Due to a storage failure, some data files are currently inaccessible (Markted: Incomplete dataset).
We are currently working to restore, but we are accepting priority requests.(email, inquiry).
We are restoring lost files from backups in the following order:
We apologize for the inconvenience and appreciate your understanding.
오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2019-11-11 | Structure of the green algal photosystem I supercomplex with a decameric light-harvesting complex I. [10989 multi-frame micrographs composed of 33 frames each in TIFF format] | Suga M, Ozawa S, Yoshida-Motomura K, Akita F, Miyazaki N, Takahashi Y [Pubmed: 31182847] [DOI: 10.1038/s41477-019-0438-4] |
8.0 TB | 2.8 - 2.9 Å | |
| 2019-11-07 | Cryo-EM structure of calcium-bound TMEM16F in nanodisc with supplement of PIP2 [stack of 3823 particles in MRCS format] | Feng S, Jan LY, Cheng Y [Pubmed: 31291589] [DOI: 10.1016/j.celrep.2019.06.023] |
576.6 GB | 3.2 - 3.3 Å | |
| 2019-11-06 | Cryo-EM dataset, containing multiple conformations of a heterodimeric ABC exporter TmrAB (EQ-mutant), incubated with a mixture of ATP and ADP [multiple data sets in MRC and MRCS formats] | Januliene D, Hofmann S, Mehdipour AR, Thomas C, Hummer G, Tampé R, Moeller A [Pubmed: 31316210] [DOI: 10.1038/s41586-019-1391-0] |
7.1 TB | 2.8 - 2.9 Å | |
| 2019-10-30 | Cryo-EM structure of the translocator of the outer mitochondrial membrane [2057 multi-frame micrographs composed of 49 frames each in TIFF format] | Araiso Y, Tsutsumi A, Qiu J, Imai K, Shiota T, Song J, Lindau C, Wenz LS, Sakaue H, Yunoki K, Kawano S, Suzuki J, Wischnewski M, Schutze C, Ariyama H, Ando T, Becker T, Lithgow T, Wiedemann N, Pfanner N, Kikkawa M, Endo T [Pubmed: 31600774] [DOI: 10.1038/s41586-019-1680-7] |
1.9 TB | 3.81 Å | |
| 2019-10-17 | Cryo electron microscopy of TssA protein from T6SS of Vibrio cholerae. [multiple data sets in MRC and MRCS formats] | Nazarov S, Adaixo R, Basler M [Pubmed: 31403721] [DOI: 10.15252/embj.2018100825] |
1.3 TB | 3.9 Å | |
| 2019-10-14 | PolyA polymerase module of the cleavage and polyadenylation factor (CPF) from Saccharomyces cerevisiae [multiple data sets in MRCS format] | Casanal A, Kumar A, Hill CH, Emsley P, Passmore LA [Pubmed: 29074584] [DOI: 10.1126/science.aao6535] |
15.4 TB | 3.55 Å | |
| 2019-10-09 | Single particle cryo-EM dataset of the triskelion hub subparticle extraction from clathrin cages [multiple data sets in MRCS format] | Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ [Pubmed: 31582853] [DOI: 10.1038/s41594-019-0292-0] |
88.4 GB | 4.69 - 7.79 Å | |
| 2019-10-07 | Cryo-EM structure of the serotonin 5-HT1B receptor coupled to heterotrimeric Go [multiple data sets in TIFF and MRCS formats] | Garcia-Nafria J, Nehme R, Edwards PC, Tate CG [Pubmed: 29925951] [DOI: 10.1038/s41586-018-0241-9] |
8.0 TB | 3.78 Å | |
| 2019-10-07 | Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
898.1 MB | — | |
| 2019-10-07 | Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [4529 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
605.2 GB | — | |
| 2019-10-07 | Raw FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites. [4490 micrographs in TIFF format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/eLife.50598] |
273.8 GB | — | |
| 2019-10-07 | Processed FIB SEM images of a parasitophorous vacuole containing Toxoplasma gondii ∆CAP parasites, complemented with CAP. [1 multi-frame micrographs composed of 1 frames each in MRC format] | Hunt A, Russell MRG, Wagener J, Kent R, Carmeille R, Peddie CJ, Collinson L, Heaslip A, Ward GE, Treeck M [Pubmed: 31577230] [DOI: 10.7554/elife.50598] |
583.8 MB | — | |
| 2019-10-04 | Single particle cryo-EM dataset of clathrin cages with phase flipping suitable for refinement [stack of 12785 particles in MRCS format] | Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ [Pubmed: 31582853] [DOI: 10.1038/s41594-019-0292-0] |
11.9 GB | 9.07 - 23.68 Å | |
| 2019-10-04 | Single particle cryo-EM dataset of clathrin cages suitable for subparticle extraction [multiple data sets in MRCS format] | Morris KL, Jones JR, Halebian M, Wu S, Baker M, Armache JP, Avila Ibarra A, Sessions RB, Cameron AD, Cheng Y, Smith CJ [Pubmed: 31582853] [DOI: 10.1038/s41594-019-0292-0] |
19.9 GB | 9.07 - 23.68 Å | |
| 2019-09-30 | Human pre-B spliceosome and U4/U6.U5 tri-snRNP [multiple data sets in MRC and MRCS formats] | Charenton C, Wilkinson ME, Nagai K [Pubmed: 30975767] [DOI: 10.1126/science.aax3289] |
2.3 TB | 2.9 - 28.0 Å | |
| 2019-09-27 | Cryo-EM structure of TMV in water [62 multi-frame micrographs composed of 20 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
6.8 GB | 1.9 Å | |
| 2019-09-27 | Cryo-EM structure of TMV with Ca2+ at low pH [197 multi-frame micrographs composed of 40 frames each in TIFF format] | Weis F, Beckers M, von der Hocht I, Sachse C [Pubmed: 31535454] [DOI: 10.15252/embr.201948451] |
22.0 GB | 2.0 Å | |
| 2019-08-30 | Cryo-EM structures of human P4-ATPase flippase [multiple data sets in TIFF format] | Hiraizumi M, Yamashita K, Nishizawa T, Nureki O [Pubmed: 31416931] [DOI: 10.1126/science.aay3353] |
11.0 TB | 2.63 - 3.42 Å | |
| 2019-08-28 | Improved applicability and robustness of fast cryo-electron tomography data acquisition [12 tilt series in MRC format] | Eisenstein F, Danev R, Pilhofer M [Pubmed: 31425790] [DOI: 10.1016/j.jsb.2019.08.006] |
21.6 GB | 9.0 Å | |
| 2019-08-27 | Yeast postcatalytic spliceosome, two cryoEM data sets at different magnifications [multiple data sets in MRC format] | Wilkinson ME, Nagai K [Pubmed: 31478901] [DOI: 10.1107/S2059798319010519] |
6.3 TB | 3.3 Å | |
| 2019-08-16 | Cryo electron microscopy of Cannabinoid Receptor 1-G Protein Complex [2756 multi-frame micrographs composed of 40 frames each in TIFF format] | Krishna Kumar K, Shalev-Benami M, Kobilka BK, Skiniotis G [Pubmed: 30639101] [DOI: 10.1016/j.cell.2018.11.040] |
476.0 GB | 3.0 Å | |
| 2019-08-07 | Identification of a druggable VP1-VP3 interprotomer pocket in the capsid of enteroviruses [2120 micrographs in MRC format] | Geraets JA, Flatt JW, Domanska A, Butcher SJ [Pubmed: 31185007] [DOI: 10.1371/journal.pbio.3000281] |
2.2 TB | 4.0 Å | |
| 2019-07-29 | CryoWriter: 3.5 Å structure of human 20S proteasome with bound Fabs from microfluidic protein isolation, and 1.9 Å TMV structure [523 multi-frame micrographs composed of 30 frames each in TIFF format] | Schmidli C, Albiez S, Rima L, Righetto R, Mohammed I, Oliva P, Kovacik L, Stahlberg H, Braun T [Pubmed: 31292253] [DOI: 10.1073/pnas.1907214116] |
136.5 GB | 3.5 Å | |
| 2019-07-29 | Movies of horse spleen apoferritin on multifunctional ultrastable graphene supports for electron cryomicroscopy [480 multi-frame micrographs composed of 38 frames each in MRCS format] | Naydenova K, Peet MJ, Russo CJ [Pubmed: 31127045] [DOI: 10.1073/pnas.1904766116] |
570.0 GB | 2.1 Å | |
| 2019-07-25 | Open state structure of the full-length TRPV2 cation channel with a resolved pore turret domain [2447 multi-frame micrographs composed of 50 frames each in MRCS format] | Dosey TL, Wang Z, Fan G [Pubmed: 30598551] [DOI: 10.1038/s41594-018-0168-8] |
934.8 GB | 3.6 Å |