Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2020-08-18 |  |
Mechanism of Ribosome Rescue by Alternative Release Factor B [multiple data sets in MRC format] | Chan K-H, Petrychenko V, Mueller C, Maracci C, Holtkamp W, Wilson DN, Fischer N, Rodnina MV [Pubmed: 32796827] [DOI: 10.1038/s41467-020-17853-7] |
788.2 GB | 2.6 - 3.7 Å |
| 2022-02-08 |  |
Structure of C-terminal deleted human pannexin-1 in nanodisc [2383 multi-frame micrographs composed of 20 frames each in TIFF format] | Kuzuya M, Hirano H, Hayashida K, Watanabe M, Kobayashi K, Terada T, Mahmood MI, Tama F, Tani K, Fujiyoshi Y, Oshima A [Pubmed: 35133866] [DOI: 10.1126/scisignal.abg6941] |
784.4 GB | 3.6 Å |
| 2020-06-29 |  |
Sub-3 Å Apoferritin Structure Determined With Full Range of Phase Shifts Using A Single Position Of Volta Phase Plate [multiple data sets in MRC and TIFF formats] | Li K [Pubmed: 30928614] [DOI: 10.1016/j.jsb.2019.03.007] |
778.8 GB | 2.51 - 2.94 Å |
| 2021-09-22 |  |
Mono nucleosome fraction from metaphase chromosome in Xenopus egg extract lot1 [1792 multi-frame micrographs composed of 50 frames each in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
778.6 GB | 5.64 Å |
| 2021-09-22 |  |
Open linker DNA nucleosome reconstituted with GUB DNA [1576 multi-frame micrographs composed of 50 frames each in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
777.0 GB | 4.52 Å |
| 2023-06-07 |  |
Cryo-electron micrographs of Hantaan virus polymerase in pre-initiation state [3261 multi-frame micrographs composed of 50 frames each in TIFF format] | Durieux Trouilleton Q, Arragain B, Malet H [Pubmed: 37221161] [DOI: 10.1038/s41467-023-38555-w] |
776.9 GB | 3.36 Å |
| 2022-09-23 |  |
CryoEM structure of the nucleotide-free and open channel A.aeolicus WzmWzt transporter [3048 multi-frame micrographs composed of 40 frames each in TIFF format] | Spellmon N [Pubmed: 36064941] [DOI: 10.1038/s41467-022-32597-2] |
776.8 GB | 4.1 Å |
| 2023-07-07 |  |
Cryo-EM SPA dataset for Antibody SKV09 in complex with VEEV VLP (K3 movies/.tif files) [5595 multi-frame micrographs composed of 40 frames each in TIFF format] | Casner RG [Pubmed: 37295404] [DOI: 10.1016/j.cell.2023.05.019] |
776.7 GB | 6.0 Å |
| 2019-01-17 |  |
CryoEM reconstruction of native lens connexin-46/50 at 3.4 angstrom resolution [multiple data sets in MRC format] | Myers JB, Reichow SL [Pubmed: 30542154] [DOI: 10.1038/s41586-018-0786-7] |
774.5 GB | 3.4 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 5 [707 multi-frame micrographs composed of 60 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
773.8 GB | 3.2 Å |
| 2021-06-04 |  |
Bacteriophage PhiKZ non-virion RNA Polymerase [8765 micrographs in MRC format] | de Martin Garrido N, Lai Wan Loong YTE, Aylett CHS [Pubmed: 34181731] [DOI: 10.1093/nar/gkab539] |
769.6 GB | 3.3 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 6 [590 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
768.0 GB | 2.5 Å |
| 2020-10-09 |  |
mouse cGAS with reconstituted nucleosome [5353 multi-frame micrographs composed of 40 frames each in MRC format] | Zhao B, Xu P [Pubmed: 32911481] [DOI: 10.1038/s41586-020-2749-z] |
767.6 GB | 2.98 Å |
| 2021-03-12 |  |
Beta-galactosidase in complex with deoxygalacto-nojirimycin [598 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
765.8 GB | 2.3 Å |
| 2021-04-14 |  |
Cryo-electron tomography of the metazoan membrane-assembled retromer:SNX3 coat containing Wls cargo motif [multiple data sets in TIFF and MRC formats] | Leneva N, Kovtun O, Morado DR, Briggs JAG, Owen DJ [Pubmed: 33762348] [DOI: 10.1126/sciadv.abf8598] |
764.9 GB | 8.9 - 9.5 Å |
| 2023-02-01 |  |
Mycobacterium phage Che8 [1203 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
763.1 GB | 2.5 Å |
| 2020-12-22 |  |
MscS Nanodisc with N-terminal His-Tag [2376 multi-frame micrographs composed of 50 frames each in MRCS format] | Reddy B, Perozo E [Pubmed: 31880537] [DOI: 10.7554/eLife.50486] |
762.3 GB | 3.1 Å |
| 2023-02-27 |  |
Gordonia phage Cozz [2799 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
759.4 GB | 2.6 Å |
| 2020-08-25 |  |
Structures of the human mitochondrial ribosome bound to EF-G1 reveal distinct features of mitochondrial translation elongation [stack of 6649 particles in MRC format] | Bhargava K, Datta PP, Kaushal PS, Keshavan P, Spremulli LL, Banavali NK [Pubmed: 32737313] [DOI: 10.1038/s41467-020-17715-2] |
753.5 GB | 2.96 - 3.96 Å |
| 2023-04-13 |  |
Cryo electron microscopy of DNA Polymerase alpha - primase bound to SARS-CoV-2 nsp1 virulence factor [2919 multi-frame micrographs composed of 48 frames each in TIFF format] | Kilkenny ML, Pellegrini L [Pubmed: 34719824] [DOI: 10.1002/pro.4220] |
751.3 GB | 4.12 - 4.4 Å |
| 2021-09-24 |  |
Mono nucleosome fraction from interphase chromosome in Xenopus egg extract lot1 [1656 multi-frame micrographs composed of 50 frames each in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
749.0 GB | 5.12 Å |
| 2024-02-06 |  |
Cryo-EM structure of neutralizing antibody 1-57 in complex with prefusion SARS-CoV-2 spike glycoprotein [2735 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Rapp M, Guo Y, Bahna F, Bimela J, Reddem ER, Yu J, Wang P, Liu L, Huang Y, Ho DD, Kwong PD, Sheng Z, Shapiro L [Pubmed: 34111408] [DOI: 10.1016/j.str.2021.05.014] |
746.5 GB | 3.42 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 10 [572 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
745.1 GB | 2.7 Å |
| 2022-04-29 |  |
Cryogenic electron microscopy structure of full length human meta vinculin [3005 multi-frame micrographs composed of 40 frames each in TIFF format] | Izard T, Rangarajan ES [Pubmed: 33440717] [DOI: 10.3390/ijms22020645] |
744.8 GB | 4.15 - 4.5 Å |
| 2019-05-09 |  |
apo-LRRC8A in MSP2N2 nanodiscs [1779 multi-frame micrographs composed of 50 frames each in MRCS format] | Kern DM [Pubmed: 30775971] [DOI: 10.7554/eLife.42636] |
739.5 GB | 4.18 Å |
