EMPIAR-10011 - Full virus map of Brome Mosaic Virus (picked particles) [stack of 35142 particles in IMAGIC format]

EMPIAR-10011

Full virus map of Brome Mosaic Virus (picked particles) [stack of 35142 particles in IMAGIC format]

Publication:

An atomic model of brome mosaic virus using direct electron detection and real-space optimization

Wang Z, Hryc CF, Bammes B, Afonine PV, Jakana J, Chen DH, Liu X, Baker ML, Kao C, Ludtke SJ, Schmid MF, Adams PD, Chiu W

Nat Commun 5 (2014) 4808-4808

PMID: 25185801

DOI: doi:10.1038/ncomms5808

Related EMDB entry:

EMD-6000

Deposited:

2014-09-08

Released:

2014-09-09

Last modified:

2014-09-09

Imageset size:

23.13 GB

Imageset DOI:

10.6019/EMPIAR-10011

Experimental metadata:

Download xml json

Version history:

2015-10-27

REL

Restructured the entry directory to have "data" and ".private".

Contains:

picked particles - single frame - processed

Image Sets

1. Brome Mosaic Virus boxed particles

Category:

picked particles - single frame - processed

Image format:

IMAGIC

No. of images or tilt series:

35142

Image size:

(420, 420)

Pixel type:

32 BIT FLOAT

Pixel spacing:

(0.99, 0.99)

Details:

Each particle is a frame averaged image. Data-set is related to micrographs in EMPIAR-10010.

Files:

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Browse All Files

Files:

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

Download a list of selected files.

It is possible to download files by specifying the file list with rsync command, etc.

rsync -av --files-from=(path-to-filelist) rsync://empiar.pdbj.org/empiar/archive (path-to-destination)

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Citations

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Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS. (2023)

The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection.

Rigden DJ, Fernández XM. (2023)

EMPIAR: the Electron Microscopy Public Image Archive.

Iudin A, Korir PK, Somasundharam S, Weyand S, Cattavitello C, Fonseca N, Salih O, Kleywegt GJ, Patwardhan A. (2023)

CLEMSite, a software for automated phenotypic screens using light microscopy and FIB-SEM.

Serra Lleti JM, Steyer AM, Schieber NL, Neumann B, Tischer C, Hilsenstein V, Holtstrom M, Unrau D, Kirmse R, Lucocq JM, Pepperkok R, Schwab Y. (2023)

Structure of a RecT/Redβ family recombinase in complex with a duplex intermediate of DNA annealing.

Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE. (2022)

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