Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-12-13 |  |
Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [1598 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
31.3 GB | — |
| 2022-12-13 |  |
Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [910 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
13.7 GB | — |
| 2022-12-13 |  |
Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [940 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
12.5 GB | — |
| 2021-11-08 |  |
Frame aligned tilt series of cryo-FIB milled HEK293 cells expressing pathogenic LRRK2(I2020T)mutant [39 tilt series in MRC format] | Watanabe R, Buschauer R, Böhning J, Audagnotto M, Lasker K, Lu TW, Boassa D, Taylor S, Villa E [Pubmed: 32783917] [DOI: 10.1016/j.cell.2020.08.004] |
2.1 GB | — |
| 2014-09-07 |  |
Full virus map of Brome Mosaic Virus (micrographs and particle coordinates) [multiple data sets in TIFF and MRC formats] | Wang Z, Hryc C, Bammes B, Afonine P, Jakana J, Chen DH, Liu XA, Baker M, Kao C, Ludtke S, Schmid M, Adams P, Chiu W [Pubmed: 25185801] [DOI: 10.1038/ncomms5808] |
1.7 TB | 3.8 Å |
| 2014-09-09 |  |
Full virus map of Brome Mosaic Virus (picked particles) [stack of 35142 particles in IMAGIC format] | Wang Z, Hryc C, Bammes B, Afonine P, Jakana J, Chen DH, Liu XA, Baker M, Kao C, Ludtke S, Schmid M, Adams P, Chiu W [Pubmed: 25185801] [DOI: 10.1038/ncomms5808] |
23.1 GB | 3.8 Å |
| 2024-01-15 |  |
Full-length ClpX AAA protein in a complex with ClpP peptidase [multiple data sets in TIFF and MRC formats] | Ghanbarpour A, Cohen SE, Fei X, Davis JH, Sauer RT [Pubmed: 37949857] [DOI: 10.1038/s41467-023-43145-x] |
1.9 TB | 3.12 Å |
| 2024-10-08 |  |
Full-length mouse 5-HT3A receptor in complex with ALB148471, pre-activated and open-like [6312 multi-frame micrographs composed of 55 frames each in TIFF format] | Felt KCF, Chakrapani SC [Pubmed: 38177669] [DOI: 10.1038/s41594-023-01140-2] |
3.9 TB | 2.92 - 3.79 Å |
| 2024-08-28 |  |
Full-length mouse 5-HT3A receptor in complex with SMP100, pre-activated and open-like [multiple data sets in TIFF format] | Felt KCF, Chakrapani SC [Pubmed: 38177669] [DOI: 10.1038/s41594-023-01140-2] |
6.3 TB | 2.7 - 3.79 Å |
| 2024-12-03 |  |
Full-length mouse 5-HT3A receptor in complex with serotonin, pre-activated and open-like [5771 multi-frame micrographs composed of 40 frames each in TIFF format] | Felt KCF, Chakrapani SC [Pubmed: 38177669] [DOI: 10.1038/s41594-023-01140-2] |
2.7 TB | 2.75 Å |
| 2023-02-28 |  |
GAPDH on EG-grid [270 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
47.4 GB | 2.16 Å |
| 2023-05-17 |  |
GPR56 (ADGRG1) 7TM domain bound to tethered agonist in complex with G protein heterotrimer [6773 multi-frame micrographs composed of 57 frames each in TIFF format] | Barros-Alvarez X, Panova O, Skiniotis G [Pubmed: 35418682] [DOI: 10.1038/s41586-022-04575-7] |
3.6 TB | 2.7 Å |
| 2024-11-19 |  |
Gallus gallus (chicken) calcium homeostasis modulator 1 (CALHM1) channel [5544 multi-frame micrographs composed of 30 frames each in TIFF format] | Syrjanen JL, Furukawa H [Pubmed: 37380652] [DOI: 10.1038/s41467-023-39388-3] |
1.0 TB | 3.36 Å |
| 2022-09-07 |  |
Gea2-Arf1 complex [2798 multi-frame micrographs composed of 100 frames each in TIFF format] | Muccini AJ, Fromme JC [Pubmed: 36044848] [DOI: 10.1016/j.celrep.2022.111282] |
2.3 TB | 3.8 - 4.2 Å |
| 2024-12-09 |  |
Gelsolin-severed and capped F-actin raw data from 'Mechanism of actin filament severing and capping by gelsolin' [multiple data sets in TIFF format] | Barrie KR, Rebowski G, Dominguez R [Pubmed: 39448849] [DOI: 10.1038/s41594-024-01412-5] |
13.3 TB | 2.53 - 3.63 Å |
| 2021-03-19 |  |
GluK2/K5 apo [970 multi-frame micrographs composed of 40 frames each in TIFF format] | Khanra N, Meyerson J [Pubmed: 33724189] [DOI: 10.7554/eLife.66097] |
230.4 GB | 7.5 Å |
| 2021-03-26 |  |
GluK2/K5 with 6-Cyano-7-nitroquinoxaline-2,3-dione (CNQX) [multiple data sets in TIFF and MRCS formats] | Khanra NK, Meyerson JRM [Pubmed: 33724189] [DOI: 10.7554/eLife.66097] |
5.9 TB | 5.3 Å |
| 2021-03-26 |  |
GluK2/K5 with L-Glu [multiple data sets in TIFF and MRCS formats] | Khanra NK, Meyerson JRM [Pubmed: 33724189] [DOI: 10.7554/eLife.66097] |
3.4 TB | 5.8 Å |
| 2022-11-14 |  |
Glycine and glutamate bound GluN1a-GluN2B NMDA receptors in non-active 1 conformation at 2.97 Angstrom resolution [7942 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou THC, Furukawa FH [Pubmed: 35637422] [DOI: 10.1038/s41594-022-00772-0] |
1.4 TB | 2.97 Å |
| 2023-02-27 |  |
Gordonia phage Cozz [2799 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
759.4 GB | 2.6 Å |
| 2023-03-02 |  |
Gordonia phage Ziko [5058 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM [Pubmed: 36649709] [DOI: 10.1016/j.str.2022.12.012] |
1.4 TB | 2.6 Å |
| 2024-02-26 |  |
Graphene-sandwiched 20S proteasome [50 multi-frame micrographs composed of 32 frames each in MRCS format] | Liu N, Xu J, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
28.9 GB | 2.6 Å |
| 2024-02-19 |  |
Graphene-sandwiched apoferritin [55 multi-frame micrographs composed of 32 frames each in TIFF format] | Liu N, Xu J, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
20.2 GB | 3.1 Å |
| 2024-06-12 |  |
Graphene-sandwiched spike [2200 multi-frame micrographs composed of 32 frames each in TIFF format] | Xu J, Gao X, Zheng L, Jia X, Xu K, Ma Y, Wei X, Liu N, Peng H, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
1.5 TB | 2.5 Å |
| 2023-02-28 |  |
GroEL on EG-grid [531 multi-frame micrographs composed of 40 frames each in TIFF format] | Fujita J, Makino F, Asahara H, Moriguchi M, Kumano S, Anzai I, Kishikawa J, Matsuura Y, Kato T, Namba K, Inoue T [Pubmed: 36755111] [DOI: 10.1038/s41598-023-29396-0] |
95.2 GB | 1.99 Å |
