Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2021-09-22 |  |
Oligo nucleosome fraction from metaphase chromosome in Xenopus egg extract lot2 [1456 multi-frame micrographs composed of 50 frames each in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
696.5 GB | 3.77 - 4.32 Å |
| 2022-09-06 |  |
Oligomeric interactions maintain active-site structure in a non-cooperative enzyme family [3854 multi-frame micrographs composed of 50 frames each in TIFF format] | Li YH, Zhang RZ, Chi W, Forouhar F, Clarke OB, Vorobiev S, Singh S, Montelione GT, Szyperski T, Xu Y, Hunt JF [Pubmed: 35801308] [DOI: 10.15252/embj.2021108368] |
902.0 GB | 3.13 - 4.28 Å |
| 2021-09-22 |  |
Open linker DNA nucleosome reconstituted with GUB DNA [1576 multi-frame micrographs composed of 50 frames each in TIFF format] | Arimura YA, Funabiki HF [Pubmed: 34478647] [DOI: 10.1016/j.molcel.2021.08.010] |
777.0 GB | 4.52 Å |
| 2019-07-25 |  |
Open state structure of the full-length TRPV2 cation channel with a resolved pore turret domain [2447 multi-frame micrographs composed of 50 frames each in MRCS format] | Dosey TL, Wang Z, Fan G [Pubmed: 30598551] [DOI: 10.1038/s41594-018-0168-8] |
934.8 GB | 3.6 Å |
| 2023-12-12 |  |
Optimizing Cryo-FIB Lamellas for sub-5Å in situ Structural Biology [multiple data sets in MRC format] | Khavnekar S, Vrbovská V, Zaoralová M, Kelley R, Beck F, Kotecha A, Plitzko JM, Erdmann PS [DOI: 10.1101/2022.06.16.496417] |
1.5 TB | 4.6 Å |
| 2023-01-18 |  |
Organizing Structural Principles of the Interleukin-17 Ligand-Receptor Axis [multiple data sets in TIFF format] | Caveney NA, Wilson SC, Garcia KC [Pubmed: 35863378] [DOI: 10.1038/s41586-022-05116-y] |
17.7 TB | 2.5 - 4.4 Å |
| 2022-03-29 |  |
Oxytocin receptor (OTR) bound to oxytocin in complex with a heterotrimeric Gq protein [7728 multi-frame micrographs composed of 50 frames each in TIFF format] | Meyerowitz JG, Robertson MJ, Panova O, Skiniotis G [Pubmed: 35241813] [DOI: 10.1038/s41594-022-00728-4] |
4.1 TB | 2.9 Å |
| 2023-05-23 |  |
PIC-Mediator in complex with +1 nucleosome (T40N) [20082 micrographs in MRC format] | Chen X, Wang X, Liu W, Ren Y, Qu X, Li J, Yin X, Xu Y [Pubmed: 36201575] [DOI: 10.1126/science.abn8131] |
1.7 TB | 5.04 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S - RyR2-R2474S [10671 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.3 TB | 2.58 - 3.29 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S in the presence of Rycal ARM210 - RyR2-R2474S + ARM210 [11749 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.4 TB | 2.99 - 3.29 Å |
| 2023-02-08 |  |
PKA-phosphorylated CPVT variant human ryanodine receptor type 2 R2474S in the presence of calmodulin - RyR2-R2474S + CaM [12685 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.8 TB | 2.93 - 2.97 Å |
| 2023-02-06 |  |
PKA-phosphorylated human ryanodine receptor type 2 RyR2 [14778 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
2.8 TB | 3.11 Å |
| 2023-02-08 |  |
PKA-phosphorylated human ryanodine receptor type 2 in the presence of calmodulin - RyR2 + CaM [13426 multi-frame micrographs composed of 50 frames each in TIFF format] | Miotto MC, Weninger G, Dridi H, Yuan Q, Liu Y, Wronska A, Melville Z, Sittenfeld L, Reiken S, Marks AR [Pubmed: 35857850] [DOI: 10.1126/sciadv.abo1272] |
3.0 TB | 2.68 - 3.69 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 10 [572 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
745.1 GB | 2.7 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 5 [707 multi-frame micrographs composed of 60 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
773.8 GB | 3.2 Å |
| 2021-03-12 |  |
PKM2 in complex with Compound 6 [590 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
768.0 GB | 2.5 Å |
| 2021-03-12 |  |
PKM2 in complex with L-threonine [476 multi-frame micrographs composed of 75 frames each in TIFF format] | Saur M, Hartshorn MJ, Dong J, Reeks J, Bunkoczi G, Jhoti H, Williams PA [Pubmed: 31877353] [DOI: 10.1016/j.drudis.2019.12.006] |
620.8 GB | 2.6 Å |
| 2022-07-27 |  |
PMCA-amplified α-synuclein fibrils, Multiple System Atrophy patient-derived seeds [4474 micrographs in MRC format] | Frieg B, Geraets JA, Schröder GF | 392.8 GB | 3.02 Å |
| 2022-07-27 |  |
PMCA-amplified α-synuclein fibrils, Parkinson's Disease patient-derived seeds [6780 micrographs in MRC format] | Frieg B, Geraets JA, Schröder GF | 595.3 GB | 3.3 Å |
| 2023-01-31 |  |
PYD-106 bound human GluN1a-GluN2C NMDA receptor in the presence of D-cycloserine and glutamate [11714 multi-frame micrographs composed of 30 frames each in TIFF format] | Chou TH [Pubmed: 36309015] [DOI: 10.1016/j.molcel.2022.10.008] |
2.1 TB | 3.72 - 4.19 Å |
| 2018-10-05 |  |
Paired C2S2M PSII-LHCII supercomplexes from thylakoid membranes of Pisum sativum [6929 micrographs in MRC format] | Melero R [Pubmed: 28855679] [DOI: 10.1038/s41598-017-10700-8] |
433.1 GB | 14.0 Å |
| 2022-11-29 |  |
Parallel cryo electron tomography (PACE-tomo) of 70S ribosomes (121 tilt series) [multiple data sets in TIFF and MRC formats] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
490.1 GB | 3.1 Å |
| 2022-05-20 |  |
Parallel cryo electron tomography (PACE-tomo) of 70S ribosomes (200 kV, side-entry holder) [multiple data sets in MRC format] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
222.8 GB | 5.8 - 6.5 Å |
| 2022-04-26 |  |
Parallel cryo electron tomography (PACE-tomo) of 70S ribosomes [multiple data sets in TIFF and MRC formats] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
282.6 GB | 3.1 Å |
| 2022-06-14 |  |
Parallel cryo electron tomography (PACE-tomo) of 80S ribosomes in situ [multiple data sets in MRC format] | Eisenstein F, Danev R [Pubmed: 36456783] [DOI: 10.1038/s41592-022-01690-1] |
132.3 GB | 8.2 Å |
