Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-02-08 |  |
Cryo electron tomography of whole mitochondria and released crista membranes isolated from Caenorhabditis elegans [multiple data sets in MRC format] | Buzzard E, McLaren M, Gold VAM [Pubmed: 38164968] [DOI: 10.1042/BCJ20230450] |
159.0 GB | 38.6 Å |
| 2020-04-14 |  |
Cryo-electron tomography of E. coli minicells [17 multi-frame micrographs composed of 5 frames each in MRC format] | Burt A., Desfosses A., Gutsche I., Clare D. K [Pubmed: 32029744] [DOI: 10.1038/s41467-020-14350-9] |
141.7 GB | 16.0 Å |
| 2020-02-18 |  |
Cryo-EM structure of an undocked innexin-6 hemichannel in phospholipids [933 micrographs in MRC format] | Burendei B, Shinozaki R, Watanabe M, Terada T, Tani K, Fujiyoshi Y, Oshima A [Pubmed: 32095518] [DOI: 10.1126/sciadv.aax3157] |
49.5 GB | 3.8 Å |
| 2020-02-18 |  |
Cryo-EM structure of an undocked innexin-6 hemichannel in detergent [497 micrographs in MRC format] | Burendei B, Shinozaki R, Watanabe M, Terada T, Tani K, Fujiyoshi Y, Oshima A [Pubmed: 32095518] [DOI: 10.1126/sciadv.aax3157] |
26.4 GB | 3.8 Å |
| 2020-02-18 |  |
Structure of an undocked hemichannel of the N-terminal-deleted INX-6 in a nanodisc [300 micrographs in MRC format] | Burendei B, Shinozaki R, Watanabe M, Terada T, Tani K, Fujiyoshi Y, Oshima A [Pubmed: 32095518] [DOI: 10.1126/sciadv.aax3157] |
15.9 GB | 3.6 Å |
| 2020-08-06 |  |
Cryo-EM Structure of GluD1-Orphan Delta Receptor Reveals a Novel Architecture in the Ionotropic Glutamate Receptor Family [3938 multi-frame micrographs composed of 40 frames each in MRC format] | Burada AP, Vinnakota R, Kumar J [Pubmed: 31925409] [DOI: 10.1038/s41594-019-0359-y] |
6.5 TB | 8.1 Å |
| 2022-09-06 |  |
Cryo-EM images of equine apo-ferritin recorded as demonstration of MeasureIce software [626 multi-frame micrographs composed of 8 frames each in TIFF format] | Brown HG [Pubmed: 35965271] [DOI: 10.1038/s42003-022-03698-x] |
127.4 GB | 1.88 Å |
| 2020-05-27 |  |
2.7 Angstrom cryo-EM reconstructions of glucose isomerase in the presence of substantial aberrations [202 multi-frame micrographs composed of 200 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.0 TB | 2.7 Å |
| 2020-05-27 |  |
2.6 Angstrom cryo-EM reconstructions of HemQ from Geobacillus in the presence of substantial aberrations [257 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.3 TB | 2.6 Å |
| 2020-05-26 |  |
2.3 Angstrom cryo-EM reconstructions of HemQ from Geobacillus [258 multi-frame micrographs composed of 100 frames each in MRCS format] | Bromberg R, Guo Y, Borek D, Otwinowski Z [DOI: 10.1107/S2052252520002444] |
1.4 TB | 2.32 Å |
| 2023-02-28 |  |
Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM [2370 multi-frame micrographs composed of 24 frames each in MRC format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] |
352.7 GB | 2.8 - 3.5 Å |
| 2023-02-28 |  |
Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM in the presence of IM1761092 [17203 multi-frame micrographs composed of 40 frames each in TIFF format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] EMD-14251 EMD-14252 EMD-14253 EMD-14254 EMD-14255 EMD-14256 EMD-14257 EMD-14258 EMD-14259 EMD-14260 EMD-14261 EMD-14262 EMD-14263 EMD-14264 EMD-14265 EMD-14266 EMD-14267 EMD-14268 EMD-14269 EMD-14270 EMD-14272 EMD-14273 EMD-14274 EMD-14275 EMD-14276 EMD-14277 EMD-14278 EMD-14279 EMD-14280 EMD-14281 EMD-14282 EMD-14283 EMD-14284 EMD-14285 EMD-14286 EMD-14287 EMD-14288 EMD-14289 EMD-14290 EMD-14291 EMD-14292 EMD-14293 EMD-14294 EMD-14295 EMD-14296 EMD-14297 EMD-14298 EMD-14299 EMD-14300 EMD-14301 EMD-14302 EMD-14303 EMD-14304 EMD-14305 EMD-14306 EMD-14307 EMD-14308 EMD-14309 EMD-14310 EMD-14311 |
6.5 TB | 2.17 - 2.68 Å |
| 2019-04-18 |  |
Single particle cryoEM of mouse protocadherin gamma B6 [multiple data sets in MRC format] | Brasch J, Goodman KM, Potter CS, Carragher B, Honig B, Shapiro L, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
438.8 GB | 35.0 Å |
| 2019-04-18 |  |
Single particle cryo electron tomography of mouse protocadherin gamma B6 [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
384.1 GB | 35.0 Å |
| 2019-04-18 |  |
CryoET of mouse protocadherin gamma B6 on membranes (without energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
363.4 GB | — |
| 2019-04-18 |  |
CryoET of mouse protocadherin gamma B6 on membranes (with energy filter) [multiple data sets in MRC format] | Brasch J, Goodman KM, Noble AJ, Mannepalli S, Bahna F, Rapp M, Dandey VP, Bepler T, Berger B, Maniatis T, Carragher B [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
411.3 GB | — |
| 2019-04-18 |  |
CryoET of cis-mutated mouse protocadherin gamma B6 on membranes [multiple data sets in MRC format] | Brasch J, Bepler T, Berger B, Maniatis T, Potter CS, Carragher B, Honig B, Shapiro L [Pubmed: 30971825] [DOI: 10.1038/s41586-019-1089-3] |
379.7 GB | — |
| 2020-10-28 |  |
The α-synuclein hereditary mutation E46K unlocks a more stable, pathogenic fibril structure [4919 multi-frame micrographs composed of 30 frames each in TIFF format] | Boyer DR, Li B, Sun C, Fan W, Zhou K, Hughes MP, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 32015135] [DOI: 10.1073/pnas.1917914117] |
897.9 GB | 2.5 Å |
| 2021-03-03 |  |
Cryo electron microscopy of alpha-synuclein H50Q fibrils [3577 multi-frame micrographs composed of 30 frames each in MRC format] | Boyer DR, Li B, Sun C, Fan W, Sawaya MR, Jiang L, Eisenberg DS [Pubmed: 31695184] [DOI: 10.1038/s41594-019-0322-y] |
595.3 GB | 3.3 Å |
| 2022-05-26 |  |
Cryo TEM single particle dataset of purified ChAdOx1/ADZ-1222 [2875 multi-frame micrographs composed of 40 frames each in TIFF format] | Boyd RJ, Baker AB [Pubmed: 34851659] [DOI: 10.1126/sciadv.abl8213] |
1.0 TB | 3.07 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the Fdx and upstream fork DNA [multiple data sets in MRC format] | Boyaci H, Chen J, Lilic M, Palka M, Mooney RA, Landick R, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
2.0 TB | 3.38 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to an inhibitor corallopyronin and de novo melted AP3 promoter DNA [multiple data sets in TIFF format] | Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
1.8 TB | 3.55 Å |
| 2022-01-28 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA bound to the de novo melted AP3 promoter DNA [8579 multi-frame micrographs composed of 50 frames each in MRC format] | Boyaci H, Chen J, Jansen R, Darst SA, Campbell EA [Pubmed: 30626968] [DOI: 10.1038/s41586-018-0840-5] |
1.8 TB | — |
| 2022-01-12 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA/Fdx [401 multi-frame micrographs composed of 50 frames each in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
220.5 GB | 3.38 Å |
| 2022-01-12 |  |
CryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme/RbpA [1381 multi-frame micrographs composed of 50 frames each in TIFF format] | Boyaci H, Chen J, Darst SA, Campbell EA [Pubmed: 29480804] [DOI: 10.7554/eLife.34823] |
838.9 GB | 3.38 Å |
