Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2022-09-23 |  |
Single particle reconstruction of the MAPK p38alpha in complex with its activating MAP2K MKK6 [multiple data sets in TIFF format] | Bowler MW, Juyoux P, Pellegrini E [Pubmed: 37708276] [DOI: 10.1126/science.add7859] |
4.0 TB | 4.0 Å |
| 2022-09-26 |  |
In situ cryo-electron tomography of autophagic structures in S. cerevisiae [84 tilt series in MRC format] | Bieber A, Capitanio C, Erdmann PS, Schulman BA, Baumeister W, Wilfling F [Pubmed: 36122245] [DOI: 10.1073/pnas.2209823119] |
249.0 GB | — |
| 2022-09-27 |  |
Cryo-EM structure of cyanobacterial PSI in presence of Gallium-substituted ferredoxin (GaFd) [3018 multi-frame micrographs composed of 48 frames each in TIFF format] | Li J, Hamaoka N, Makino F, Kawamoto A, Lin Y, Rögner M, Nowaczyk MM, Lee YH, Namba K, Gerle C, Kurisu G [Pubmed: 36097054] [DOI: 10.1038/s42003-022-03926-4] |
598.2 GB | 1.97 Å |
| 2022-10-04 |  |
Particle stack from TRPM8 bound to calcium dataset [multiple data sets in MRC format] | Diver MM, Cheng Y, Julius D [Pubmed: 31488702] [DOI: 10.1126/science.aax6672] |
129.7 GB | 3.2 Å |
| 2022-10-07 |  |
Tilt series of SARS-CoV-2 spike-bearing virus-like particles (VLPs) interacting with hACE2-bearing extracellular vesicles (tEVs), showing various intermediate states of the SARS-CoV-2 spike protein [6 tilt series in MRC format] | Marcink TC, Porotto M, des Georges A, Moscona A [Pubmed: 35984891] [DOI: 10.1126/sciadv.abo3153] |
9.6 GB | — |
| 2022-10-07 |  |
SARS-CoV-2 S Omicron Spike B.1.1.529 [multiple data sets in MRC and EER formats] | Ni D, Lau K, Turelli P, Beckert B, Nazarov S, Pojer F, Myasnikov A, Stahlberg H, Trono D [DOI: 10.1101/2021.12.27.474250] |
8.2 TB | 3.02 Å |
| 2022-10-07 |  |
Endogenous ligand recognition and structural transition of a human PTH receptor. [multiple data sets in TIFF format] | Kobayashi K, Kawakami K, Kusakizako T, Miyauchi H, Tomita A, Kobayashi K, Shihoya W, Yamashita K, Nishizawa T, Kato HE, Inoue A, Nureki O [Pubmed: 35932760] [DOI: 10.1016/j.molcel.2022.07.003] |
3.8 TB | 2.8 - 4.1 Å |
| 2022-10-10 |  |
Cryo-EM structure of Na+-pumping NADH-ubiquinone oxidoreductase from Vibrio cholerae without inhibitors [9027 multi-frame micrographs composed of 59 frames each in TIFF format] | Kishikawa J, Ishikawa M, Masuya T, Murai M, Kitazumi Y, Butler NL, Kato T, Barquera B, Miyoshi H [Pubmed: 35882843] [DOI: 10.1038/s41467-022-31718-1] |
2.5 TB | 3.1 Å |
| 2022-10-10 |  |
Cryo-EM reveals the structural basis of long-range electron transport in a cytochrome-based bacterial nanowire [965 multi-frame micrographs composed of 45 frames each in TIFF format] | Strauss M [Pubmed: 31240257] [DOI: 10.1038/s42003-019-0448-9] |
256.6 GB | 3.4 Å |
| 2022-10-14 |  |
The structure of hemolysin A secretion system, wild-type HlyB/D complex without nucleotide. [multiple data sets in TIFF and MRC formats] | Zhao H, Chen J [Pubmed: 36055198] [DOI: 10.1016/j.cell.2022.07.017] |
3.5 TB | 2.9 Å |
| 2022-10-14 |  |
The structure of hemolysin A secretion system, HlyB(E631Q)/D complex with ATPMg. [12543 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhao H, Chen J [Pubmed: 36055198] [DOI: 10.1016/j.cell.2022.07.017] |
5.4 TB | 3.4 Å |
| 2022-10-17 |  |
Cryo-EM structure of non gastric H,K-ATPase alpha2 mutants [multiple data sets in TIFF format] | Abe K, Nakanishi H [Pubmed: 36085139] [DOI: 10.1038/s41467-022-32793-0] |
3.8 TB | 2.8 - 3.4 Å |
| 2022-10-17 |  |
Cryo-electron tomography of microtubules assembled from purified porcine brain tubulin in the presence of GTP [4 reconstructed volumes in MRC format] | Guyomar C, Bousquet C, Ku S, Heumann J, Guilloux G, Gaillard N, Heichette C, Duchesne L, Steinmetz MO, Gibeaux R, Chrétien D [Pubmed: 36503602] [DOI: 10.7554/eLife.83021] |
8.4 GB | 25.0 Å |
| 2022-10-28 |  |
Chlamydomonas Cryo-Slice and View on Thermo Scientific Helios 5 Hydra PFIB [477 micrographs in TIFF format] | Kelley R, Khavnekar S, Wietrzynski W, Plitzko J, Kotecha A | 4.4 GB | — |
| 2022-10-31 |  |
Cryo-EM reconstruction of P.falciparum kinesin-8B motor domain in no nucleotide state bound to tubulin dimer [4075 micrographs in MRC format] | Liu T, Shilliday F, Cook AD, Moores CA [Pubmed: 36384964] [DOI: 10.1038/s41467-022-34710-x] |
216.2 GB | 3.3 - 4.3 Å |
| 2022-10-31 |  |
Cryo-EM dataset of P.berghei kinesin-8B motor domains in no nucleotide state bound to tubulin dimer [multiple data sets in MRC format] | Liu T, Shilliday F, Cook AD, Moores CA [Pubmed: 36384964] [DOI: 10.1038/s41467-022-34710-x] |
890.0 GB | 4.3 Å |
| 2022-10-31 |  |
cryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22 [3801 micrographs in MRC format] | Liu Y, Cao C, Huang XP, Gumpper RH, Rachman MM, Shih SL, Krumm BE, Zhang S, Shoichet BK, Fay JF, Roth BL [Pubmed: 36302898] [DOI: 10.1038/s41589-022-01173-6] |
333.7 GB | 2.87 Å |
| 2022-10-31 |  |
cryoEM structure of Gq-coupled MRGPRX1 with peptide agonist BAM8-22 & ML382 [2495 micrographs in MRC format] | Liu Y, Cao C, Huang XP, Gumpper RH, Rachman MM, Shih SL, Krumm BE, Zhang S, Shoichet BK, Fay JF, Roth BL [Pubmed: 36302898] [DOI: 10.1038/s41589-022-01173-6] |
219.1 GB | 2.87 Å |
| 2022-10-31 |  |
cryoEM structure of Gq-coupled MRGPRX1 with Compound-16 [3281 micrographs in MRC format] | Liu Y, Cao C, Huang XP, Gumpper RH, Rachman MM, Shih SL, Krumm BE, Zhang S, Shoichet BK, Fay JF, Roth BL [Pubmed: 36302898] [DOI: 10.1038/s41589-022-01173-6] |
288.1 GB | 2.71 - 3.25 Å |
| 2022-11-01 |  |
CryoEM single particle dataset of delta-latroinsectotoxin dimer [2338 multi-frame micrographs composed of 60 frames each in TIFF format] | Gatsogiannis C, Chen M [Pubmed: 34845192] [DOI: 10.1038/s41467-021-26562-8] |
1.4 TB | 4.63 Å |
| 2022-11-01 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer [790 multi-frame micrographs composed of 75 frames each in TIFF format] | Laverty D, Masiulis S, Aricescu AR [Pubmed: 30602789] [DOI: 10.1038/s41586-018-0833-4] |
1007.4 GB | 3.2 Å |
| 2022-11-01 |  |
Cryo-EM movies of the human α1β3γ2 GABAA receptor in a lipid bilayer bound to picrotoxin [803 multi-frame micrographs composed of 75 frames each in TIFF format] | Masiulis S, Desai R, Uchanski T, Serna Martin I, Laverty D, Karia D, Malinauskas T, Zivanov J, Pardon E, Kotecha A, Steyaert J, Miller KW, Aricescu AR [Pubmed: 30602790] [DOI: 10.1038/s41586-018-0832-5] |
1.0 TB | 3.1 Å |
| 2022-11-04 |  |
Tilt series of mouse heavy chain apoferritin acquired on Krios G4 equipped with SelectrisX and Falcon4i [3300 multi-frame micrographs composed of 153 frames each in EER format] | Obr M, Yang W, Karia D, Koh FA, Kotecha A | 131.0 GB | — |
| 2022-11-07 |  |
Topological Crossing in the Misfolded Tetrahymena Ribozyme Resolved by Cryo-EM [42382 micrographs in MRC format] | Li S, Palo M, Pintilie GD, Zhang X, Su Z, Kappel K, Chiu W, Zhang K, Das R [Pubmed: 36067294] [DOI: 10.1073/pnas.2209146119] |
3.6 TB | 3.01 - 4.01 Å |
| 2022-11-11 |  |
Tilt series of SARS-CoV-2 virions, Wuhan/Alpha/Beta/Delta variants [multiple data sets in MRC format] | Calder LJ, Calcraft T, Hussain S, Harvey R, Rosenthal PB [Pubmed: 36357779] [DOI: 10.1038/s42003-022-04183-1] |
120.5 GB | 27.75 - 44.4 Å |
