Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-11-11 |  |
Single-Particle CryoEM of Influenza Hemagglutinin (HA) Trimer Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
1.2 TB | 2.9 Å |
| 2020-12-09 |  |
CARD8-CT filament [1208 multi-frame micrographs composed of 50 frames each in TIFF format] | Robert Hollingsworth L, David L, Li Y, Sharif H, Fontana P, Fu TM, Wu H [Pubmed: 33420033] [DOI: 10.1038/s41467-020-20320-y] |
1.2 TB | 3.54 Å |
| 2022-11-15 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to bicuculline [988 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.2 TB | 3.69 Å |
| 2022-02-25 |  |
CryoEM structure of T20S proteasome at 3A from Tundra, 100kV microscope [5176 multi-frame micrographs composed of 18 frames each in MRC format] | Karia D, Koh AF, Yu L, Kotecha A | 1.2 TB | 3.0 Å |
| 2020-12-07 |  |
ASC-CARD:Caspase-1-CARD octamer [5377 multi-frame micrographs composed of 50 frames each in TIFF format] | Robert Hollingsworth L, David L, Li Y, Ruan J, Wu H [Pubmed: 33420033] [DOI: 10.1038/s41467-020-20320-y] |
1.2 TB | 5.0 Å |
| 2020-02-07 |  |
Cryo-EM reconstructions of tau filaments in chronic traumatic encephalopathy [multiple data sets in MRCS and MRC formats] | Falcon B, Zivanov J, Zhang W, Murzin AG, Garringer HJ, Vidal R, Crowther RA, Newell KL, Ghetti B, Goedert M, Scheres SHW [Pubmed: 30894745] [DOI: 10.1038/s41586-019-1026-5] |
1.2 TB | 2.3 - 3.4 Å |
| 2023-07-31 |  |
Cryo-EM micrographs of Pyn-YSPTSPpS fibers with Ca2+ [5669 multi-frame micrographs composed of 40 frames each in TIFF format] | Rich-New ST, Guo J, Bu B, Wang F [DOI: 10.1016/j.chempr.2023.04.023] |
1.2 TB | 3.0 Å |
| 2024-02-06 |  |
CryoEM structures of the human CLC-2-AK42 voltage gated chloride channel reveal a ball and chain gating mechanism [stack of 11498 particles in MRC format] | Xu M, Pintilie G, Liu Y, Chiu W, Maduke M | 1.2 TB | 2.46 Å |
| 2022-11-21 |  |
Micrographs of Rigid-Rod Aromatics BP-NBD [5610 multi-frame micrographs composed of 40 frames each in TIFF format] | Yi M, Wang F, Tan W, Hsieh JT, Egelman EH, Xu B [Pubmed: 35849554] [DOI: 10.1021/jacs.2c05491] |
1.2 TB | 2.4 Å |
| 2024-02-06 |  |
Human CPSF160-WDR33-CPSF30 complex bound to the PAS AAUAAA motif [multiple data sets in TIFF and DM4 formats] | Muckenfuss LM, Jinek M [Pubmed: 29358758] [DOI: 10.1038/s41594-017-0020-6] |
1.2 TB | 3.07 Å |
| 2020-01-31 |  |
CryoEM dataset containing multiple conformations of the asymmetric αVβ8 integrin bound to latent TGF-β on a holey carbon grid (strongly preferred orientations) [multiple data sets in TIFF, MRC and MRCS formats] | Campbell MG, Cheng Y [Pubmed: 31955848] [DOI: 10.1016/j.cell.2019.12.030] |
1.2 TB | 2.87 - 3.6 Å |
| 2023-06-29 |  |
E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1 [multiple data sets in TIFF and MRC formats] | Seiple IB, Pellegrino J, Fraser JS, Lee DJ | 1.3 TB | 2.35 Å |
| 2022-01-12 |  |
Raw movies and final particle stack for a dataset of bL17-limited E. coli ribosome assembly intermediates. [multiple data sets in MRCS and MRC formats] | Rabuck-Gibbons JN, Lyumkis D, Williamson JR [Pubmed: 34990602] [DOI: 10.1016/j.str.2021.12.005] EMD-24491 EMD-24492 EMD-24499 EMD-24508 EMD-24509 EMD-24510 EMD-24515 EMD-24517 EMD-24543 EMD-24520 EMD-24521 EMD-24527 EMD-24538 EMD-24539 EMD-24546 EMD-24550 EMD-24555 EMD-24558 EMD-24559 EMD-24561 EMD-24562 EMD-24563 EMD-24564 EMD-24565 EMD-24567 EMD-24568 EMD-24571 EMD-24573 EMD-24574 EMD-24626 EMD-24627 EMD-24631 EMD-24633 EMD-24634 EMD-24658 EMD-24659 EMD-24660 EMD-24661 EMD-24662 EMD-24669 EMD-24671 EMD-24673 |
1.3 TB | 4.5 - 13.6 Å |
| 2024-04-30 |  |
Cryo electron tomography - tilt-series of FIB-milled HEK293T cells under untreated and HHT-treated conditions [710 tilt series in MRC format] | Xing H, Welsch S, Turonova B, Beck M [Pubmed: 37410833] [DOI: 10.1126/science.adh1411] |
1.3 TB | 3.1 Å |
| 2023-02-01 |  |
Cryo-EM data and 2DTM results of entire sections of differentiated ER-HoxB8 cells [multiple data sets in TIFF and MRC formats] | Elferich JE, Schiroli GS, Scadden DS, Grigorieff NG [Pubmed: 36382886] [DOI: 10.7554/elife.80980] |
1.3 TB | — |
| 2021-11-16 |  |
The cryo-EM structure of the CENP-A nucleosome in complex with the phosphorylated CENP-C:: CENP-A nucleosome in complex with CENP-C motif (655-675) and CENP-N N-terminal domain (1-211) [4630 multi-frame micrographs composed of 50 frames each in TIFF format] | Ariyoshi M, Makino F, Watanabe R, Nakagawa R, Kato T, Namba K, Arimura Y, Fujita R, Kurumizaka H, Okumura EI, Hara M, Fukagawa T [Pubmed: 33463726] [DOI: 10.15252/embj.2020105671] |
1.3 TB | 4.2 Å |
| 2022-03-21 |  |
Structure of the agonist-bound GPCR dimer Ste2 [6944 multi-frame micrographs composed of 50 frames each in MRC format] | Velazhahan V, Tate CG [Pubmed: 35296853] [DOI: 10.1038/s41586-022-04498-3] |
1.3 TB | 3.46 - 3.53 Å |
| 2020-12-04 |  |
Structure of the class D GPCR Ste2 dimer coupled to two G proteins [multiple data sets in MRC and TIFF formats] | Velazhahan V, Ma N, Pándy-Szekeres G, Kooistra AJ, Lee Y, Gloriam DE, Vaidehi N, Tate CG [Pubmed: 33268889] [DOI: 10.1038/s41586-020-2994-1] |
1.3 TB | 3.3 Å |
| 2023-02-15 |  |
Enp1-TAP associated immature ribosomal particles from S. cerevisiae depleted of rpS21 [8303 multi-frame micrographs composed of 40 frames each in TIFF format] | Milkereit P, Pöll G [Pubmed: 36996028] [DOI: 10.1371/journal.pone.0283698] |
1.3 TB | 2.9 - 3.3 Å |
| 2023-12-11 |  |
SpCas9 bound to 16 nucleotide complementary DNA substrate [multiple data sets in TIFF and DM4 formats] | Pacesa M, Loeff L, Querques I, Muckenfuss LM, Sawicka M, Jinek M [Pubmed: 36002571] [DOI: 10.1038/s41586-022-05114-0] |
1.3 TB | 3.12 Å |
| 2020-08-18 |  |
CryoEM structure of human CMG bound to AND-1 (CMGA) [1844 multi-frame micrographs composed of 23 frames each in MRC format] | Rzechorzek NJ, Hardwick SW, Chirgadze DY, Pellegrini L [Pubmed: 32453425] [DOI: 10.1093/nar/gkaa429] |
1.3 TB | 6.77 Å |
| 2022-06-17 |  |
E. coli 50S ribosome bound to compounds VM2 and VS1 [multiple data sets in TIFF and MRC formats] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB | 1.3 TB | 2.29 Å |
| 2021-09-24 |  |
Oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract (lot1) [multiple data sets in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
1.3 TB | 3.5 - 5.5 Å |
| 2019-10-17 |  |
Cryo electron microscopy of TssA protein from T6SS of Vibrio cholerae. [multiple data sets in MRC and MRCS formats] | Nazarov S, Adaixo R, Basler M [Pubmed: 31403721] [DOI: 10.15252/embj.2018100825] |
1.3 TB | 3.9 Å |
| 2022-12-06 |  |
Single particle cryo-EM structure of RIG-I in complex with p1dsRNA [2460 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM [Pubmed: 36272408] [DOI: 10.1016/j.molcel.2022.09.029] |
1.3 TB | 3.54 Å |
