The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2018-01-03 | 3D reconstruction of cardiac mitochondria in earlly prenatal (G55/57) and mid term(G58/60) and term (G66/68) GP cardiomyocyte [341 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M, White K | 1.7 GB | — | |
2018-01-03 | 3D reconstruction of the cardiac mitochondria in Neaonate and Adult GP cardiomyocyte [262 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M, White K | 1.2 GB | — | |
2018-01-03 | 3D reconstruction of the tubular system of preterm G55/57, mid term G58/60 and term G66/68 of guinea pig left ventricles [318 multi-frame micrographs composed of 1 frames each in TIFF format] | Kashbour H, Taggart M | 2.9 GB | — | |
2018-03-09 | Apoferritin tutorial dataset for cisTEM [20 multi-frame micrographs composed of 50 frames each in MRC format] | Grant T, Rohou A, Grigorieff N [Pubmed: 29513216] [DOI: 10.7554/elife.35383] |
5.5 GB | — | |
2017-12-18 | CryoET of Mtb 20S proteasome single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
9.1 GB | — | |
2017-12-18 | CryoET of T20S proteasome single particle [multiple data sets in MRC format] | Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
12.4 GB | — | |
2017-12-18 | CryoET of T20S proteasome single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
235.3 GB | — | |
2017-12-18 | Phase plate cryoET of T20S proteasome single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
23.3 GB | — | |
2018-04-05 | CryoET of apoferritin with 0.5 mM TCEP single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
35.3 GB | — | |
2017-12-18 | CryoET of apoferritin single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
23.0 GB | — | |
2017-12-18 | CryoET of apoferritin single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
32.9 GB | — | |
2017-12-18 | CryoET of apoferritin single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
301.1 GB | — | |
2017-12-18 | CryoET of apoferritin single particle [multiple data sets in MRC format] | Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
29.2 GB | — | |
2017-12-18 | CryoET of apoferritin single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
46.1 GB | — | |
2017-12-15 | CryoET of DNAB helicase-helicase loader single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
120.1 GB | — | |
2017-12-15 | CryoET of glutamate dehydrogenase + 0.001% DDM single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
37.1 GB | — | |
2017-12-15 | CryoET of glutamate dehydrogenase single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
37.1 GB | — | |
2017-12-15 | CryoET of glutamate dehydrogenase single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
133.1 GB | — | |
2017-12-15 | CryoET of rabbit muscle aldolase single particle [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
43.5 GB | — | |
2017-12-15 | CryoET of rabbit muscle aldolase single particle super-res [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
998.3 GB | — | |
2017-12-18 | CryoET of hemagglutinin single particle with spot-to-plunge time of 800ms [multiple data sets in MRC format] | Noble AJ, Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice WJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
34.0 GB | — | |
2020-09-25 | A "drug sweeping" state of the TriABC triclosan efflux pump from Pseudomonas aeruginosa [multiple data sets in MRCS format] | Fabre L, Abigail LT, Ntreh AT, Amira A, Yazidi A, Inga IV, Weeks JW, Leus IV, Jon JW, Sudipta S, Ruickoldt J, Jakob J, Rouiller I, Zgurskaya HI, Isabelle I, Sygusch J, Helen HI, Jurgen J [Pubmed: 32966762] [DOI: 10.1016/j.str.2020.09.001] |
238.7 GB | 4.3 - 20.0 Å | |
2018-01-22 | Human TRPM4 ion channel in a lipid nanodisc in a calcium-bound state [stack of 221100 particles in MRCS format] | Autzen HE, Myasnikov AG, Campbell MG, Asarnow D, Julius D, Cheng Y [Pubmed: 29217581] [DOI: 10.1126/science.aar4510] |
84.4 GB | 3.1 Å | |
2018-01-22 | Human TRPM4 ion channel in a lipid nanodisc in a calcium-free state [stack of 45247 particles in MRCS format] | Autzen HE, Myasnikov AG, Campbell MG, Asarnow D, Julius D, Cheng Y [Pubmed: 29217581] [DOI: 10.1126/science.aar4510] |
162.5 GB | 3.2 Å | |
2018-10-17 | Cryo-ET reveals the macromolecular reorganization of S. pombe mitotic chromosomes in vivo [25 tilt series in MRC format] | Cai S, Chen C, Tan ZY, Huang Y, Shi J [Pubmed: 30297429] [DOI: 10.1073/pnas.1720476115] |
35.1 GB | — |