Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-02-28 |  |
GroEL on EG-grid stored for 3 months after graphene oxidation [1209 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
217.8 GB | 2.06 Å |
| 2023-02-28 |  |
GroEL on EG-grid [531 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
95.2 GB | 1.99 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (low particle density) [6149 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
1.1 TB | 2.08 Å |
| 2023-02-28 |  |
Beta-galactosidase on EG-grid [3500 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
369.6 GB | 1.81 Å |
| 2023-02-28 |  |
SARS-CoV-2 spike protein (1-up RBD) on EG-grid [1495 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
373.0 GB | 3.1 Å |
| 2023-02-28 |  |
SARS-CoV-2 spike protein (1-up RBD) on Quantifoil grid [2403 multi-frame micrographs composed of 60 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
594.8 GB | 3.23 Å |
| 2023-02-28 |  |
Apoferritin on EG-grid [7500 multi-frame micrographs composed of 64 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
841.1 GB | 1.29 Å |
| 2023-02-28 |  |
GroEL on hydrophilized graphene grid (high particle density) [700 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
133.7 GB | 2.09 Å |
| 2023-02-28 |  |
GAPDH on EG-grid [270 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
47.4 GB | 2.16 Å |
| 2023-02-28 |  |
Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM [2370 multi-frame micrographs composed of 24 frames each in MRC format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] |
352.7 GB | 2.8 - 3.5 Å |
| 2023-02-28 |  |
Single particle cryo-EM dataset of mitochondrial respiratory complex I from Bos taurus in DDM in the presence of IM1761092 [17203 multi-frame micrographs composed of 40 frames each in TIFF format] | Bridges HR, Blaza JN, Yin Z, Chung I, Pollak MN, Hirst J [Pubmed: 36701435] [DOI: 10.1126/science.ade3332] EMD-14251 EMD-14252 EMD-14253 EMD-14254 EMD-14255 EMD-14256 EMD-14257 EMD-14258 EMD-14259 EMD-14260 EMD-14261 EMD-14262 EMD-14263 EMD-14264 EMD-14265 EMD-14266 EMD-14267 EMD-14268 EMD-14269 EMD-14270 EMD-14272 EMD-14273 EMD-14274 EMD-14275 EMD-14276 EMD-14277 EMD-14278 EMD-14279 EMD-14280 EMD-14281 EMD-14282 EMD-14283 EMD-14284 EMD-14285 EMD-14286 EMD-14287 EMD-14288 EMD-14289 EMD-14290 EMD-14291 EMD-14292 EMD-14293 EMD-14294 EMD-14295 EMD-14296 EMD-14297 EMD-14298 EMD-14299 EMD-14300 EMD-14301 EMD-14302 EMD-14303 EMD-14304 EMD-14305 EMD-14306 EMD-14307 EMD-14308 EMD-14309 EMD-14310 EMD-14311 |
6.5 TB | 2.17 - 2.68 Å |
| 2023-03-01 |  |
CryoEM structure of Go-coupled 5-HT5AR in complex with Methylergometrine [10530 micrographs in MRC format] | Fay JF, Roth BL, Zhang S [Pubmed: 35835867] [DOI: 10.1038/s41594-022-00796-6] |
924.6 GB | 2.75 Å |
| 2023-03-01 |  |
CryoEM structure of full-length dimeric ClbP [3888 multi-frame micrographs composed of 50 frames each in TIFF format] | Velilla JA, Walsh RM, Gaudet R [Pubmed: 36253550] [DOI: 10.1038/s41589-022-01142-z] |
1.1 TB | 3.73 Å |
| 2023-03-02 |  |
Gordonia phage Ziko [5058 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.4 TB | 2.6 Å |
| 2023-03-02 |  |
Mycobacterium phage Cain [4638 multi-frame micrographs composed of 50 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.5 TB | 2.9 Å |
| 2023-03-02 |  |
Arthrobacter phage Bridgette [4303 multi-frame micrographs composed of 40 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.6 TB | 4.0 Å |
| 2023-03-03 |  |
Cryo-iDPC-STEM structure of TMV - convergence semi-angle 4.0 mrad [multiple data sets in TIFF format] | Lazić I, Wirix M, Leidl ML, Sachse C [Pubmed: 36064775] [DOI: 10.1038/s41592-022-01586-0] |
1.2 GB | 3.5 Å |
| 2023-03-13 |  |
mouse ACE2 receptor bound to SARS-CoV-2 variant Omicron BA.1 Spike [20892 multi-frame micrographs composed of 1568 frames each in EER format] | Ni D, Myasnikov A, Stahlberg S, Lau K [DOI: 10.1371/journal.ppat.1011206] |
10.6 TB | 3.03 - 3.22 Å |
| 2023-03-13 |  |
FIB-SEM images about Control/OPA1 KD NIH-3T3 cells [1984 multi-frame micrographs composed of 1 frames each in TIFF format] | Suga S, Nakamura K, Kawai H, Hirabayashi Y [DOI: 10.1101/2021.06.11.448083] |
46.8 GB | — |
| 2023-03-13 |  |
Tilt series of authentic mumps virus nucleocapsid isolated from lysate of chronically infected HeLa cells under arsenite stress [840 tilt series in TIFF format] | Zhang X, Mahamid J | 27.9 GB | 4.5 - 6.3 Å |
| 2023-03-14 |  |
LRRC8A-BRIL:C Heteromer in lipid nanodiscs [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.4 TB | 3.17 - 3.48 Å |
| 2023-03-14 |  |
LRRC8A-BRIL(T48D):C Heteromer in GDN [multiple data sets in TIFF and MRCS formats] | Kern DM, Brohawn SG [Pubmed: 36928458] [DOI: 10.1038/s41594-023-00944-6] |
2.1 TB | 3.1 - 4.32 Å |
| 2023-03-15 |  |
Performing Correlative Light and Electron Microscopy to reveal the structural organization and location of alpha-synuclein aggregation hotspots inside the neuron. [multiple data sets in DM4 and TIFF formats] | Choi ML, Chappard A, Singh BP, Maclachlan C, Rodrigues M, Fedotova E, Berezhnov AV, De S, Peddie C, Athauda D, Viridi GS, Zhang W, Evans JR, Wernick A, Zanjani ZS, Angelova PR, Esteras N, Vinikurov A, Morris K, Jeacock K, Tosatto L, Little D, Gissen P, Collinson L, Clarke DJ, Kunath T, Klenerman D, Abramov AY, Horrocks MH, Gandhi S [DOI: 10.1101/2022.06.07.494932] |
88.4 GB | — |
| 2023-03-16 |  |
HMP1/alpha-catenin binding with actin filaments [multiple data sets in TIFF and MRC formats] | Rangarajan ES, Smith EW, Izard T [Pubmed: 36539037] [DOI: 10.1016/j.jbc.2022.102817] |
16.9 TB | 3.36 Å |
| 2023-03-16 |  |
SBFSEM imaging of Leishmania haptomonads on the stomodeal valve in the sand fly [400 multi-frame micrographs composed of 1 frames each in MRC format] | Yanase R, Sunter JD [DOI: 10.1101/2022.10.28.514187] |
82.0 GB | — |
