length human BIRC6 dimer [11578 multi-frame micrographs composed of 40 frames each in TIFF format] | Ehrmann JF, Grabarczyk DB, Clausen T [Pubmed: 36758105] [DOI: 10.1126/science.ade8873] |
3.0 TB | 7.0 Å |
| 2023-01-03 |  |
Apo C-terminal half of LRRK2 (I2020T) bound to microtubule [2379 multi-frame micrographs composed of 50 frames each in TIFF format] | Matyszewski M, Leschziner AE [Pubmed: 36510024] [DOI: 10.1038/s41594-022-00863-y] |
643.9 GB | 7.0 Å |
| 2021-10-26 |  |
The CryoEM Structure of Drosophila Flight Muscle Thick Filaments at 7Å Resolution [1510 multi-frame micrographs composed of 44 frames each in MRC format] | Daneshparvar N, Taylor DW, O'Leary TS, Rahmani H, Abbasiyeganeh F, Previs MJ, Taylor KA [Pubmed: 32718994] [DOI: 10.1101/2020.06.05.136580] |
8.7 TB | 7.0 - 8.0 Å |
| 2021-02-17 |  |
Raw cryo- and negative stain micrographs of a native extract from C. thermophilum used to reconstruct oxo acid dehydrogenase complexes [0 multi-frame micrographs composed of 0 frames each in MRC format] | Kastritis PLK [DOI: 10.1016/j.celrep.2021.108727] |
5.4 TB | 6.9 Å |
| 2023-07-18 |  |
Human alpha-catenin monomer [multiple data sets in MRC and TIFF formats] | Rangarajan ES, Smith EW, Izard T [Pubmed: 36928388] [DOI: 10.1038/s42003-023-04610-x] |
8.7 TB | 6.9 Å |
| 2023-07-25 |  |
AP2 bound to MSPE3D1 lipid nanodisc with tyrosine cargo peptide [12075 micrographs in MRC format] | Baker RW, Cannon KS, Sarsam R [Pubmed: 37364761] [DOI: 10.1016/j.jsb.2023.107989] |
1.0 TB | 6.8 Å |
| 2021-11-16 |  |
The cryo-EM structure of the CENP-A nucleosome in complex with the phosphorylated CENP-C:: CENP-A nucleosome in complex with phosphorylated CENP-C C-terminal domain(601-864) [6533 multi-frame micrographs composed of 50 frames each in TIFF format] | Ariyoshi M, Makino F, Watanabe R, Nakagawa R, Kato T, Namba K, Arimura Y, Fujita R, Kurumizaka H, Okumura EI, Hara M, Fukagawa T [Pubmed: 33463726] [DOI: 10.15252/embj.2020105671] |
1.4 TB | 6.8 Å |
| 2020-08-18 |  |
CryoEM structure of human CMG bound to AND-1 (CMGA) [1844 multi-frame micrographs composed of 23 frames each in MRC format] | Rzechorzek NJ, Hardwick SW, Chirgadze DY, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
1.3 TB | 6.77 Å |
