The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2024-03-22 | Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 5-24 in complex with prefusion SARS-CoV-2 spike glycoprotein [9221 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.4 TB | 3.9 Å | |
2021-05-14 | 3.9 Angstrom reconstruction of E.coli AcrB embedded in the liposome [5757 multi-frame micrographs composed of 32 frames each in MRCS format] | Yao X, Fan X, Yan N [Pubmed: 32680969] [DOI: 10.1073/pnas.2009385117] |
2.4 TB | 3.9 Å | |
2023-02-08 | PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S in the presence of Rycal ARM210 - RyR2-R2474S + ARM210 [11749 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.4 TB | 2.99 - 3.29 Å | |
2023-06-30 | E. coli 50S ribosome bound to compound streptogramin A analog 3336 [multiple data sets in MRC and TIFF formats] | Pellegrino J, Seiple IB, Fraser JS, Lee DJ | 2.4 TB | 2.09 Å | |
2020-09-28 | Single-particle cryo-EM of the human CDK-activating kinase in complex with THZ1 [4453 multi-frame micrographs composed of 69 frames each in TIFF format] | Greber BJ, Perez-Bertoldi JM, Lim K, Iavarone AT, Toso DB, Nogales E [Pubmed: 32855301] [DOI: 10.1073/pnas.2009627117] |
2.4 TB | 3.3 Å | |
2019-06-07 | Single particle reconstruction of 52 kDa apo-state streptavidin at 3.3 Angstrom resolution [1448 multi-frame micrographs composed of 32 frames each in MRC format] | Fan X, Wang J, Zhang X, Yang Z, Zhang JC, Zhao L, Peng HL, Lei J, Wang HW [Pubmed: 31160591] [DOI: 10.1038/s41467-019-10368-w] |
2.4 TB | 3.3 Å | |
2023-03-14 | LRRC8A-BRIL:C Heteromer in lipid nanodiscs [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.4 TB | 3.17 - 3.48 Å | |
2021-03-24 | Alpha-E-catenin ABD-F-actin complex [7317 multi-frame micrographs composed of 40 frames each in TIFF format] | Mei L, Alushin GM [Pubmed: 32969337] [DOI: 10.7554/eLife.62514] |
2.4 TB | 3.2 Å | |
2023-05-16 | CryoEM of E. coli RNA polymerase Sigma N bound to full duplex DNA fragment dhsU36 (-12T) [multiple data sets in TIFF, MRC and MRCS formats] | Mueller AU, Chen J, Wu M, Chiu C, Nixon BT, Campbell EA, Darst SA [Pubmed: 36972428] [DOI: 10.1073/pnas.2220874120] |
2.4 TB | 2.8 - 3.1 Å | |
2020-08-11 | Chicken CALHM1, 1 mM EDTA [10513 multi-frame micrographs composed of 50 frames each in TIFF format] | Syrjanen JL, Michalski K, Chou TH, Grant T, Rao S, Simorowski N, Tucker SJ, Grigorieff N, Furukawa H [Pubmed: 31988524] [DOI: 10.1038/s41594-019-0369-9] |
2.4 TB | 3.63 Å | |
2020-12-02 | Tetrameric Ptch1 complexed with ShhNp [5198 multi-frame micrographs composed of 32 frames each in MRC format] | Qian H, Yan N [Pubmed: 31127104] [DOI: 10.1038/s41467-019-10234-9] |
2.5 TB | 3.6 - 6.8 Å | |
2024-01-23 | SPA cryo-EM micrographs of chicken FANCD2-FANCI3D with ds 44-bpDNA [14842 multi-frame micrographs composed of 40 frames each in TIFF format] | Sijacki T, Alcon P, Chen ZA, McLaughlin SH, Shakeel S, Rappsilber J, Passmore LA [Pubmed: 36050501] [DOI: 10.1038/s41594-022-00820-9] |
2.5 TB | 3.53 Å | |
2019-05-07 | A collection of yeast cell cryo-ET data [1488 tilt series in MRC format] | Gan L, Ng CT, Chen C, Cai S [Pubmed: 27605704] [DOI: 10.1091/mbc.E16-07-0506] |
2.5 TB | — | |
2024-03-20 | Cryo-electron microscopy Structure of the Human Cannabinoid Receptor CB2-Gi Signaling Complex [multiple data sets in TIFF format] | Xing C, Zhuang Y, Xu TH, Feng Z, Zhou XE, Chen M, Wang L, Meng X, Xue Y, Wang J, Liu H, McGuire TF, Zhao G, Melcher K, Zhang C, Xu HE, Xie XQ [Pubmed: 32004460] [DOI: 10.1016/j.cell.2020.01.007] |
2.5 TB | 3.2 Å | |
2024-02-19 | Mouse heavy chain apoferritin in vitreous ice after laser-melting and revitrification [10421 multi-frame micrographs composed of 784 frames each in EER format] | Bongiovanni G, Harder OF, Voss JM, Drabbels M, Lorenz UJ [Pubmed: 37219589] [DOI: 10.1107/S2059798323003431] |
2.5 TB | 1.59 Å | |
2022-10-10 | Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae without inhibitors [9027 multi-frame micrographs composed of 59 frames each in TIFF format] | Kishikawa J, Ishikawa M, Masuya T, Murai M, Kitazumi Y, Butler NL, Kato T, Barquera B, Miyoshi H [Pubmed: 35882843] [DOI: 10.1038/s41467-022-31718-1] |
2.5 TB | 3.1 Å | |
2022-11-16 | Single particle cryo-EM of KdpFAB(Ser162-P, D307N)C in apo condition [multiple data sets in TIFF format] | Silberberg JM, Stock C, Hielkema L, Corey RA, Rheinberger J, Wunnicke D, Dubach VRA, Stansfeld PJ, Hänelt I, Paulino C [Pubmed: 36255052] [DOI: 10.7554/eLife.80988] |
2.5 TB | 3.4 - 3.7 Å | |
2022-07-26 | Cryo electron images of mitochondrial Hsp60 [8055 multi-frame micrographs composed of 22 frames each in TIFF format] | Walti MA [Pubmed: 34688687] [DOI: 10.1016/j.jmb.2021.167322] |
2.5 TB | 4.35 Å | |
2022-11-21 | Tau Paired Helical Filament from Alzheimer's Disease not incubated with EGCG [2651 multi-frame micrographs composed of 48 frames each in TIFF format] | Seidler PM, Murray KA, Boyer DR, Ge P, Sawaya MR, Eisenberg DS [Pubmed: 36114178] [DOI: 10.1038/s41467-022-32951-4] |
2.5 TB | 3.4 Å | |
2024-05-01 | Structure of human calcium-sensing receptor in complex with chimeric Gs (miniGis) protein in nanodiscs [29091 multi-frame micrographs composed of 50 frames each in MRC format] | Zuo H, Park J, Frangaj A, Ye J, Lu G, Manning JJ, Asher WB, Lu Z, Hu G, Wang L, Mendez J, Eng E, Zhang Z, Lin X, Grasucci R, Hendrickson WA, Clarke OB, Javitch JA, Conigrave AD, Fan QR [Pubmed: 38632411] [DOI: 10.1038/s41586-024-07331-1] |
2.5 TB | 3.6 Å | |
2023-09-22 | Cryo-EM micrographs of RESC1-RESC2 complex bound to gRNA [4420 multi-frame micrographs composed of 60 frames each in TIFF format] | Dolce LG, Nesterenko Y, Walther L, Weis F, Kowalinski E [Pubmed: 36999600] [DOI: 10.1093/nar/gkad217] |
2.5 TB | 4.7 Å | |
2023-10-18 | Cryo-EM of AtMSL10 K539E [3229 multi-frame micrographs composed of 42 frames each in MRC format] [3229 multi-frame micrographs composed of 42 frames each in MRC format] | Zhang J, Yuan P [Pubmed: 37805510] [DOI: 10.1038/s41467-023-42117-5] |
2.5 TB | 3.7 Å | |
2021-11-02 | Proton-powered peptide transporter SbmA in lipid nanodisc complexed with Fab S11-1 (SbmA-FabS11-1-MccB17) [7286 multi-frame micrographs composed of 40 frames each in TIFF format] | Ghilarov D, Inaba-Inoue S, Stepien P, Qu F, Michalczyk E, Pakosz Z, Nomura N, Ogasawara S, Walker GC, Rebuffat S, Iwata S, Heddle JG, Beis K [Pubmed: 34516884] [DOI: 10.1126/sciadv.abj5363] |
2.5 TB | 3.59 Å | |
2021-11-12 | Disease variant M854K MDA5-dsRNA filaments in complex with ADP-AlF4 [2177 multi-frame micrographs composed of 60 frames each in TIFF format] | Yu Q, Modis Y [Pubmed: 34795277] [DOI: 10.1038/s41467-021-27062-5] |
2.5 TB | 4.26 - 4.3 Å | |
2023-01-16 | Cryo-EM structures of the β3 adrenergic receptor bound to solabegron and isoproterenol [multiple data sets in TIFF format] | Nagiri C, Kobayashi K, Tomita A, Kato M, Yamashita K, Nishizawa T, Inoue A, Shihoya W, Nureki O [Pubmed: 35489202] [DOI: 10.1016/j.bbrc.2022.04.065] |
2.5 TB | 3.3 - 3.9 Å |