EMPIAR-11545 - Cryo electron microscopy of Virus-like Particle based on PVY coat protein [502 multi-frame micrographs composed of 40 frames each in TIFF format]

EMPIAR-11545

Cryo electron microscopy of Virus-like Particle based on PVY coat protein [502 multi-frame micrographs composed of 40 frames each in TIFF format]

Publication:

From structural polymorphism to structural metamorphosis of the coat protein of flexuous filamentous potato virus Y

Kavčič L, Kežar A, Koritnik N, Žnidarič MT, Klobučar T, Vičič Ž, Merzel F, Holden E, Benesch JLP, Podobnik M

Communications chemistry 7 (2024)

PMID: 38233506

DOI: 10.1038/s42004-024-01100-x

Related EMDB entry:

EMD-17048 EMD-17046

Deposited:

2023-02-20

Released:

2024-02-13

Last modified:

2024-02-13

Imageset size:

379.37 GB

Imageset DOI:

10.6019/EMPIAR-11545

Experimental metadata:

Download xml json

Contains:

micrographs - multiframe

Image Sets

1. Unaligned multi-frame micrographs of Virus-like Particles based on PVY coat protein

Category:

micrographs - multiframe

Image format:

TIFF

No. of images or tilt series:

502

Image size:

(4096, 4096)

Pixel type:

SIGNED 16 BIT INTEGER

Pixel spacing:

(0.95, 0.95)

Details:

The movies were imaged (Titan Glacios) at a nominal pixel resolution of 0.976 Å/pixel using a Falcon 3 direct electron detector (Thermo Fisher Scientific) in counting mode. Each movie is collected across 40 frames with a total electron dose of 40 e-/Å2. After pixel size calibration, the calibrated pixel size is 0.950 A.

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This entry cannot be downloaded from PDBj.

Archives and downloads the selected files into an uncompressed zip file.

We recommend using rsync, aspera, globus, etc.

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Citations

Structural basis for HIV-1 antagonism of host APOBEC3G via Cullin E3 ligase.

Ito F, Alvarez-Cabrera AL, Liu S, Yang H, Shiriaeva A, Zhou ZH, Chen XS. (2023)

The 2023 Nucleic Acids Research Database Issue and the online molecular biology database collection.

Rigden DJ, Fernández XM. (2023)

EMPIAR: the Electron Microscopy Public Image Archive.

Iudin A, Korir PK, Somasundharam S, Weyand S, Cattavitello C, Fonseca N, Salih O, Kleywegt GJ, Patwardhan A. (2023)

CLEMSite, a software for automated phenotypic screens using light microscopy and FIB-SEM.

Serra Lleti JM, Steyer AM, Schieber NL, Neumann B, Tischer C, Hilsenstein V, Holtstrom M, Unrau D, Kirmse R, Lucocq JM, Pepperkok R, Schwab Y. (2023)

Structure of a RecT/Redβ family recombinase in complex with a duplex intermediate of DNA annealing.

Caldwell BJ, Norris AS, Karbowski CF, Wiegand AM, Wysocki VH, Bell CE. (2022)

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