Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2023-04-11 |  |
Sarecycline inhibits protein translation in Cutibacterium acnes 70S ribosome using a two-site mechanism [multiple data sets in TIFF and MRC formats] | Lomakin IB, Devarkar SC, Patel S, Grada A, Bunick CG [Pubmed: 36864821] [DOI: 10.1093/nar/gkad103] |
6.2 TB | 2.78 Å |
| 2021-03-24 |  |
Jack bean urease imaged at 49kX nominal magnification [239 multi-frame micrographs composed of 30 frames each in TIFF format] | Feathers JR, Spoth KA, Fromme JC [Pubmed: 33817625] [DOI: 10.1016/j.yjsbx.2021.100047] |
169.3 GB | 2.77 Å |
| 2022-12-13 |  |
Single particle cryo-EM dataset of the Vairimorpha necatrix 20S proteasome from spores [7240 multi-frame micrographs composed of 30 frames each in TIFF format] | Jespersen N, Ehrenbolger K, Winiger RR, Svedberg D, Vossbrinck CR, Barandun J [Pubmed: 36379934] [DOI: 10.1038/s41467-022-34691-x] |
814.1 GB | 2.77 Å |
| 2022-06-07 |  |
Cryo-EM structure of the gastric proton pump complexed with revaprazan [multiple data sets in TIFF format] | Abe K, Tanaka S, Morita M, Yamagishi T [Pubmed: 35604136] [DOI: 10.1021/acs.jmedchem.2c00338] |
2.1 TB | 2.76 Å |
| 2020-12-02 |  |
Single-particle cryo-EM micrographs of a chromatosome containing human linker histone H1.4 [1183 multi-frame micrographs composed of 76 frames each in TIFF format] | Zhou BR [Pubmed: 33238161] [DOI: 10.1016/j.molcel.2020.10.038] |
208.9 GB | 2.76 Å |
| 2023-03-01 |  |
CryoEM structure of Go-coupled 5-HT5AR in complex with Methylergometrine [10530 micrographs in MRC format] | Fay JF, Roth BL, Zhang S [Pubmed: 35835867] [DOI: 10.1038/s41594-022-00796-6] |
924.6 GB | 2.75 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compounds 47 and VS1 [186 multi-frame micrographs composed of 103 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
127.5 GB | 2.75 Å |
| 2022-11-15 |  |
cryoEM movies from 30S-RbfA complex [3369 multi-frame micrographs composed of 20 frames each in MRC format] | Schedlbauer A, Fucini P, Connell SR [Pubmed: 34088665] [DOI: 10.1126/sciadv.abf7547] |
3.5 TB | 2.75 - 2.96 Å |
| 2021-12-17 |  |
cryoEM of Mycobacterium tuberculosis WT RNAP holoenzyme bound to the Mtb WhiB7 promoter [5080 multi-frame micrographs composed of 50 frames each in TIFF format] | Lilic M, Darst SA, Campbell EA [Pubmed: 34171296] [DOI: 10.1016/j.molcel.2021.05.017] |
1.2 TB | 2.74 Å |
| 2023-01-30 |  |
ChRmine in MSP1E3D1 lipid nanodisc [10903 multi-frame micrographs composed of 50 frames each in TIFF format] | Tucker K, Sridharan S, Adesnik H, Brohawn SG [Pubmed: 35977941] [DOI: 10.1038/s41467-022-32441-7] |
7.0 TB | 2.74 Å |
| 2022-04-25 |  |
Cryo electron microscopy of in vitro recombinant SAA1.1 amyloid fibrils [multiple data sets in TIFF and JPEG formats] | Schmidt MS [Pubmed: 33579941] [DOI: 10.1038/s41467-021-21129-z] |
525.4 GB | 2.73 - 2.95 Å |
| 2022-07-27 |  |
cryoEM structure of Go-coupled 5-HT5A with agonist 5-CT [4006 micrographs in MRC format] | Fay JF, Roth BL, Zhang S [Pubmed: 35835867] [DOI: 10.1038/s41594-022-00796-6] |
351.8 GB | 2.73 Å |
| 2022-09-09 |  |
Cryo-EM structure of GH31 alpha-1,3-glucosidase from Lactococcus lactis subsp. cremoris [995 multi-frame micrographs composed of 50 frames each in TIFF format] | Ikegaya M, Moriya T, Adachi N, Kawasaki M, Park EY, Miyazaki T [Pubmed: 35293315] [DOI: 10.1016/j.jbc.2022.101827] |
911.2 GB | 2.73 Å |
| 2022-02-04 |  |
Nudaurelia capensis omega virus capsid: virus-like particles expressed in Nicotiana benthamiana [multiple data sets in MRC format] | Castells-Graells R, Ribeiro JRS, Domitrovic T, Hesketh EL, Scarff CA, Johnson JE, Ranson NA, Lawson DM, Lomonossoff GP [Pubmed: 34031522] [DOI: 10.1038/s42003-021-02134-w] |
3.4 TB | 2.72 Å |
| 2023-06-05 |  |
Cryo electron microscopy of Mce1 transporter from Mycobacterium smegmatis [multiple data sets in TIFF format] | Chen J, Bhabha G, Ekiert D [Pubmed: 37495693] [DOI: 10.1038/s41586-023-06366-0] |
20.9 TB | 2.71 - 3.19 Å |
| 2022-10-31 |  |
cryoEM structure of Gq-coupled MRGPRX1 with Compound-16 [3281 micrographs in MRC format] | Liu Y, Cao C, Huang XP, Gumpper RH, Rachman MM, Shih SL, Krumm BE, Zhang S, Shoichet BK, Fay JF, Roth BL [Pubmed: 36302898] [DOI: 10.1038/s41589-022-01173-6] |
288.1 GB | 2.71 - 3.25 Å |
| 2022-06-17 |  |
The complex of phosphorylated human cystic fibrosis transmembrane conductance regulator (CFTR) with ATP/Mg and Lumacaftor (VX-809) [7650 multi-frame micrographs composed of 60 frames each in TIFF format] | Fiedorczuk K, Chen J [Pubmed: 34995514] [DOI: 10.1016/j.cell.2021.12.009] |
5.8 TB | 2.7 Å |
| 2021-09-17 |  |
Single particle cryo-EM dataset of sarkosyl-insoluble fraction from the frontal cortex of an individual with progressive supranuclear palsy [6601 multi-frame micrographs composed of 40 frames each in TIFF format] | Shi Y, Zhang W, Yang Y, Murzin AG, Falcon B, Kotecha A, van Beers M, Tarutani A, Kametani F, Garringer HJ, Vidal R, Hallinan GI, Lashley T, Saito Y, Murayama S, Yoshida M, Tanaka H, Kakita A, Ikeuchi T, Robinson AC, Mann DMA, Kovacs GG, Revesz T, Ghetti B, Hasegawa M, Goedert M, Scheres SHW [Pubmed: 34588692] [DOI: 10.1038/s41586-021-03911-7] |
967.4 GB | 2.7 Å |
| 2022-06-22 |  |
Cryo electron microscopy of inactive hyaluronan synthase with UDP-GlcNAc [9026 multi-frame micrographs composed of 40 frames each in TIFF format] | Maloney FP, Kuklewicz J, Zimmer J [Pubmed: 35355017] [DOI: 10.1038/s41586-022-04534-2] |
2.3 TB | 2.7 - 3.1 Å |
| 2020-10-16 |  |
E. coli 50S ribosome bound to compounds 46 and VS1 [1095 multi-frame micrographs composed of 53 frames each in TIFF format] | Pellegrino J, Lee DJ, Fraser JS, Seiple IB [Pubmed: 32968273] [DOI: 10.1038/s41586-020-2761-3] |
403.8 GB | 2.7 Å |
| 2023-05-17 |  |
Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling - dataset2 [10537 multi-frame micrographs composed of 40 frames each in TIFF format] | Hillen HS [Pubmed: 34135319] [DOI: 10.1038/s41467-021-23702-y] |
2.2 TB | 2.7 - 2.9 Å |
| 2021-10-26 |  |
CryoEM structure of the outer membrane secretin channel pIV from the f1 filamentous bacteriophage [multiple data sets in TIFF format] | Conners R, Gold VAM [Pubmed: 34728631] [DOI: 10.1038/s41467-021-26610-3] |
7.0 TB | 2.7 Å |
| 2022-05-17 |  |
Structures of positive allosteric modulator-bound and unbound active human calcium-sensing receptor [13082 multi-frame micrographs composed of 60 frames each in TIFF format] | Park J, Zuo H, Frangaj A, Fu Z, Yen LY, Zhang Z, Mosyak L, Slavkovich VN, Liu J, Ray KM, Cao B, Vallese F, Geng Y, Chen S, Grassucci R, Dandey VP, Tan YZ, Eng E, Lee Y, Kloss B, Liu Z, Hendrickson WA, Potter CS, Carragher B, Graziano J, Conigrave AD, Frank J, Clarke OB, Fan QR [Pubmed: 34916296] [DOI: 10.1073/pnas.2115849118] |
3.8 TB | 2.7 Å |
| 2022-07-18 |  |
Thylakoid-located voltage-dependent chloride channel VCCN1 [multiple data sets in TIFF format] | Hagino T, Kato T, Kasuya G, Kobayashi K, Kusakizako T, Hamamoto S, Sobajima T, Fujiwara Y, Yamashita K, Kawasaki H, Maturana AD, Nishizawa T, Nureki O [Pubmed: 35523970] [DOI: 10.1038/s41467-022-30292-w] |
2.2 TB | 2.7 - 3.0 Å |
| 2022-07-18 |  |
CryoEM single particle dataset for psNb 2-67 with spike protein [1251 multi-frame micrographs composed of 40 frames each in TIFF format] | Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y [Pubmed: 35738279] [DOI: 10.1016/j.celrep.2022.111004] |
699.6 GB | 2.7 Å |
