EMPIAR-PDBj - Electron Microscopy Public Image Archive

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Release date	Imageset	Title	Authors and references	Size	Resolution
2026-03-13	EMPIAR-13281	cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 2 [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	741.0 GB	—
2026-03-13	EMPIAR-13289	cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 1 [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	528.5 GB	—
2026-03-12	EMPIAR-12775	Single particle dataset of respiratory complex I from Paracoccus dentrificans in cMSP26 nanodiscs [1157 multi-frame micrographs composed of 40 frames each in TIFF format]	Ivanov BS [Pubmed: 40781353] [DOI: 10.1038/s41598-025-15035-3] EMD-53583	334.6 GB	3.1 Å
2026-03-12	EMPIAR-13287	cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 3 [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	350.1 GB	—
2026-03-12	EMPIAR-13288	cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 4 [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	342.3 GB	—
2026-03-12	EMPIAR-13301	cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 5 [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	122.7 GB	—
2026-03-12	EMPIAR-13302	cryo electron tomography of mouse hippocampal CA1 stratum radiatum - dataset 6 [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	47.9 GB	—
2026-03-12	EMPIAR-13303	cryo electron tomography of mouse hippocampal CA1-py dataset [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	175.8 GB	—
2026-03-12	EMPIAR-13304	cryo electron tomography of mouse cortex [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	168.9 GB	—
2026-03-12	EMPIAR-13314	cryo electron tomography of a planar lift-out from mouse hippocampus CA1 spanning CA1-py through CA1-slm. [multiple data sets in EER and MRC formats]	Glynn CG, Smith JLRS [Pubmed: 40527314] [DOI: 10.1016/j.jsb.2016.06.024] EMD-55442	1.1 TB	—
2026-03-11	EMPIAR-13325	Single-particle cryo-electron microscopy analysis of a viral hyaluronan synthase bound to DDM [6655 multi-frame micrographs composed of 44 frames each in TIFF format]	Stephens Z, Zimmer J [Pubmed: 41280022] [DOI: 10.1101/2025.10.17.683186] EMD-73321 9yq2	1.6 TB	2.9 Å
2026-03-11	EMPIAR-13327	Single-particle cryo-electron microscopy analysis of a viral hyaluronan synthase bound to UDP-GlcA [4735 multi-frame micrographs composed of 40 frames each in TIFF format]	Stephens Z, Zimmer J [Pubmed: 41280022] [DOI: 10.1101/2025.10.17.683186] EMD-73323 EMD-73324 9yq4 9yq5	1.2 TB	2.8 - 3.3 Å
2026-03-10	EMPIAR-12751	Extended conformation of dusk state KaiC [15001 multi-frame micrographs composed of 50 frames each in TIFF format]	Dzimianski JV, Crosby P, Balasco Serrao VH, Partch CL EMD-70432 9ofh	5.9 TB	2.59 Å
2026-03-09	EMPIAR-12204	Cryo-EM structure of the large serine recombinase Bxb1 in complex with attP and attB [multiple data sets in TIFF format]	Soma T, Hiraizumi M, Yamashita K EMD-60887 EMD-60888 EMD-60889 EMD-60890 EMD-60891 EMD-60892 EMD-60893 EMD-60894 EMD-60895 EMD-60896 9iu2 9iu3 9iu4 9iu5 9iu6 9iu7 9iu8 9iu9 9iua 9iub	5.4 TB	3.08 - 4.08 Å
2026-03-09	EMPIAR-13150	Cryo electron microscopy of amyloid fibrils of recombinant full-length 2N4R tau complexed with unfractionated mouse liver RNA and seeded by Alzheimer’s disease tau fibrils [2169 multi-frame micrographs composed of 30 frames each in TIFF format]	Jiang YX, Sawaya MR, Abskharon R, Ge P, Boyer DR	833.0 GB	—
2026-03-09	EMPIAR-13153	Cryo electron microscopy of amyloid fibrils of recombinant full-length 2N4R tau complexed with mouse liver 18S ribosomal RNA [8412 multi-frame micrographs composed of 40 frames each in TIFF format]	Jiang YX, Sawaya MR, Abskharon R, Ge P, Boyer DR	4.5 TB	—
2026-03-09	EMPIAR-13203	100 kV apoferritin at 1.91 A with DECTRIS SINGLA detector on CRYO ARM 200 II [17424 multi-frame micrographs composed of 13500 frames each in BIG DATA VIEWER HDF5 format]	Danev R, Yanagisawa H, Yamashita K, Eisenstein F, Kikkawa M [DOI: 10.64898/2026.01.09.698548] EMD-68204	8.0 TB	1.91 Å
2026-03-09	EMPIAR-13272	Cryo-EM structure of the human Erlin2 complex [504 multi-frame micrographs composed of 32 frames each in TIFF format]	Jia XX, Liu GY, Li HW, Qian HW [Pubmed: 41481136] [DOI: 10.1093/jmcb/mjaf060] EMD-65913	221.8 GB	3.29 Å
2026-03-09	EMPIAR-13294	Micrographs that led to the structure of Cofilin, CAP, and CP on F-actin [multiple data sets in TIFF format]	Palmer NJ, Dominguez R [Pubmed: 38843827] [DOI: 10.1038/s41586-024-07637-0] EMD-44099 EMD-44135 EMD-72305 EMD-72506 EMD-72703 EMD-72711 EMD-72707 EMD-72307 EMD-72308 EMD-72306 9b27 9b3d 9q7k 9y52 9y9j 9y9m 9y9l 9q7m 9q7n 9q7l	18.8 TB	3.06 - 3.68 Å
2026-03-09	EMPIAR-13328	Single-particle cryo-electron microscopy analysis of a viral hyaluronan synthase bound to a GlcA-extended GlcNAc primer [3652 multi-frame micrographs composed of 40 frames each in TIFF format]	Stephens Z, Zimmer J [Pubmed: 39322765] [DOI: 10.1038/s41594-024-01389-1] EMD-40622 8snc	785.1 GB	3.2 Å
2026-03-09	EMPIAR-13334	Single-particle cryo-electron microscopy analysis of a viral hyaluronan synthase bound to a GlcNAc primer and UDP-GlcA [4623 multi-frame micrographs composed of 40 frames each in TIFF format]	Stephens Z, Zimmer J [Pubmed: 39322765] [DOI: 10.1038/s41594-024-01389-1] EMD-40623 8snd	1.2 TB	3.1 Å
2026-03-09	EMPIAR-13337	Single-particle cryo-electron microscopy analysis of a viral hyaluronan synthase bound to a GlcA-extended GlcNAc primer and UDP [9058 multi-frame micrographs composed of 40 frames each in TIFF format]	Stephens Z, Zimmer J [Pubmed: 39322765] [DOI: 10.1038/s41594-024-01389-1] EMD-40624 8sne	2.4 TB	3.0 Å
2026-03-09	EMPIAR-13344	Cryo-EM structure of a HOPS core complex containing Vps33, Vps16, and Vps18 [3600 multi-frame micrographs composed of 32 frames each in MRC format]	Port SA, Farrell PD, Jeffrey PD, DiMaio F, Hughson FM [DOI: 10.2210/pdb8DIT/pdb] EMD-27442 8dit	668.1 GB	5.1 Å
2026-03-07	EMPIAR-12700	Cryo-EM structure of spMETTL16 in complex with U6 snRNA and SAM [8497 multi-frame micrographs composed of 50 frames each in TIFF format]	Ju J, Tomita K [Pubmed: 40841561] [DOI: 10.1038/s41467-025-63021-0] EMD-63834 9u48	1.9 TB	2.99 Å
2026-03-06	EMPIAR-11932	Cryo electron microscopy of Zaire Ebolavirus virus-like particles [5897 multi-frame micrographs composed of 60 frames each in TIFF format]	Fujita-Fujiharu Y, Hu S, Hirabayashi A, Takamatsu Y, Ng YN, Houri K, Muramoto Y, Nakano M, Sugita Y, Noda T [Pubmed: 40064872] [DOI: 10.1038/s41467-025-57236-4] EMD-39081 8y9j	1.4 TB	4.6 Å

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Citations

prismPYP: Power-spectrum and image domain learning for self-supervised micrograph evaluation.

He L, Bartesaghi A. (2026)

CryoSIP: unleashing protein high-resolution Cryo-EM via semantic-instance collaborative picking.

Deng Y, Wang S, Xiang M, Li Y, Zhuo L, Cao D, Fu X, Zou Q. (2026)

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank.

Fonseca N, Duraisamy AK, Wang Z, Somasundharam S, Tayebinia M, de Oliveira LC, Ma M, Turner J, Patwardhan A, Kleywegt GJ, Hartley M, Morris KL. (2026)

CryoVirusDB: An Annotated Dataset for AI-Based Virus Particle Identification in Cryo-EM Micrographs.

Gyawali R, Dhakal A, Wang L, Cheng J. (2026)

Deep-learning methods for contrast enhancement and artifact reduction in cryo-electron tomography: a systematic analysis of the state of the art and proposed improvements.

Jones HN, Deshmukh A, Pande K. (2026)

CryoGS: High-Quality Cryo-EM Homogeneous Reconstruction by Gaussian Splatting

Zeng B, Liu S, Cheng S, Xu G, Fan H. (2026)

Point cloud deformation modeling for particle selection following cryo-EM 2D classification.

Wang X, Mo Z, Li F, Zhang F, Wan X. (2026)

ICECREAM: high-fidelity equivariant cryo-electron tomography.

Kishore V, Debarnot V, Righetto RD, Engel BD, Dokmanić I. (2026)

The vault associates with membranes in situ.

Geißler K, Kreysing JP, Wang Y, Glushkova D, Obarska-Kosinska A, Hoffmann PC, Böhm S, Schmidt A, Meier-Credo J, Langer JD, Hummer G, Beck M. (2026)