Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
The EMPIAR-PDBj team at Osaka University assists Asian EM researchers with the transfer of big EM image data to EMPIAR. Instead of sending the data directly to the EBI (UK) via the internet, hard drives can also be sent to Osaka University by postal mail or via a courier service. As an alternative, internet transfer to our server in Osaka is also available. If you would like to take advantage of our submission services, please contact us first by e-mail before sending the data to us.
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-06-19 |  |
Single-particle cryo-EM unaligned micrographs of antibody T5-1E08 in complex with stabilized H1N1 Influenza Hemagglutinin Trimer (A/Kiev/1/57) [13653 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G [Pubmed: 40112805] [DOI: 10.1016/j.str.2025.02.010] |
3.4 TB | 2.97 Å |
| 2025-06-19 |  |
Mouse TMEM63b in LMNG-CHS micelle [multiple data sets in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 1.2 TB | 3.4 Å |
| 2025-06-19 |  |
Mouse TMEM63b in DDM-CHS micelle with YN9303-24 Fab [10051 multi-frame micrographs composed of 48 frames each in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 2.2 TB | 3.5 Å |
| 2025-06-19 |  |
Mouse TMEM63b in LMNG-CHS micelle with YN9303-24 Fab [multiple data sets in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 4.2 TB | 3.63 Å |
| 2025-06-19 |  |
Mouse TMEM63b in DDM-CHS micelle [multiple data sets in TIFF format] | Miyata Y, Takahashi K, Lee Y, Segawa K, Nishizawa T | 995.7 GB | 6.96 Å |
| 2025-06-19 |  |
Cryo-EM structure of Aquifex aeolicus RseP (wild-type) in complex with 4A9 Fab [11400 multi-frame micrographs composed of 64 frames each in TIFF format] | Asahi K, Hirose M, Aruga R, Kato T, Nogi T [Pubmed: 40009668] [DOI: 10.1126/sciadv.adu0925] |
2.7 TB | 3.95 Å |
| 2025-06-19 |  |
Cryo-EM structure of Aquifex aeolicus RseP (E18Q mutant) in complex with 4A9 Fab [15777 multi-frame micrographs composed of 66 frames each in TIFF format] | Asahi K, Hirose M, Aruga R, Kato T, Nogi T [Pubmed: 40009668] [DOI: 10.1126/sciadv.adu0925] |
3.8 TB | 3.61 Å |
| 2025-06-19 |  |
ATP-Dependent Diazotase, CmaA6 [7963 multi-frame micrographs composed of 158 frames each in EER format] | Kawai S, Karasawa M, Moriwaki Y, Terada T, Katsuyama Y, Ohnishi Y [Pubmed: 40275441] [DOI: 10.1002/anie.202505851] |
6.0 TB | 3.48 Å |
| 2025-06-19 |  |
Cryo-EM structure of F1-like ATPase for the gliding motility of Mycoplasma [7350 multi-frame micrographs composed of 40 frames each in TIFF format] | Toyonaga T, Kawamoto A, Miyata T [Pubmed: 40009674] [DOI: 10.1126/sciadv.adr9319] |
1.6 TB | 3.2 Å |
| 2025-06-19 |  |
Cryo-EM structure of human GLUT9 apo state [multiple data sets in TIFF format] | Matsushita D, Lee Y, Nishizawa T [Pubmed: 40186864] [DOI: 10.1016/j.celrep.2025.115514] |
4.3 TB | 3.06 Å |
| 2025-06-19 |  |
CRISPR-associated transposon post-transposition complex preliminary micrographs [1717 multi-frame micrographs composed of 40 frames each in MRC format] | Tenjo-Castaño F, Sofos N, Stutzke LS, Temperini P, Fuglsang A, Pape T, Mesa P, Montoya G [Pubmed: 38834066] [DOI: 10.1016/j.molcel.2024.05.005] |
1.2 TB | 2.3 Å |
| 2025-06-19 |  |
Cryo-electron microscopy micrographs of Hailong HalA in complex with oligodeoxyadenylate [10951 multi-frame micrographs composed of 55 frames each in TIFF format] | Tan JMJ, Cofsky JC, Kruse AC, Kranzusch PJ [Pubmed: 40306316] [DOI: 10.1038/s41586-025-09058-z] |
1.9 TB | 1.98 Å |
| 2025-06-17 |  |
Micrographs for DDB1-AMBRA1 WD40 complex [6732 micrographs in MRC format] | Su M.-Y. [Pubmed: 37993427] [DOI: 10.1038/s41467-023-43174-6] |
591.1 GB | 3.08 Å |
| 2025-06-15 |  |
Scan 5 part 1 according to material & methods [1229 micrographs in TIFF format] | Heß M [Pubmed: 40390032] [DOI: 10.1186/s12915-025-02242-7] |
10.3 GB | — |
| 2025-06-13 |  |
Single-particle cryo-EM dataset of the glycosyltransferase ArnC from Salmonella enterica in the apo state from Talos Arctica microscope [multiple data sets in TIFF and MRC formats] | Ashraf KU, Punetha A, Kaelber JT, Petrou VI [Pubmed: 39974898] [DOI: 10.1101/2025.01.29.634835] |
1.3 TB | 2.79 Å |
| 2025-06-13 |  |
PSI-LHCI of the red alga Galdieria sulphuraria NIES-3638 [8800 multi-frame micrographs composed of 50 frames each in TIFF format] | Kato K, Nakajima Y, Shen JR, Nagao R [Pubmed: 40378202] [DOI: 10.1126/sciadv.adv7488] |
1.7 TB | 2.19 Å |
| 2025-06-13 |  |
Cryo electron tomography on xenon plasma FIB lamellae of high-pressure frozen E. coli [286 multi-frame micrographs composed of 10 frames each in EER format] | Berger C., Watson H., Naismith J. H., Dumoux M., Grange M. [Pubmed: 40055361] [DOI: 10.1038/s41467-025-57493-3] EMD-50675 EMD-50699 EMD-50700 EMD-50701 EMD-50702 EMD-50703 EMD-50676 EMD-50678 EMD-50679 EMD-50680 EMD-50681 EMD-50682 EMD-50683 EMD-50684 EMD-50685 EMD-50686 EMD-50687 EMD-50688 EMD-50689 EMD-50690 EMD-50691 EMD-50692 EMD-50693 EMD-50694 EMD-50695 EMD-50696 EMD-50697 EMD-50698 EMD-50704 EMD-50705 EMD-50706 |
2.2 TB | 4.0 - 15.8 Å |
| 2025-06-13 |  |
Cryo-EM structure of wheat ribosome reveals unique features of the plant ribosomes [8323 multi-frame micrographs composed of 30 frames each in MRC format] | Mishra RK, Sharma P, Khaja FT, Uday AB, Hussain T [Pubmed: 38458197] [DOI: 10.1016/j.str.2024.02.006] |
4.6 TB | 2.84 Å |
| 2025-06-13 |  |
Multiple steps of dynein activation by Lis1 visualized by cryo-EM [8316 multi-frame micrographs composed of 40 frames each in EER format] | Kendrick AA, Nguyen KHV, Ma W, Karasmanis EP, Amaro RE, Reck-Peterson SL, Leschziner AE [Pubmed: 40410592] [DOI: 10.1038/s41594-025-01558-w] |
7.2 TB | 2.8 - 3.6 Å |
| 2025-06-13 |  |
Cryo-EM structure of human MPC in complex with UK5099 in nanodiscs [12760 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang J, Feng L [Pubmed: 40044865] [DOI: 10.1038/s41586-025-08667-y] |
4.8 TB | 2.73 Å |
| 2025-06-13 |  |
Cryo-EM structure of human MPC in complex with AKOS005153046 [16536 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang J, Feng L [Pubmed: 40044865] [DOI: 10.1038/s41586-025-08667-y] |
6.1 TB | 2.83 Å |
| 2025-06-12 |  |
Cryo electron tomography of PR/8/34 influenza A virus [10 tilt series in TIFF format] | Huang QJ, Song K, Schiffer CA, Somasundaran M [Pubmed: 40244672] [DOI: 10.1073/pnas.2426427122] |
26.5 GB | 8.5 - 10.0 Å |
| 2025-06-12 |  |
Cryo electron tomography of PR/8/34 influenza A virus incubated with LSTc glycan [10 tilt series in TIFF format] | Huang QJ, Song K, Schiffer CA, Somasundaran M [Pubmed: 40244672] [DOI: 10.1073/pnas.2426427122] |
37.8 GB | 8.5 - 10.0 Å |
| 2025-06-12 |  |
Microtubule dynamics are defined by conformations and stability of clustered protofilaments - growing microtubules [multiple data sets in MRC and TIFF formats] | Kalutskii M, Grubmüller H, Volkov VA, Igaev M [Pubmed: 40440074] [DOI: 10.1073/pnas.2424263122] |
152.7 GB | — |
| 2025-06-12 |  |
Cryo-EM structure of human MPC with pyruvate [13019 multi-frame micrographs composed of 40 frames each in TIFF format] | Zhang J, Feng L [Pubmed: 40044865] [DOI: 10.1038/s41586-025-08667-y] |
4.8 TB | 2.78 Å |
