Due to a storage failure, some data files are currently inaccessible.
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-05-14 | 3.9 Angstrom reconstruction of E.coli AcrB embedded in the liposome [5757 multi-frame micrographs composed of 32 frames each in MRCS format] | Yao X, Fan X, Yan N [Pubmed: 32680969] [DOI: 10.1073/pnas.2009385117] |
2.4 TB | 3.9 Å | |
| 2021-05-14 | TSC complex particles [1767 micrographs in MRC format] | Ramlaul K, Fu W, Li H, de Martin Garrido N, He L, Trivedi M, Cui W, Aylett CHS, Wu G [Pubmed: 33307091] [DOI: 10.1016/j.jmb.2020.166743] |
93.7 GB | 4.2 Å | |
| 2021-05-14 | Mixed capsids of MS2 virions [1809 micrographs in MRC format] | de Martin Garrido N, Crone MA, Ramlaul K, Simpson PA, Freemont PS, Aylett CHS [Pubmed: 31618483] [DOI: 10.1111/mmi.14406] |
113.1 GB | 3.9 Å | |
| 2021-05-10 | Yeast C, Ci, C*, and P complex spliceosomes [multiple data sets in TIFF and MRCS formats] | Wilkinson ME, Fica SM, Galej WP, Nagai K [Pubmed: 27459055] [DOI: 10.1038/nature19316] |
8.9 TB | 2.8 - 10.0 Å | |
| 2021-05-07 | The cryo-EM structure of vesivirus 2117 highlights functional variations in entry pathways for viruses in different clades of the vesivirus genus. [2000 multi-frame micrographs composed of 50 frames each in MRC format] | Sutherland H, Conley MJ, Emmott E, Streetley J, Goodfellow IG, Bhella D [Pubmed: 33853966] [DOI: 10.1128/JVI.00282-21] |
24.4 TB | 3.65 Å | |
| 2021-05-07 | Affinity-purified VgaA-LC in complex with 70S ribosomes from Staphylococcus aureus [3348 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
241.0 GB | 3.1 Å | |
| 2021-05-07 | Cryo-EM structures of human RNA Polymerase III [multiple data sets in TIFF and MRCS formats] | Girbig M, Misiaszek AD, Vorlaender MK, Mueller CW [Pubmed: 33558764] [DOI: 10.1038/s41594-020-00555-5] |
3.3 TB | 2.8 - 3.4 Å | |
| 2021-05-03 | Affinity-purified LsaA in complex with 70S ribosomes from Enterococcus faecalis [420 multi-frame micrographs composed of 40 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
82.3 GB | 2.9 Å | |
| 2021-05-03 | Affinity-purified VgaL in complex with 70S ribosomes from Listeria monocytogenes [1834 multi-frame micrographs composed of 20 frames each in TIFF format] | Crowe-McAuliffe CT, Murina V, Hauryliuk V, Wilson DN [Pubmed: 34117249] [DOI: 10.1038/s41467-021-23753-1] |
146.0 GB | 2.9 Å | |
| 2021-04-30 | FIB-SEM of Gemmata obscuriglobus - a species of the Planctomycetes phylum [1 stitched maps in TIFF format] | Seeger C, Dyrhage K, Mahajan M, Odelgard A, Bergström Lind S, Andersson SGE [DOI: 10.3389/fmicb.2021.643045] |
1.6 GB | — | |
| 2021-04-30 | FIB-SEM of Tuwongella immobilis - a species of the Planctomycetes phylum [1 multi-frame micrographs composed of 464 frames each in TIFF format] | Andersson SGE, Odelgard A, Dyrhage K, Mahajan M, Seeger C [DOI: 10.3389/fmicb.2021.643045] |
6.7 GB | — | |
| 2021-04-23 | Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format] | Ni T, Frosio T, Mendonça L, Sheng Y, Clare D, Himes BA, Zhang P [Pubmed: 35022621] [DOI: 10.1038/s41596-021-00648-5] |
12.8 GB | 4.5 Å | |
| 2021-04-22 | Human thyroglobulin [multiple data sets in TIFF format] | Coscia F, Taler-Vercic A, Chang VT, Sinn L, O'Reilly FJ, Izore T, Renko M, Berger I, Rappsilber J, Turk D, Lowe J [Pubmed: 32025030] [DOI: 10.1038/s41586-020-1995-4] |
1.7 TB | 3.6 Å | |
| 2021-04-15 | CryoEM structure of the CGRP receptor with bound CGRP peptide in a detergent micelle [5598 multi-frame micrographs composed of 71 frames each in TIFF format] | Josephs TM, Belousoff MJ, Liang YL, Piper SJ, Cao J, Garama DJ, Leach K, Gregory KJ, Christopoulos A, Hay DL, Danev R, Wootten D, Sexton PM [Pubmed: 33602864] [DOI: 10.1126/science.abf7258] |
1.6 TB | 3.49 Å | |
| 2021-04-14 | mouse MDA5-dsRNA filamemts in complex of 2mM ADP-AlF4 [multiple data sets in MRC format] | Yu Q, Qu K, Modis YE [Pubmed: 30449722] [DOI: 10.1016/j.molcel.2018.10.012] |
195.3 GB | 4.06 Å | |
| 2021-04-14 | Interleukin-10 signaling complex with IL-10RA and IL-10RB [9454 multi-frame micrographs composed of 50 frames each in TIFF format] | Saxton RA, Tsutsumi N, Gati C, Garcia KC [Pubmed: 33737461] [DOI: 10.1126/science.abc8433] |
5.4 TB | 3.5 Å | |
| 2021-04-14 | Micro X ray tomography of mesoscopic placental tissue [multiple data sets in TIFF and BIG DATA VIEWER HDF5 formats] | Tun W, Poologasundarampillai G, Bischof H, Nye G, King ONF, Basham M, Tokudome M, Lewis RM, Johnstone ED, Brownbill P, Darrow M, Chernyavsky IL | 75.3 GB | — | |
| 2021-04-14 | Micro X ray tomography of mesoscopic placental tissue [multiple data sets in TIFF and BIG DATA VIEWER HDF5 formats] | Tun WM, Poologasundarampillai G, Bischof H, Nye G, King ONF, Basham M, Tokudome Y, Lewis RM, Johnstone ED, Brownbill P, Darrow M, Chernyavsky IL [Pubmed: 34062108] [DOI: 10.1098/rsif.2021.0140] |
50.5 GB | — | |
| 2021-04-14 | Human NLRP1-DPP9 complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
2.3 TB | 3.6 Å | |
| 2021-04-14 | Human NLRP1-DPP9-VbP complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
1.2 TB | 2.9 Å | |
| 2021-04-14 | DNA origami signposts for identifying proteins on cell membranes by electron cryotomography [2 tilt series in MRC format] | Silvester E, Vollmer B, Pražák V, Vasishtan D, Machala EA, Whittle C, Black S, Bath J, Turberfield AJ, Grünewald K, Baker LA [Pubmed: 33606980] [DOI: 10.1016/j.cell.2021.01.033] |
38.8 MB | 36.44 Å | |
| 2021-04-14 | Nucleus as Fiducials for SXT and SIM Correlation [1 tilt series in TIFF format] | Okolo CA, Kounatidis I, Groen J, Nahas KL, Balint S, Fish T, Koronfel MA, López-Cortajarena A, Dobbie I, Pereiro E, Harkiolaki M | 2.5 GB | — | |
| 2021-04-14 | Cryo-electron tomography of the metazoan membrane-assembled retromer:SNX3 coat containing Wls cargo motif [multiple data sets in TIFF and MRC formats] | Leneva N, Kovtun O, Morado DR, Briggs JAG, Owen DJ [Pubmed: 33762348] [DOI: 10.1126/sciadv.abf8598] |
764.9 GB | 8.9 - 9.5 Å | |
| 2021-04-14 | Identification of a conserved virion-stabilizing network inside the interprotomer pocket of enteroviruses [multiple data sets in MRC format] | Flatt JW, Domanska A, Seppälä AL, Butcher SJ [Pubmed: 33637854] [DOI: 10.1038/s42003-021-01779-x] |
3.5 TB | 2.7 - 3.4 Å | |
| 2021-04-14 | SN-407-LRRC8A in MSP1E3D1 lipid nanodiscs [3576 multi-frame micrographs composed of 50 frames each in TIFF format] | Kern DM, Gerber EE, Brohawn SG [Pubmed: 35145074] [DOI: 10.1038/s41467-022-28435-0] |
2.7 TB | 3.65 Å |