Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) bound to ATP and ADP [13928 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 6.5 TB | 3.2 - 3.7 Å |
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein bUL49.5 from bovine herpesvirus [19307 multi-frame micrographs composed of 1098 frames each in TIFF format] | Lee J, Manon V, Chen J | 8.6 TB | 2.44 - 3.1 Å |
| 2025-12-22 |  |
Single particle cryo-EM dataset of plunge-frozen beta-galactosidase [11618 multi-frame micrographs composed of 1206 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 6.6 TB | 1.9 Å |
| 2025-12-22 |  |
Single particle cryo-EM dataset of soft-landed and rehydrated beta-galactosidase [multiple data sets in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Lorenz UJ | 24.1 TB | 2.9 - 3.7 Å |
| 2025-12-22 |  |
Single particle cryo-EM dataset of plunge-frozen GroEL [9759 multi-frame micrographs composed of 1206 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 5.9 TB | 1.9 Å |
| 2025-12-22 |  |
Single particle cryo-EM dataset of soft-landed and rehydrated GroEL [multiple data sets in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 20.7 TB | 3.9 Å |
| 2025-12-22 |  |
Single particle cryoEM dataset of nucleosomes containing H2BK120ub [8392 multi-frame micrographs composed of 199 frames each in MRC format] | Hicks CW [Pubmed: 39149911] [DOI: 10.1093/nar/gkae698] |
4.8 TB | 3.32 - 3.36 Å |
| 2025-12-22 |  |
Single particle cryo-EM dataset of soft-landed beta-galactosidase [945 multi-frame micrographs composed of 936 frames each in EER format] | Barrass SV, Esser TK, Mowry NJ, Eriksson L, Hruby J, Seeley LT, Drabbels M, Baker LA, Rauschenbach S, Lorenz UJ | 494.9 GB | 5.9 Å |
| 2025-12-22 |  |
Transporter associated with antigen processing (TAP) EQ mutant bound to ATP and the viral protein CPXV012 from cowpox virus [24354 multi-frame micrographs composed of 30 frames each in TIFF format] | Lee J, Manon V, Chen J | 12.6 TB | 3.0 Å |
| 2025-12-21 |  |
Cryo electron tomography of PR/8/34 influenza A virus [multiple data sets in TIFF format] | Huang QJ, Schiffer CA, Somasundaran M [DOI: 10.3791/68636] |
33.6 GB | — |
| 2025-12-19 |  |
Leopard-EM: An extensible 2DTM package to accelerate in situ structural biology [multiple data sets in MRC and EER formats] | Giammar MD, Dickerson JL, Hall LN, Lucas BA | 482.7 GB | — |
| 2025-12-19 |  |
Human Connexin 26 dodecamer at 90mmHg PCO2, pH7.4 [multiple data sets in TIFF, MRC and MRCS formats] | Brotherton DH, Savva CG, Ragan TJ, Dale N, Cameron AD [Pubmed: 35276081] [DOI: 10.1016/j.str.2022.02.010] |
5.4 TB | 1.9 Å |
| 2025-12-19 |  |
Cryo-EM structure of the prostaglandin D2 receptor 1 (DP1) complex in inactive and active states [multiple data sets in MRC and TIFF formats] | Davoudinasab B, Raskovalov A, Lee W, Kim D, Kim H, Lam JH, Han GW, Katritch V, Cherezov V [Pubmed: 41062467] [DOI: 10.1038/s41467-025-64002-z] |
6.0 TB | 2.45 - 2.89 Å |
| 2025-12-19 |  |
Motion-corrected micrographs for herpesvirus helicase-primase complex bound to forked DNA with inhibitor Pritelivir [9216 micrographs in MRC format] | Baranovskiy AG, He Q, Suwa Y, Morstadt LM, Babayeva ND, Lim CJ, Tahirov TH [Pubmed: 41202142] [DOI: 10.1126/sciadv.adz1989] |
1.6 TB | 3.14 - 3.42 Å |
| 2025-12-18 |  |
1.8 A structure of SiO2-sealed and revitrified (210 us) mouse heavy chain Apoferritin [8398 multi-frame micrographs composed of 50 frames each in EER format] | Curtis WA, Hruby J, Krüger CR, Barrass SV, Drabbels M, Lorenz UJ [DOI: 10.1101/2025.05.05.652279] |
2.6 TB | 1.8 Å |
| 2025-12-18 |  |
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [33 multi-frame micrographs composed of 576 frames each in EER format] | Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E, Kim J, Roseborough A, Nyman M [Pubmed: 41284882] [DOI: 10.1073/pnas.2524034122] |
41.6 GB | — |
| 2025-12-17 |  |
1.7 A structure of conventional mouse heavy chain Apoferritin [935 multi-frame micrographs composed of 50 frames each in EER format] | Curtis WA, Hruby J, Krüger CR, Barrass SV, Drabbels M, Lorenz UJ [DOI: 10.1101/2025.05.05.652279] |
370.1 GB | 1.7 Å |
| 2025-12-17 |  |
Cryo ET of Native Hippocampal Glutamatergic Synapses Using Dimeric AuNP Labeling [multiple data sets in EER format] | Kim H, Spangler CJ, Matsui A, Elferich J, Gouaux E, Kim J, Roseborough A, Nyman M [Pubmed: 41284882] [DOI: 10.1073/pnas.2524034122] |
18.4 GB | — |
| 2025-12-17 |  |
Electron tomography of mitochondria from adult and aged mice hearts [multiple data sets in TIFF format] | Barrientos G, Molina-Riquelme I, Breitsprecher L, Busch KB, Eisner V [Pubmed: 41468425] [DOI: 10.1073/pnas.2508911123] |
523.1 MB | — |
| 2025-12-17 |  |
Raw data for cryo-tomograms of Agrobacterium phage 7-7-1 and Agrobacterium sp. H13-3 [841 tilt series in MRC format] | Noteborn WEM, Hoeksma T, Rouchen OY, Briegel A [Pubmed: 41353512] [DOI: 10.1038/s42003-025-09319-7] |
194.7 GB | — |
| 2025-12-17 |  |
Mouse RNF213 coupled to a UBE2L3 activity-based probe in presence of ATPγS [11714 micrographs in MRC format] | Clausen T, Ahel J [Pubmed: 40360510] [DOI: 10.1038/s41467-025-59444-4] |
732.2 GB | 3.8 Å |
| 2025-12-17 |  |
Mouse RNF213 double ATPase mutant (Walker B3, Walker B4) in presence of ATP [multiple data sets in TIFF and MRC formats] | Clausen T, Ahel J [Pubmed: 40360510] [DOI: 10.1038/s41467-025-59444-4] |
1.9 TB | 4.5 Å |
| 2025-12-16 |  |
FusA (Pectobacterium atrosepticum ferrodoxin receptor) in the presence of Ra-LPS [7594 multi-frame micrographs composed of 40 frames each in MRC format] | Machin JM, Ranson NA [DOI: 10.1016/j.yjsbx.2025.100141] |
1.1 TB | 2.4 Å |
| 2025-12-16 |  |
Cryo-EM movies of RNA bound human PNPase in pre-catalytic and loading state [4465 multi-frame micrographs composed of 50 frames each in TIFF format] | Unseld O, Das H [DOI: 10.1093/nar/gkaf1296] |
1.7 TB | 2.15 - 2.46 Å |
| 2025-12-16 |  |
Rat GluN1-GluN2B NMDA receptor channel in complex with glutamate [multiple data sets in TIFF format] | Chou THC, Furukawa FH [Pubmed: 39085540] [DOI: 10.1038/s41586-024-07742-0] |
1.2 TB | 3.9 Å |
