Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-02-10 |  |
Unaligned movies for FANCD2 dimer [6218 multi-frame micrographs composed of 40 frames each in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
3.7 TB | 3.4 Å |
| 2021-02-10 |  |
Unaligned movies for ubFANCD2-FANCI + DNA [multiple data sets in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
4.5 TB | 3.8 Å |
| 2021-02-10 |  |
Cryo-EM structure of K+-bound hERG channel [1496 multi-frame micrographs composed of 50 frames each in TIFF format] | Asai T, Adachi N, Moriya T, Kawasaki M, Suzuki K, Senda T, Murata T [Pubmed: 33450182] [DOI: 10.1016/j.str.2020.12.007] |
1.4 TB | 3.9 Å |
| 2021-02-10 |  |
Cryo-EM structure of K+-bound hERG channel in the presence of astemizole [1865 multi-frame micrographs composed of 50 frames each in TIFF format] | Asai T, Adachi N, Moriya T, Kawasaki M, Suzuki K, Senda T, Murata T [Pubmed: 33450182] [DOI: 10.1016/j.str.2020.12.007] |
1.8 TB | 3.7 Å |
| 2021-02-05 |  |
Affinity-purified RqcH-ribosome-associated quality control complexes from Bacillus subtilis [7178 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
514.6 GB | 2.6 - 3.5 Å |
| 2021-02-05 |  |
Affinity-purified RqcP/YabO-ribosome-associated quality control complexes from Bacillus subtilis [5416 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Takada H, Murina V, Atkinson GC, Wilson DN, Hauryliuk V [Pubmed: 33259810] [DOI: 10.1016/j.molcel.2020.11.002] |
358.1 GB | 2.6 - 4.9 Å |
| 2021-02-05 |  |
High-resolution SARS-CoV-2 ORF3a dimer in an MSP1E3D1 lipid nanodisc [multiple data sets in EER format] | Kern DM, Hoel CM, Kotecha A, Brohawn SG [Pubmed: 34158638] [DOI: 10.1038/s41594-021-00619-0] |
3.2 TB | 2.08 Å |
| 2021-01-29 |  |
Cryo-EM structure of the human CDK-activating kinase bound to the clinical inhibitor ICEC0942 [multiple data sets in TIFF format] | Greber BJ, Remis J, Ali S, Nogales E [Pubmed: 33476598] [DOI: 10.1016/j.bpj.2020.12.030] |
3.8 TB | 2.5 - 2.6 Å |
| 2021-01-29 |  |
Cryo-EM dataset of human pre-Bact spliceosome [multiple data sets in MRC format] | Townsend C, Leelaram MN, Agafonov DE, Dybkov O, Will CL, Bertram K, Urlaub H, Kastner B, Stark H, Lührmann R [Pubmed: 33243851] [DOI: 10.1126/science.abc3753] |
584.5 GB | 3.9 - 8.0 Å |
| 2021-01-29 |  |
Structure of spastin bound to a glutamate-rich peptide implies a hand-over-hand mechanism of substrate translocation. [1200 multi-frame micrographs composed of 49 frames each in MRC format] | Han H, Schubert HL, Purdy MD, Yeager M, Sundquist WI, Hill CP [Pubmed: 31767681] [DOI: 10.1074/jbc.AC119.009890] |
1.8 TB | 4.2 Å |
| 2021-01-29 |  |
Single-particle cryo-EM dataset of the complex between a nucleosome and the regulatory linker of ALC1 [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 33357431] [DOI: 10.1016/j.celrep.2020.108529] |
6.8 TB | 2.5 - 3.0 Å |
| 2021-01-27 |  |
Cryo-EM structure of the Cas12f1-sgRNA-target DNA complex [2848 multi-frame micrographs composed of 48 frames each in TIFF format] | Takeda NS, Nakagawa R, Okazaki S, Hirano H, Kobayashi K, Kusakizako T, Nishizawa T, Yamashita K, Nishimasu H, Nureki O [Pubmed: 33333018] [DOI: 10.1016/j.molcel.2020.11.035] |
649.5 GB | 3.3 Å |
| 2021-01-22 |  |
Actin filament structure from focal adhesions of mouse embryonic fibroblasts [7 tilt series in MRC format] | Martins B, Sorrentino S, Chung WL, Tatli M, Medalia O, Eibauer M [Pubmed: 33476550] [DOI: 10.1016/j.str.2020.12.014] |
314.1 GB | 17.0 Å |
| 2021-01-22 |  |
Lipid-stabilised asymmetric open state of the 5-HT3A serotonin receptor [multiple data sets in MRC format] | Zhang Y, Dijkman PM, Zou R, Zandl-Lang M, Sanchez RM, Eckhardt-Strelau L, Köfeler H, Vogel H, Yuan S, Kudryashev M [Pubmed: 33594077] [DOI: 10.1038/s41467-021-21016-7] |
6.4 TB | 2.8 - 3.2 Å |
| 2021-01-22 |  |
SBF SEM images of a Zebrafish hindbrain macrophage containing 2 Toxoplasma gondii tachizoites [multiple data sets in DM4 format] | Peddie CJ, Domart MC, Collinson L [Pubmed: 32461265] [DOI: 10.1242/dmm.043091] |
16.5 GB | — |
| 2021-01-15 |  |
Transcription-translation coupling complex (TEC27_NusG_CHAPSO) [21 micrographs in MRC format] | Ebright RHE [Pubmed: 32820061] [DOI: 10.1126/science.abb5317] |
201.5 GB | 4.7 Å |
| 2021-01-13 |  |
Ribosome sample deposited using the chameleon (54 ms delay) [1569 multi-frame micrographs composed of 59 frames each in MRCS format] | Klebl DP, Gravett MSC, Kontziampasis D, Wright DJ, Bon RS, Monteiro DCF, Trebbin M, Sobott F, White HD, Darrow MC, Thompson RF, Muench SP [Pubmed: 32814033] [DOI: 10.1016/j.str.2020.07.018] |
2.8 TB | 7.1 Å |
| 2021-01-08 |  |
Nanoscale view of the Clostridium thermocellum cellulosome during cellulose degradation reveals an ecological strategy leading to phenotypic heterogeneity [37 tilt series in MRC format] | Tatli M, Moraïs S, Tovar-Herrera OE, Bomble Y, Bayer EA, Medalia O, Mizrahi I | 1004.3 MB | — |
| 2021-01-08 |  |
A lamin A/C variant causing striated muscle disease provides insights into filament organization [2 tilt series in MRC format] | Tatli M [Pubmed: 33536248] [DOI: 10.1242/jcs.256156] |
2.7 GB | — |
| 2020-12-22 |  |
MscS Nanodisc with N-terminal His-Tag [2376 multi-frame micrographs composed of 50 frames each in MRCS format] | Reddy B, Perozo E [Pubmed: 31880537] [DOI: 10.7554/eLife.50486] |
762.3 GB | 3.1 Å |
| 2020-12-22 |  |
Cryo electron microscopy single particle of PIKfyve lipid kinase complex [2838 multi-frame micrographs composed of 31 frames each in TIFF format] | Lees JA, Li P, Reinisch KM [Pubmed: 33098764] [DOI: 10.1016/j.molcel.2020.10.003] |
920.4 GB | 5.25 Å |
| 2020-12-22 |  |
CryoEM map and model of Nitrite Reductase at pH 6.2 [794 multi-frame micrographs composed of 49 frames each in MRC format] | Adachi N, Yamaguchi T, Moriya T, Kawasaki M, Koiwai K, Shinoda A, Yamada Y, Yumoto F, Kohzuma T, Senda T [Pubmed: 34217801] [DOI: 10.1016/j.jsb.2021.107768] |
1.2 TB | 2.99 Å |
| 2020-12-22 |  |
Single-particle Cryo-EM of the endogenous human BAF complex alone [4865 micrographs in MRC format] | Suzuki H, Mashtalir N, Kadoch C, Walz T [Pubmed: 33053319] [DOI: 10.1016/j.cell.2020.09.051] |
258.1 GB | 7.8 Å |
| 2020-12-21 |  |
CEM500K - A large-scale heterogeneous unlabeled cellular electron microscopy image dataset for deep learning. [496544 micrographs in TIFF format] | Conrad RW, Narayan K [DOI: 10.1101/2020.12.11.421792] |
16.6 GB | — |
| 2020-12-18 |  |
Cryo electron micrographs of digitonin-solubilized, amphipol-stabilized, sucrose-gradient-purified V. radiata mitochondrial membranes - mixed fraction containing CI*, CIII2 and SC III2+IV [9815 multi-frame micrographs composed of 118 frames each in TIFF format] | Maldonado M, Guo F, Letts JA [Pubmed: 33463523] [DOI: 10.7554/eLife.62047] |
6.7 TB | 3.2 - 3.9 Å |
