Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
大阪大學的EMPIAR-PDBj團隊為亞洲EM研究人員向EMPIAR傳送大型EM圖像數據提供服務。 除了通過互聯網將數據直接傳送到EBI（UK），研究人員還可以通過郵政或快遞服務將數據硬盤發送到大阪大學，或者通過互聯網傳送到設置於大阪大學的服務器，然後由我們代為傳送至數據登錄網站。 如果您想使用此項服務，請先通過 電子郵件 與我們聯繫。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-05-31 |  |
FIB-SEM of U2OS cell at leading edge of a wound assay, LPA stimulated, polarized [1798 multi-frame micrographs composed of 1 frames each in TIFF format] | Costa J, Pinto A, Machado P | 4.1 GB | — |
| 2022-05-31 |  |
FIB-SEM of U2OS cell at leading edge of a wound assay, non-LPA stimulated, non-polarized [998 multi-frame micrographs composed of 1 frames each in TIFF format] | Costa J, Pinto A, Machado P | 5.7 GB | — |
| 2022-05-31 |  |
Cryo-EM structure of human NKCC1 K289NA492E bound with bumetanide [4273 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhao YZ [Pubmed: 35585053] [DOI: 10.1038/s41467-022-30407-3] |
2.1 TB | 3.6 Å |
| 2022-05-27 |  |
Cryo electron-microscopy of TMEM106B fibrils extracted from four FTLD-TDP patient brains [multiple data sets in TIFF format] | Jiang YX, Cao Q, Sawaya MR, Abskharon R, Ge P, DeTure M, Dickson DW, Fu JY, Ogorzalek Loo RR, Loo JA, Eisenberg DS [Pubmed: 35344984] [DOI: 10.1038/s41586-022-04670-9] |
3.4 TB | 2.9 - 3.7 Å |
| 2022-05-27 |  |
Human Xkr8-Basigin complex bound to Fab fragment [1998 multi-frame micrographs composed of 48 frames each in TIFF format] | Sakuragi T, Tsutsumi A, Kikkawa M, Nagata S [Pubmed: 34625749] [DOI: 10.1038/s41594-021-00665-8] |
451.5 GB | 3.8 Å |
| 2022-05-27 |  |
Cryo-EM structure of human NKCC1 K289NA492EL671C bound with bumetanide [3891 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhao YZ [Pubmed: 35585053] [DOI: 10.1038/s41467-022-30407-3] |
1.8 TB | 2.9 Å |
| 2022-05-27 |  |
Cryo-EM structure of human NKCC1 K289NA492E bound with Furosemide [3405 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhao Y [Pubmed: 35585053] [DOI: 10.1038/s41467-022-30407-3] |
1.6 TB | 3.4 Å |
| 2022-05-26 |  |
Cryo TEM single particle dataset of purified ChAdOx1/ADZ-1222 [2875 multi-frame micrographs composed of 40 frames each in TIFF format] | Boyd RJ, Baker AB [Pubmed: 34851659] [DOI: 10.1126/sciadv.abl8213] |
1.0 TB | 3.07 Å |
| 2022-05-25 |  |
SARS-CoV-2 spike protein S:D614G + S:A222V variant [4841 micrographs in MRC format] | Ginex T, Marco-Marín C, Wieczór M, Mata CP, Krieger J, Ruiz-Rodriguez P, López-Redondo ML, Francés-Gómez C, Melero R, Sánchez-Sorzano CÓ, Martínez M, Gougeard N, Forcada-Nadal A, Zamora-Caballero S, Gozalbo-Rovira R, Sanz-Frasquet C, Arranz R, Bravo J, Rubio V, Marina A, Geller R, Comas I, Gil C, Coscolla M, Orozco M, Llácer JL, Carazo JM [Pubmed: 35816514] [DOI: 10.1371/journal.ppat.1010631] |
303.8 GB | 3.4 Å |
| 2022-05-25 |  |
A drug and ATP binding site in type 1 ryanodine receptor [6890 multi-frame micrographs composed of 50 frames each in TIFF format] | Melville Z, Dridi H, Yuan Q, Reiken S, Wronska A, Liu Y, Clarke OB, Marks AR [Pubmed: 35580609] [DOI: 10.1016/j.str.2022.04.010] |
1.5 TB | 2.45 Å |
| 2022-05-24 |  |
The complex of dephosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) and Lumacaftor (VX-809) [3191 multi-frame micrographs composed of 50 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
1.4 TB | 3.9 Å |
| 2022-05-24 |  |
The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Tezacaftor (VX-661) [4257 multi-frame micrographs composed of 50 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
1.8 TB | 3.8 Å |
| 2022-05-24 |  |
Cryo-EM data used for the determination of LACV-L structure in transcription early-elongation state [2510 multi-frame micrographs composed of 60 frames each in TIFF format] | Arragain B, Durieux Trouilleton Q, Baudin F, Provaznik J, Azevedo N, Cusack S, Schoehn G, Malet H [Pubmed: 35173159] [DOI: 10.1038/s41467-022-28428-z] |
721.4 GB | 3.3 Å |
| 2022-05-20 |  |
Parallel cryo electron tomography (PACE-tomo) of 70S ribosomes (200 kV, side-entry holder) [multiple data sets in MRC format] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
222.8 GB | 5.8 - 6.5 Å |
| 2022-05-20 |  |
Single-particle reconstruction of Tick-borne encephalitis virus (Final reconstruction) [multiple data sets in TIFF format] | Pulkkinen LIA, Barrass SV, Domanska A, Överby AK, Anastasina M, Butcher SJ [Pubmed: 35458522] [DOI: 10.3390/v14040792] |
16.4 TB | 3.3 Å |
| 2022-05-20 |  |
Single-particle reconstruction of Tick-borne encephalitis virus (Preparation 1) [14135 multi-frame micrographs composed of 30 frames each in MRC format] | Pulkkinen LIA, Barrass SV, Domanska A, Överby AK, Anastasina M, Butcher SJ [Pubmed: 35458522] [DOI: 10.3390/v14040792] |
6.2 TB | 3.5 Å |
| 2022-05-20 |  |
CEM1.5M : a cellular EM dataset containing ~1.5 x 106 unlabeled 2D image patches curated for deep learning [1592753 micrographs in TIFF format] | Narayan K | 57.6 GB | — |
| 2022-05-17 |  |
Structures of positive allosteric modulator-bound and unbound active human calcium-sensing receptor [13082 multi-frame micrographs composed of 60 frames each in TIFF format] | Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR [Pubmed: 34916296] [DOI: 10.1073/pnas.2115849118] |
3.8 TB | 2.7 Å |
| 2022-05-17 |  |
Cryo-EM structure of the human ATP13A2 [multiple data sets in TIFF format] | Tomita A, Daiho T, Kusakizako T, Yamashita K, Ogasawara S, Murata T, Nishizawa T, Nureki O [Pubmed: 34798056] [DOI: 10.1016/j.molcel.2021.11.001] |
3.8 TB | 3.54 - 3.92 Å |
| 2022-05-17 |  |
Conformational rearrangements upon start codon recognition in human 48S translation initiation complex [multiple data sets in MRC and MRCS formats] | Yi SH, Petrychenko V, Schliep JE, Goyal A, Linden A, Chari A, Urlaub H, Stark H, Rodnina MV, Adio S, Fischer N [Pubmed: 35489072] [DOI: 10.1093/nar/gkac283] |
1.1 TB | 3.7 - 4.7 Å |
| 2022-05-11 |  |
Cryo-EM SPA dataset of Megadalton-range protein communities from a Chaetomium thermophilum native cell extract [2808 multi-frame micrographs composed of 13 frames each in MRC format] | Skalidis IS, Kyrilis FLK, Tüting CT, Müller JM, Sorokina MS, Hamdi FH, Sadian YS, Chojnowski GC, Kastritis PLK [Pubmed: 34836937] [DOI: 10.1038/s41467-021-27287-4] |
1.1 TB | 3.84 - 4.52 Å |
| 2022-05-11 |  |
Tilt series and tomograms of cells expressing different non structural proteins (NSPs) of SARS-CoV-2 [multiple data sets in MRC format] | Polshchuk RS, Polishchuk E, De Matteis MA [Pubmed: 35551511] [DOI: 10.1038/s41586-022-04835-6] |
107.1 GB | — |
| 2022-05-10 |  |
CEM-MitoLab: a dataset of ~22K cellular EM 2D images with label maps of ~135K mitochondrial instances, for deep learning [43720 micrographs in TIFF format] | Narayan K, Conrad RW | 2.8 GB | — |
| 2022-05-03 |  |
In situ single particle classification reveals distinct 60S maturation intermediates in cells [multiple data sets in MRC format] | Lucas BA, Zhang K, Loerch S, Grigorieff N [DOI: 10.1101/2022.04.10.487797] |
10.5 GB | — |
| 2022-05-03 |  |
Cryo-EM Structures of Glucocorticoid Receptor-Hsp90-p23 [the GR Maturation Complex], Hsp90-p23, and MBP-Hsp90-p23 [multiple data sets in MRC format] | Noddings CM, Wang RY, Agard DA [Pubmed: 34937936] [DOI: 10.1038/s41586-021-04236-1] |
494.1 GB | 2.56 - 3.63 Å |
