Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-06-27 | Cryo-EM structures of TUG-1375/4-CMTB-bound active FFA2 and GLPG0974-bound inactive FFA2 [multiple data sets in TIFF format] | Kugawa M, Kawakami K, Kise R, Suomivuori CM, Tsujimura M, Kobayashi K, Kojima A, Inoue WJ, Fukuda M, Matsui TE, Fukunaga A, Kobayashi J, Kim S, Ikeda H, Yamashita K, Saito K, Ishikita H, Dror RO, Inoue A, Kato HE [Pubmed: 40140663] [DOI: 10.1038/s41467-025-57983-4] |
5.7 TB | 3.19 - 3.36 Å | |
| 2025-06-27 | PSI-LHCI supercomplex binding with Lhcas from C. subellipsoidea [multiple data sets in EER and MRC formats] | Tsai P.-C., Kato K., Shen J.-R., Akita F. [Pubmed: 39947506] [DOI: 10.1016/j.bbabio.2025.149543] |
8.0 TB | 1.92 - 2.06 Å | |
| 2025-06-27 | Structure of the 55LCC ATPase complex [multiple data sets in EER and MRC formats] | Foglizzo M, Degtjarik O, Zeqiraj E [Pubmed: 38554706] [DOI: 10.1016/j.cell.2024.03.002] |
9.7 TB | 4.5 Å | |
| 2025-06-27 | Multiple steps of dynein activation by Lis1 visualized by cryo-EM [multiple data sets in MRC format] | Kendrick AA, Nguyen KHV, Ma W, Karasmanis EP, Amaro RE, Reck-Peterson SL, Leschziner AE [Pubmed: 40410592] [DOI: 10.1038/s41594-025-01558-w] |
619.8 GB | 3.6 - 4.1 Å | |
| 2025-06-27 | Single particle cryo-EM micrographs of raiA RNA [multiple data sets in MRC format] | Kretsch RC, Wu Y, Shabalina SA, Lee H, Nye G, Koonin EV, Gao A, Chiu W, Das R [Pubmed: 40328315] [DOI: 10.1038/s41586-025-09073-0] |
855.3 GB | 2.9 Å | |
| 2025-06-27 | Single particle cryo-EM micrographs and particles of OLE RNA dimer [multiple data sets in MRC format] | Kretsch RC, Wu Y, Shabalina SA, Lee H, Nye G, Koonin EV, Gao A, Chiu W, Das R [Pubmed: 40328315] [DOI: 10.1038/s41586-025-09073-0] |
437.7 GB | 2.9 Å | |
| 2025-06-27 | CryoEM movies of human hemoglobin (Hb) in the presence of 25 uM sodium dithionite under Al's oil [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.9 TB | 2.37 - 2.55 Å | |
| 2025-06-26 | Cryo-EM SPA dataset of stably reduced Streptococcus pneumoniae NADPH oxidase with NADH [28120 multi-frame micrographs composed of 938 frames each in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
11.1 TB | 2.36 Å | |
| 2025-06-26 | Cryo-EM structures of SV2A in complex with antiepileptic drugs and botulinum neurotoxin A2 receptor-binding domain [multiple data sets in TIFF format] | Yamagata A, Ito K, Suzuki T, Dohmae N, Terada T, Shirouzu M [Pubmed: 38637505] [DOI: 10.1038/s41467-024-47322-4] |
6.6 TB | 2.82 - 3.38 Å | |
| 2025-06-26 | CryoEM movies of human methemoglobin (metHb) [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.9 TB | 2.78 - 3.01 Å | |
| 2025-06-26 | CryoEM movies of human methemoglobin (metHb) under Al's Oil [multiple data sets in EER and MRC formats] | Cook BD, Herzik Jr MA [Pubmed: 40229244] [DOI: 10.1038/s41467-025-58243-1] |
1.4 TB | 2.7 - 2.91 Å | |
| 2025-06-25 | Single particle cryo-EM of M. tuberculosis CoaX in complex with M. smegmatis Dop and Pup91 [11015 multi-frame micrographs composed of 40 frames each in TIFF format] | Chen J, Ekiert DC, Bhabha G, Yoo JH [Pubmed: 39585979] [DOI: 10.1073/pnas.2407239121] |
3.9 TB | 1.98 - 2.12 Å | |
| 2025-06-19 | Single-particle cryo-EM unaligned micrographs of antibody T5-1E08 in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57) [13653 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G [Pubmed: 40112805] [DOI: 10.1016/j.str.2025.02.010] |
3.4 TB | 2.97 Å | |
| 2025-06-19 | Mouse TMEM63b in LMNG-CHS micelle [multiple data sets in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 1.2 TB | 3.4 Å | |
| 2025-06-19 | Mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab [10051 multi-frame micrographs composed of 48 frames each in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 2.2 TB | 3.5 Å | |
| 2025-06-19 | Mouse TMEM63b in LMNG-CHS micelle with YN9303-24 Fab [multiple data sets in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 4.2 TB | 3.63 Å | |
| 2025-06-19 | Mouse TMEM63b in DDM-CHS micelle [multiple data sets in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 995.7 GB | 6.96 Å | |
| 2025-06-19 | Cryo-EM structure of Aquifex aeolicus RseP (wild-type) in complex with 4A9 Fab [11400 multi-frame micrographs composed of 64 frames each in TIFF format] | Asahi K, Hirose M, Aruga R, Kato T, Nogi T [Pubmed: 40009668] [DOI: 10.1126/sciadv.adu0925] |
2.7 TB | 3.95 Å | |
| 2025-06-19 | Cryo-EM structure of Aquifex aeolicus RseP (E18Q mutant) in complex with 4A9 Fab [15777 multi-frame micrographs composed of 66 frames each in TIFF format] | Asahi K, Hirose M, Aruga R, Kato T, Nogi T [Pubmed: 40009668] [DOI: 10.1126/sciadv.adu0925] |
3.8 TB | 3.61 Å | |
| 2025-06-19 | ATP-Dependent Diazotase, CmaA6 [7963 multi-frame micrographs composed of 158 frames each in EER format] | Kawai S, Karasawa M, Moriwaki Y, Terada T, Katsuyama Y, Ohnishi Y [Pubmed: 40275441] [DOI: 10.1002/anie.202505851] |
6.0 TB | 3.48 Å | |
| 2025-06-19 | Cryo-EM structure of F1-like ATPase for the gliding motility of Mycoplasma [7350 multi-frame micrographs composed of 40 frames each in TIFF format] | Toyonaga T, Kawamoto A, Miyata T [Pubmed: 40009674] [DOI: 10.1126/sciadv.adr9319] |
1.6 TB | 3.2 Å | |
| 2025-06-19 | Cryo-EM structure of human GLUT9 apo state [multiple data sets in TIFF format] | Matsushita D, Lee Y, Nishizawa T [Pubmed: 40186864] [DOI: 10.1016/j.celrep.2025.115514] |
4.3 TB | 3.06 Å | |
| 2025-06-19 | CRISPR-associated transposon post-transposition complex preliminary micrographs [1717 multi-frame micrographs composed of 40 frames each in MRC format] | Tenjo-Castaño F, Sofos N, Stutzke LS, Temperini P, Fuglsang A, Pape T, Mesa P, Montoya G [Pubmed: 38834066] [DOI: 10.1016/j.molcel.2024.05.005] |
1.2 TB | 2.3 Å | |
| 2025-06-19 | Cryo-electron microscopy micrographs of Hailong HalA in complex with oligodeoxyadenylate [10951 multi-frame micrographs composed of 55 frames each in TIFF format] | Tan JMJ, Cofsky JC, Kruse AC, Kranzusch PJ [Pubmed: 40306316] [DOI: 10.1038/s41586-025-09058-z] |
1.9 TB | 1.98 Å | |
| 2025-06-17 | Micrographs for DDB1-AMBRA1 WD40 complex [6732 micrographs in MRC format] | Su M.-Y. [Pubmed: 37993427] [DOI: 10.1038/s41467-023-43174-6] |
591.1 GB | 3.08 Å |