The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2021-10-19 | Apoferritin, TMV and T20S proteasome in nanofluidic channels [multiple data sets in TIFF format] | Huber ST, Sarajlic E, Huijink R, Weis F, Evers WH, Jakobi AJ [Pubmed: 35060902] [DOI: 10.7554/eLife.72629] |
308.3 GB | 3.0 - 5.4 Å | |
2020-11-18 | Structure and assembly of ESCRT-III helical Vps24 filaments [1320 micrographs in MRC format] | Huber ST, Mostafavi S, Mortensen SA, Sachse C [Pubmed: 32875105] [DOI: 10.1126/sciadv.aba4897] |
70.0 GB | 3.2 Å | |
2021-08-13 | Human apo ferritin frozen on TEM grid with Amorphous nickel titanium alloy supporting film [426 multi-frame micrographs composed of 32 frames each in TIFF format] | Huang X, Zhang L, Wen Z, Chen H, Li S, Ji G, Yin CC, Sun F [Pubmed: 32758492] [DOI: 10.1016/j.pbiomolbio.2020.07.009] |
134.5 GB | 2.4 Å | |
2021-08-13 | Human apo ferritin frozen on TEM grid with amorphous carbon supporting film [743 multi-frame micrographs composed of 32 frames each in TIFF format] | Huang X, Zhang L, Wen Z, Chen H, Li S, Ji G, Yin CC, Sun F [Pubmed: 32758492] [DOI: 10.1016/j.pbiomolbio.2020.07.009] |
226.5 GB | 2.6 Å | |
2022-12-12 | E.coli RNaseP Holoenzyme with Mg2+ [14025 multi-frame micrographs composed of 40 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
5.6 TB | 3.1 Å | |
2022-12-12 | E.coli RNaseP ES complex with AU_ptRNA substrate in the presence of Ca2+ [13608 multi-frame micrographs composed of 60 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
8.3 TB | 3.2 Å | |
2023-07-03 | CryoEM structure of yeast Arginyltransferase 1 (ATE1) [14306 multi-frame micrographs composed of 50 frames each in TIFF format] | Huang W [Pubmed: 37076488] [DOI: 10.1038/s41467-023-38004-8] |
7.1 TB | 3.1 - 3.6 Å | |
2022-12-12 | E.coli RNaseP ES complex with GG_ptRNA substrate in the presence of Ca2+ [14541 multi-frame micrographs composed of 60 frames each in TIFF format] | Huang W [Pubmed: 36045135] [DOI: 10.1038/s41467-022-32843-7] |
8.9 TB | 3.4 Å | |
2021-11-02 | CryoEM SPA dataset for NB21, SARS-Cov-2 and NB105 trimeric complex [5874 multi-frame micrographs composed of 45 frames each in TIFF format] | Huang W [Pubmed: 34344900] [DOI: 10.1038/s41467-021-24963-3] |
2.8 TB | 3.58 Å | |
2021-11-05 | CryoEM SPA dataset for NB21, SARS-Cov-2 and NB36 trimeric complex [9390 multi-frame micrographs composed of 63 frames each in TIFF format] | Huang W [Pubmed: 34344900] [DOI: 10.1038/s41467-021-24963-3] |
5.0 TB | 3.55 Å | |
2023-04-27 | Lloviu cuevavirus nucleoprotein RNA complex [multiple data sets in TIFF format] | Hu S, Fujita-Fujiharu Y, Sugita Y, Wendt L, Muramoto Y, Nakano M, Hoenen T, Noda T [DOI: 10.1093/pnasnexus/pgad120] |
4.4 TB | 3.0356 Å | |
2024-04-17 | Structure of human constitutive 20S proteasome complexed with the inhibitor TDI-8304 [16113 multi-frame micrographs composed of 50 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
6.5 TB | 2.04 Å | |
2024-04-03 | Structure of the Plasmodium falciparum 20S proteasome beta-6 A117D mutant complexed with inhibitor WLW-vs [24086 multi-frame micrographs composed of 65 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
11.3 TB | 2.58 Å | |
2024-04-09 | Structure of the Plasmodium falciparum 20S proteasome complexed with inhibitor TDI-8304 [29421 multi-frame micrographs composed of 75 frames each in TIFF format] | Hsu HC, Li H [Pubmed: 38097652] [DOI: 10.1038/s41467-023-44077-2] |
16.7 TB | 2.18 Å | |
2017-03-13 | Bacteriophage P22 mature virion capsid protein [stack of 45150 particles in IMAGIC format] | Hryc CF, Chen D-H, Afonine PV, Jakana J, Wang Z, Haase-Pettingell C, Jiang W, Adams PD, King JA, Schmid MF, Chiu W [Pubmed: 28270620] [DOI: 10.1073/pnas.1621152114] |
159.4 GB | 3.3 Å | |
2024-04-12 | Cryo-electron tomography data of Emiliania huxleyi virus 201 for subtomogram averaging [283 tilt series in TIFF format] | Homola M, Büttner CR, Füzik T, Nováček J, Chaillet M, Förster F, Plevka P [DOI: 10.1101/2023.06.30.547180] |
294.8 GB | 13.0 Å | |
2021-04-14 | Human NLRP1-DPP9 complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
2.3 TB | 3.6 Å | |
2021-04-14 | Human NLRP1-DPP9-VbP complex [multiple data sets in TIFF format] | Hollingsworth LR, Sharif H, Wu H [Pubmed: 33731932] [DOI: 10.1038/s41586-021-03350-4] |
1.2 TB | 2.9 Å | |
2023-09-12 | CryoEM structure determination of actin decorated with smooth muscle heavy meromyosin [1507 multi-frame micrographs composed of 23 frames each in MRC format] | Hojjatian AH, Liu JL, Taylor DWT, Daneshparvar ND, Winkler HW, Ye FY, Fagnant PMF, Trybus KMT, Taylor KAT [Pubmed: 37414375] [DOI: 10.1016/j.jsb.2023.107995] |
4.2 TB | 19.0 Å | |
2023-12-18 | cA3-bound TIR-SAVED [3907 multi-frame micrographs composed of 50 frames each in MRC format] | Hogrel G, Guild A, Graham S, Rickman H, Grüschow S, Bertrand Q, Spagnolo L [Pubmed: 35948638] [DOI: 10.1038/s41586-022-05070-9] |
47.7 TB | 3.8 Å | |
2019-11-18 | cryo-ET of cryo-FIB milled yeast cell in which scs2/22 ist2 are deleted [multiple data sets in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
12.8 GB | — | |
2019-11-18 | cryo-ET of cryo-FIB milled yeast cell in which scs2/22 ist2 are deleted with high intracellular calcium [121 tilt series in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
14.3 GB | — | |
2019-11-18 | cryo-ET of cryo-FIB milled yeast cell, in which Tcb3-GFP is overexpressed and scs2/22 ist2 tcb1/2 are deleted [117 tilt series in MRC format] | Hoffmann PC, Bharat TAM, Wozny MR, Boulanger J, Miller EA, Kukulski W [Pubmed: 31743663] [DOI: 10.1016/j.devcel.2019.09.019] |
3.1 GB | — | |
2021-11-01 | electron cryo-tomograms of axons from human cerebral organoids, expressing GFP-ESYT1 [multiple data sets in MRC and TIFF formats] | Hoffmann P, Giandomenico S, Ganeva I, Wozny M, Sutcliffe M, Lancaster M, Kukulski W [Pubmed: 34698018] [DOI: 10.7554/eLife.70269] |
40.9 GB | — | |
2021-11-01 | electron cryo-tomograms of axons from human cerebral organoids, expressing L1CAM-GFP [multiple data sets in MRC and TIFF formats] | Hoffmann P, Giandomenico S, Ganeva I, Wozny M, Sutcliffe M, Lancaster M, Kukulski W [Pubmed: 34698018] [DOI: 10.7554/eLife.70269] |
30.5 GB | — |