Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-07-23 | GLIC in MSP1E3D1 nanodisc at pH 5.5 [6626 multi-frame micrographs composed of 39 frames each in TIFF format] | Bharambe N, Li Z, Seiferth D, Balakrishna AM, Biggin PC, Basak S [Pubmed: 38580666] [DOI: 10.1038/s41467-024-47370-w] |
1.6 TB | 2.7 Å | |
| 2025-07-21 | Cryoelectron microscopy image of MreB R193C Escherichia coli cell [1 micrographs in MRC format] | Zietek M, Miguel A, Shi H, Khusainov I, Asmar A, Ram S, Wartel M, Sueki A, Schorb M, Goulian M, Collet J-F, Beck M, Huang KC, Typas A | 710.8 MB | — | |
| 2025-07-18 | The CryoEM structure of N49-P9.6-FR3 and PGT121 Fabs in complex with BG505 SOSIP.664 [multiple data sets in TIFF format] | Nguyen DN, Tolbert WD, Pazgier M [Pubmed: 40373766] [DOI: 10.1016/j.str.2025.04.016] |
702.0 GB | 4.02 Å | |
| 2025-07-16 | Single particle cryo-EM dataset of sarkosyl-insoluble fraction from tg-SwDI mouse mouse brain tissue containing amyloid-beta fibrils [25662 multi-frame micrographs composed of 700 frames each in EER format] | Zielinski M, Peralta Reyes FS, Gremer L, Schemmert S, Frieg B, Schäfer LU, Willuweit A, Donner L, Elvers M, Nilsson LNG, Syvänen S, Sehlin D, Ingelsson M, Willbold D, Schröder GF [Pubmed: 37973869] [DOI: 10.1038/s41593-023-01484-4] |
11.2 TB | 3.3 - 4.2 Å | |
| 2025-07-16 | A tomogram of a concave region on the nucleus of a neutrophil [57 multi-frame micrographs composed of 10 frames each in TIFF format] | Liu JQ, Li ZX, Guo Q, Du WJ, Yang J [Pubmed: 37983515] [DOI: 10.1073/pnas.2307389120] |
35.7 GB | — | |
| 2025-07-16 | Single-particle cryo electron microscopy of apo-Integrin a4b7 in the compact state [multiple data sets in TIFF, MRC and MRCS formats] | Hollis JA, Campbell MG [Pubmed: 40929264] [DOI: 10.1126/sciadv.adx9567] |
1.4 TB | 3.1 Å | |
| 2025-07-16 | CryoEM Structure of Bombus Flight Muscle Thick Filaments at 6Å Resolution [4476 micrographs in MRC format] | Li J, Rahmani H, Abbasi Yeganeh F, Rastegarpouyani H, Taylor DW, Wood NB, Previs MJ, Iwamoto H, Taylor KA [Pubmed: 36613818] [DOI: 10.3390/ijms24010377] |
4.1 TB | 6.0 Å | |
| 2025-07-16 | Full-length human cystathionine beta-synthase [2628 multi-frame micrographs composed of 1246 frames each in EER format] | McCorvie TJ, Basle A [Pubmed: 38575566] [DOI: 10.1038/s41467-024-46864-x] |
2.4 TB | 3.8 - 3.9 Å | |
| 2025-07-16 | Full-length human cystathionine beta-synthase with c-terminal his-tag [1740 multi-frame micrographs composed of 46 frames each in TIFF format] | McCorvie TJ, Basle A [Pubmed: 38575566] [DOI: 10.1038/s41467-024-46864-x] |
2.4 TB | 3.8 - 3.9 Å | |
| 2025-07-16 | Full-length human cystathionine beta-synthase with c-terminal his-tag in the presence of SAM [11220 multi-frame micrographs composed of 44 frames each in TIFF format] | McCorvie TJ, Basle A [Pubmed: 38575566] [DOI: 10.1038/s41467-024-46864-x] |
4.2 TB | 4.0 - 4.1 Å | |
| 2025-07-16 | Multi-frame cryo-EM images of a 69 kDa KRAS:G12C-2H11.4DS Fab complex [5013 multi-frame micrographs composed of 119 frames each in TIFF format] | Kung JE, Caleigh A [Pubmed: 38798381] [DOI: 10.1101/2024.05.10.593593] |
1.9 TB | 2.8 Å | |
| 2025-07-16 | Micrographs for mouse alpha synuclein [multiple data sets in MRC format] | Tatli M, Sokratian A, Zhou Y [Pubmed: 39485845] [DOI: 10.1126/sciadv.adq3539] |
467.9 GB | 2.9 - 3.1 Å | |
| 2025-07-14 | Multi-frame micrographs of a 74 kDa Ang2-5A12.6DS Fab complex in tiff format. [10063 multi-frame micrographs composed of 119 frames each in TIFF format] | Kung JE, Johnson MC [Pubmed: 38798381] [DOI: 10.1101/2024.05.10.593593] |
4.3 TB | 2.7 Å | |
| 2025-07-12 | Structural and functional insights into the enzymatic plasticity of the SARS-CoV-2 NiRAN domain [19338 multi-frame micrographs composed of 50 frames each in TIFF format] | Campbell EA, Small GI, Darst SA [Pubmed: 37890482] [DOI: 10.1016/j.molcel.2023.10.001] |
5.4 TB | 3.01 - 3.06 Å | |
| 2025-07-12 | Cryo-EM of SARS-CoV-2 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38427602] [DOI: 10.1073/pnas.2320493121] |
20.1 TB | 4.7 Å | |
| 2025-07-12 | Cryo-EM structure of the wild-type Thermus thermophilus 70S ribosome in complex with mRNA, A-site Q230-N5-methylated Release Factor 1, and P-site 2'-deoxy-A76-fMEAAAKC-peptidyl-tRNAcys [multiple data sets in TIFF and MRC formats] | Basu RS, Gagnon MG, Polikanov YS [Pubmed: 40536958] [DOI: 10.1126/science.ads9030] |
4.1 TB | 2.13 Å | |
| 2025-07-12 | Cryo-EM captures early intermediate steps in dynein activation by LIS1 [12792 multi-frame micrographs composed of 50 frames each in EER format] | Nguyen KHV, Karasmanis EP, Kendrick AA, Reck-Peterson SL, Leschziner AE | 10.9 TB | 2.7 - 6.2 Å | |
| 2025-07-10 | Cryo-EM SPA dataset of Streptococcus pneumoniae NADPH oxidase with NADPH under turnover conditions [22290 multi-frame micrographs composed of 1036 frames each in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
9.4 TB | 2.2 Å | |
| 2025-07-10 | Cryo-EM of HCoV-229E 5' proximal stem-loop 5 [multiple data sets in TIFF and MRC formats] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38076883] [DOI: 10.1101/2023.11.22.567964] |
10.9 TB | 6.5 Å | |
| 2025-07-10 | Single particle cryoEM dataset of nucleosomes containing H2AK119ub [12211 multi-frame micrographs composed of 199 frames each in EER format] | Hicks CW, Wolberger C [Pubmed: 39149911] [DOI: 10.1093/nar/gkae698] |
6.6 TB | 3.41 - 3.47 Å | |
| 2025-07-10 | Cryo-electron micrographs of human phosphorylated STAT1-DNA complexes [6993 multi-frame micrographs composed of 54 frames each in TIFF format] | Minami M, Sugiyama A, Hirose M, Sugita Y, Ose T [Pubmed: 40100957] [DOI: 10.1126/scisignal.ads2210] |
1.9 TB | 3.84 Å | |
| 2025-07-10 | Unaligned multi-frame micrographs of DNA polymerase theta helicase domain with AMP-PNP [671 multi-frame micrographs composed of 2130 frames each in EER format] | Ito F, Li Z, Khant HA, Chen XS [Pubmed: 40253368] [DOI: 10.1038/s41467-025-58441-x] |
660.2 GB | 3.5 Å | |
| 2025-07-10 | Electron Cryomicroscopy of alpha-Latrotoxin [87895 micrographs in MRC format] | Klink B, Kalyankumar KS, Gatsogiannis C [Pubmed: 39362850] [DOI: 10.1038/s41467-024-52635-5] |
2.7 TB | 2.7 - 6.7 Å | |
| 2025-07-10 | Motion corrected micrographs [32306 multi-frame micrographs composed of 30 frames each in MRCS format] | Arni Thorlacius AT, Maksim Rulev MR, Oscar Sundberg OS, Anna Sundborger-Lunna ASL [Pubmed: 39910321] [DOI: 10.1038/s42003-025-07610-1] |
5.8 TB | 3.45 - 3.88 Å | |
| 2025-07-10 | Single Particle Analysis of the Retron IA Surveillance Complex [11394 multi-frame micrographs composed of 37 frames each in TIFF format] | Burman N, Thomas George J, Wilkinson R, Wiedenheft B [Pubmed: 40196496] [DOI: 10.1101/2025.03.26.645336] |
3.2 TB | 2.99 - 3.13 Å |