Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-06-12 |  |
Cryo electron tomography of PR/8/34 influenza A virus incubated with LSTc glycan [10 tilt series in TIFF format] | Huang QJ, Song K, Schiffer CA, Somasundaran M [Pubmed: 40244672] [DOI: 10.1073/pnas.2426427122] |
37.8 GB | 8.5 - 10.0 Å |
| 2025-06-12 |  |
Cryo electron tomography of PR/8/34 influenza A virus [10 tilt series in TIFF format] | Huang QJ, Song K, Schiffer CA, Somasundaran M [Pubmed: 40244672] [DOI: 10.1073/pnas.2426427122] |
26.5 GB | 8.5 - 10.0 Å |
| 2025-03-10 |  |
Cryo-electron micrographs of Cholinephosphotransferase in complex with diacylglycerol [multiple data sets in TIFF and MRC formats] | Roberts JR [Pubmed: 39747155] [DOI: 10.1038/s41467-024-55673-1] |
1.2 TB | 3.2 Å |
| 2025-03-17 |  |
Cryo electron micrographs of Kaposi’s sarcoma-associated herpesvirus glycoprotein B in post-fusion conformation [14633 multi-frame micrographs composed of 49 frames each in TIFF format] | Ito F, Zhen J, Xie G, Huang H, Silva JC, Wu T-T, Zhou ZH [Pubmed: 39818969] [DOI: 10.1128/jvi.01533-24] |
3.5 TB | 3.3 Å |
| 2025-02-21 |  |
movies for NKCC1 bound with bumetanide [6027 multi-frame micrographs composed of 40 frames each in TIFF format] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
1.5 TB | 2.5 Å |
| 2025-07-07 |  |
movies for NKCC1 bound with furosemide [multiple data sets in MRC and TIFF formats] | Cao E [Pubmed: 39875725] [DOI: 10.1038/s44318-025-00368-6] |
5.5 TB | 2.7 Å |
| 2025-03-19 |  |
Dataset of apoferritin on HexAuFoil grids [multiple data sets in TIFF format] | Weckener M, Naylor CE | 53.4 GB | — |
| 2025-03-20 |  |
Efficient cell-wide mapping of mitochondria in electron microscopic volumes using webKnossos [multiple data sets in TIFF format] | Jiang Y, Wang H, Boergens K, Rzepka N, Wang F, Hua Y [DOI: 10.1016/j.crmeth.2025.100989] |
996.4 GB | — |
| 2025-03-17 |  |
Cytoplasmic ribosomes on mitochondria alter the local membrane environment for protein import [multiple data sets in TIFF and MRC formats] | Chang YT, Barad BA, Rahmani H, Zid BM, Grotjahn DA [Pubmed: 39071314] [DOI: 10.1083/jcb.202407110] |
764.2 GB | 8.0 - 15.0 Å |
| 2025-07-03 |  |
Raw cryo-electron micrographs used in SPA reconstruction of MlaC in complex with a soluble construct of MlaD [9012 multi-frame micrographs composed of 50 frames each in TIFF format] | Wotherspoon PW, Bui SB, Sridhar PS, Bergeron JRCB, Knowles TJK [Pubmed: 39080293] [DOI: 10.1038/s41467-024-50615-3] |
1.5 TB | 4.35 - 4.38 Å |
| 2025-06-27 |  |
Structure of the 55LCC ATPase complex [multiple data sets in EER and MRC formats] | Foglizzo M, Degtjarik O, Zeqiraj E [Pubmed: 38554706] [DOI: 10.1016/j.cell.2024.03.002] |
9.7 TB | 4.5 Å |
| 2025-07-03 |  |
Cryo electron micrographs of DOPC vesicles after extrusion with a 50 nm filter [multiple data sets in TIFF and MRC formats] | Schönnenbeck PS, Junglas BJ, Sachse CS [DOI: 10.1101/2025.01.09.632183] |
183.7 GB | — |
| 2025-03-19 |  |
Cryo electron micrographs of 70% DOPG 30%DPPG vesicles [multiple data sets in TIFF and MRC formats] | Schönnenbeck PS, Junglas BJ, Sachse CS | 285.9 GB | — |
| 2025-03-19 |  |
Cryo electron micrographs of DOPC vesicles after extrusion with a 200 nm filter [multiple data sets in TIFF and MRC formats] | Schönnenbeck PS, Junglas BJ, Sachse CS | 261.9 GB | — |
| 2025-03-19 |  |
Cryo electron micrographs of DOPC vesicles after sonication [multiple data sets in TIFF and MRC formats] | Schönnenbeck PS, Junglas BJ, Sachse CS | 602.1 GB | — |
| 2025-02-10 |  |
Single particle analysis datasets of in vitro grown aSyn filaments [multiple data sets in MRC format] | Sicking K, Al-Azzani M, Outeiro TF, Fernandez-Busnadiego R [Pubmed: 39399048] [DOI: 10.1101/2024.09.23.24313864] |
1023.5 GB | 2.7 Å |
| 2025-05-08 |  |
Cryo-EM movies of human cardiac sodium channel [4967 multi-frame micrographs composed of 61 frames each in TIFF format] | Rupam RB | 2.5 TB | 3.6 - 3.9 Å |
| 2025-01-29 |  |
Volume electron microscopy of APEX2-DAB labeled thalamocortical projections in visual cortex L4 [4 reconstructed volumes in TIFF format] | Bosworth AP, Weiser Novak S, Manor U, Allen NJ [DOI: 10.1101/2023.03.02.529949] |
199.8 GB | — |
| 2025-01-21 |  |
Mouse LRRC8A(BRIL):D in GDN [multiple data sets in TIFF, MRCS and MRC formats] | Lurie A, Brohawn SG [DOI: 10.1101/2024.11.24.625074] |
3.0 TB | 3.3 - 3.4 Å |
| 2025-01-23 |  |
Movies of cagM∆ mutant Cag T4SS from Helicobacter pylori [2877 multi-frame micrographs composed of 60 frames each in TIFF format] | Roberts JR [Pubmed: 38631913] [DOI: 10.26508/lsa.202302560] |
885.9 GB | 8.5 Å |
| 2025-01-27 |  |
Movies of cagT∆ mutant Cag T4SS from Helicobacter pylori [3443 multi-frame micrographs composed of 34 frames each in TIFF format] | Roberts JR [Pubmed: 38631913] [DOI: 10.26508/lsa.202302560] |
741.3 GB | 8.0 Å |
| 2025-02-04 |  |
Structure of the IFN-lambda3/IFN-lambdaR1/IL-10Rbeta receptor complex with an engineered IL-10Rbeta [2928 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang B, Grubbe WS, Mendoza JL, Zhao M [Pubmed: 39827213] [DOI: 10.1038/s41467-025-56119-y] |
1.6 TB | 3.0 Å |
| 2025-06-27 |  |
PSI-LHCI supercomplex binding with Lhcas from C. subellipsoidea [multiple data sets in EER and MRC formats] | Tsai P.-C., Kato K., Shen J.-R., Akita F. [Pubmed: 39947506] [DOI: 10.1016/j.bbabio.2025.149543] |
8.0 TB | 1.92 - 2.06 Å |
| 2025-04-07 |  |
Dynamic microtubule plus end architecture in presence of EB3. [51 tilt series in TIFF format] | Saunders H.A.J., Van den Berg C.M., Hoogebeen R.A., Schweizer D., Stecker K.E., Roepman R., Howes S.C., Akhmanova A. [Pubmed: 39856351] [DOI: 10.1038/s41594-025-01483-y] |
75.9 GB | — |
| 2025-02-04 |  |
Microtubule plus end architecture in presence of the ciliary tip module. [34 tilt series in TIFF format] | Saunders H.A.J., Van den Berg C.M., Hoogebeen R.A., Schweizer D., Stecker K.E., Roepman R., Howes S.C., Akhmanova A. | 58.0 GB | — |
