Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, access to some data files is currently unavailable.
The period will be extended due to a serious problem.
We apologize for any inconvenience and appreciate your understanding.
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-08 |  |
Motion-corrected micrographs for herpesvirus helicase-primase complex bound to forked DNA [12555 micrographs in MRC format] | Baranovskiy AG, He Q, Suwa Y, Morstadt LM, Babayeva ND, Lim CJ, Tahirov TH [Pubmed: 41202142] [DOI: 10.1126/sciadv.adz1989] |
2.2 TB | 3.16 - 3.43 Å |
| 2025-12-08 |  |
Motion-corrected micrographs for herpesvirus helicase-primase complex bound to forked DNA with inhibitor Amenamevir [12660 micrographs in MRC format] | Baranovskiy AG, He Q, Suwa Y, Morstadt LM, Babayeva ND, Lim CJ, Tahirov TH [Pubmed: 41202142] [DOI: 10.1126/sciadv.adz1989] |
1.1 TB | 2.86 - 3.1 Å |
| 2025-12-08 |  |
Complex between human carboxyhemoglobin and Staphylococcus aureus hemophore IsdH [1 micrographs - focal pairs - unprocessed in TIFF format] | Buoli Comani V, De Bei O, Gragera M, Luisi BF, Bettati S [DOI: 10.1016/j.yjsbx.2025.100138] |
1.5 TB | 3.1 - 4.5 Å |
| 2025-12-07 |  |
Immunological and structural evaluation of the intranasally administrated CVB1 whole-virus and VLP vaccines [multiple data sets in MRC and TIFF formats] | Soppela S, Plavec Z, Grohn S, Jartti M, Oikarinen S, Laajala M, Marjomaki V, Butcher SJ, Hankaniemi MM, Mustonen I [Pubmed: 38978565] [DOI: 10.21203/rs.3.rs-4545395/v1] |
1.6 TB | 2.15 Å |
| 2025-12-07 |  |
Cryo electron micrographs of Arabidopsis thaliana H2A-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2 [multiple data sets in TIFF and MRCS formats] | Wang Y, Dong A | 2.8 TB | 3.22 - 3.47 Å |
| 2025-12-07 |  |
Cryo electron micrographs of Arabidopsis thaliana H2A.Z-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2 [multiple data sets in TIFF, MRC and MRCS formats] | Wang Y, Dong A | 2.0 TB | 2.71 - 2.9 Å |
| 2025-12-07 |  |
Cryo electron micrographs of Arabidopsis thaliana H2A.W-H3.3-nucleosome with Arabidopsis native 147bp DNA 15.2.2 [multiple data sets in TIFF and MRCS formats] | Wang Y, Dong A | 1.5 TB | 2.85 - 2.97 Å |
| 2025-12-07 |  |
PSI-LHCI of Euglena gracilis strain Z [7575 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Nakajima Y, Shen JR, Nagao R [Pubmed: 41171917] [DOI: 10.1126/sciadv.aea6241] |
1.4 TB | 2.83 Å |
| 2025-12-07 |  |
Raw images of human URAT1 (R477S) complexed with urate [10997 multi-frame micrographs composed of 32 frames each in TIFF format] | Hongwu Qian HW [Pubmed: 39146184] [DOI: 10.1016/j.celrep.2024.114628] |
4.9 TB | 3.8 Å |
| 2025-12-07 |  |
Cryo-EM structures of SbmA in inward-facing conformations bound to sybodies in detergent micelles (200 kV) [1585 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Ettema TW, Slotboom DJ | 305.4 GB | 3.14 - 3.96 Å |
| 2025-12-07 |  |
Cryo-EM structure of SbmA in the inward-facing-wide conformation in detergent micelles (200 kV) [847 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Ettema TW, Slotboom DJ | 163.0 GB | 3.36 Å |
| 2025-12-07 |  |
Cryo-EM structure of SbmA in the inward-facing-occluded conformation in lipid nanodiscs (200 kV) [1295 multi-frame micrographs composed of 60 frames each in TIFF format] | Thangaratnarajah C, Ettema TW, Slotboom DJ | 252.3 GB | 3.07 Å |
| 2025-12-07 |  |
Single particle Cryo EM of the C-terminal half of LRRK2 bound to RN277 [13972 multi-frame micrographs composed of 50 frames each in MRC format] | Sanz-Marillo M [Pubmed: 40465731] [DOI: 10.1126/sciadv.adt2050] |
13.5 TB | 3.35 Å |
| 2025-12-07 |  |
Raw tilt series of HERV-K Gag immature lattice [163 tilt series in MRC format] | Shen JS, Krebs A.S.K., Liu H.F.L., Howe A.H., Zhou Y.Z., Rey J.S.R., Levintov L.L., Perilla J.R.P., Zhang P.Z., Bartesaghi A.B. [Pubmed: 37333227] [DOI: 10.1101/2023.06.07.544027] |
1.4 TB | 3.2 Å |
| 2025-12-07 |  |
Genetically Encoded FerriTag as a Specific Label for Cryo-Electron Tomography [3 reconstructed volumes in MRC format] | Wang C, Khosrozadeh A, Iacovache I, Zuber B [Pubmed: 40925364] [DOI: 10.1016/j.str.2025.08.013] |
959.0 MB | — |
| 2025-12-07 |  |
Cryogenic electron tomography reveals helical organization of lipoprotein lipase in storage vesicles [19 stitched maps in MRC format] | Gunn KH, Wheless A, Neher SB [Pubmed: 40768583] [DOI: 10.1126/sciadv.adx8711] |
10.8 GB | 32.0 Å |
| 2025-12-07 |  |
Motion corrected .mrc images of Panx1 containing c-terminal activating domain stack 2 [3318 micrographs in MRC format] | Ehrlich JJ, Kawate T [Pubmed: 39671183] [DOI: 10.1073/pnas.2411898121] |
1.1 TB | 3.0 Å |
| 2025-12-07 |  |
SpCas9 with computationally designed SpCas9_b3 binder [15502 multi-frame micrographs composed of 40 frames each in MRC format] | Pacesa M, Nickel L, Correia BE [Pubmed: 39677777] [DOI: 10.1101/2024.09.30.615802] |
6.2 TB | 3.3 Å |
| 2025-12-07 |  |
Single particle Cryo-EM structure of the Pdr5 drug resistance transporter [multiple data sets in TIFF format] | Harris A, Wagner M, Du D, Raschka S, Nentwig LM, Gohlke H, Smits SHJ, Luisi BF, Schmitt L [Pubmed: 34489436] [DOI: 10.1038/s41467-021-25574-8] |
3.8 TB | 2.85 - 3.77 Å |
| 2025-12-07 |  |
Cryo-electron tomography of Caulobacter crescentus expressing mcherry-tagged WT-PopZ [18 tilt series in MRC format] | Lasker K, Park D, Deniz A | 55.3 GB | — |
| 2025-12-07 |  |
Transporter associated with antigen processing (TAP) bound to the 9-mer peptide RRYQKSTEL and ATP [4266 multi-frame micrographs composed of 40 frames each in TIFF format] | Lee J, Manon V, Chen J | 3.3 TB | 3.6 Å |
| 2025-12-07 |  |
Cryo-electron tomography of condensates formed by purified Caulobacter crescentus PopZ constructs [35 tilt series in MRC format] | Lasker K, Park D, Deniz A | 322.6 GB | — |
| 2025-12-07 |  |
Proton-powered peptide transporter SbmA in lipid nanodisc complexed with Fab S11-1 at pH 5.5 [6069 multi-frame micrographs composed of 40 frames each in TIFF format] | Ettema T.W., Thangaratnarajah C., Inaba-Inoue S., Stepien P., Heddle J.G.H., Stockner T., Pliotas C., Slotboom D.J., Beis K. | 2.4 TB | 3.44 - 3.58 Å |
| 2025-12-07 |  |
Cryo-EM micrographs of PbAbiF dimer bound to ncRNA [4272 multi-frame micrographs composed of 40 frames each in TIFF format] | Wilkinson ME, Zhang F [Pubmed: 39970912] [DOI: 10.1016/j.cell.2025.01.034] |
587.8 GB | 3.56 Å |
| 2025-12-07 |  |
Melbournevirus Mini variant Nucleosome [multiple data sets in EER and MRC formats] | Villalta A, Luger K [Pubmed: 40715086] [DOI: 10.1038/s41467-025-62031-2] |
3.6 TB | 4.41 Å |
