Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
Due to a storage failure, some datasets are currently inaccessible or incomplete (marked as Incomplete dataset).
We are pleased to report that the following entries have been restored:
EMPIAR-10577 (New)We are still accepting requests for datasets you would like us to download first (email, inquiry).
We apologize for the inconvenience and appreciate your understanding.
EMPIAR-PDBj services will be suspended during the following period for a legally required inspection of electrical equipment.
During this period, the website and data downloads from EMPIAR-PDBj will be unavailable.
Please use EMPIAR-EBI instead.
We apologize for any inconvenience.
大阪大学的EMPIAR-PDBj团队为亚洲EM研究人员向EMPIAR传送大型EM图像数据提供服务。 除了通过互联网将数据直接传送到EBI（UK），研究人员还可以通过邮政或快递服务将数据硬盘发送到大阪大学，或者通过互联网传送到设置于大阪大学的服务器，然后由我们代为传送至数据登录网站。 如果您想使用此项服务，请先通过 电子邮件 与我们联系。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2025-04-07 |  |
Single-particle cryo-EM dataset of the glycosyltransferase ArnC from Salmonella enterica in the UDP-bound state from Talos Arctica microscope [multiple data sets in TIFF and MRC formats] | Ashraf KU, Punetha A, Kaelber JT, Petrou VI [Pubmed: 39974898] [DOI: 10.1101/2025.01.29.634835] |
1.9 TB | 2.96 Å |
| 2025-06-02 |  |
Single-particle cryo-EM dataset of the glycosyltransferase ArnC from Salmonella enterica in the apo state from Krios microscope [multiple data sets in TIFF and MRC formats] | Ashraf KU, Punetha A, Kaelber JT, Petrou VI [Pubmed: 39974898] [DOI: 10.1101/2025.01.29.634835] |
5.9 TB | 2.74 Å |
| 2018-01-22 |  |
Human TRPM4 ion channel in a lipid nanodisc in a calcium-free state [stack of 45247 particles in MRCS format] | Autzen HE, Myasnikov AG, Campbell MG, Asarnow D, Julius D, Cheng Y [Pubmed: 29217581] [DOI: 10.1126/science.aar4510] |
162.5 GB | 3.2 Å |
| 2018-01-22 |  |
Human TRPM4 ion channel in a lipid nanodisc in a calcium-bound state [stack of 221100 particles in MRCS format] | Autzen HE, Myasnikov AG, Campbell MG, Asarnow D, Julius D, Cheng Y [Pubmed: 29217581] [DOI: 10.1126/science.aar4510] |
84.4 GB | 3.1 Å |
| 2021-12-14 |  |
Identifying long-range synaptic inputs using genetically encoded labels and volume electron microscopy [6 multi-frame micrographs composed of 1 frames each in TIFF format] | Ayuso-Jimeno IP, Ronchi P, Wang T, Gallori CE, Gross CT [Pubmed: 35715545] [DOI: 10.1038/s41598-022-14309-4] |
68.7 GB | — |
| 2025-08-22 |  |
Structure of the central Staphylococcus aureus AAA+ protease MecA/ClpC/ClpP [multiple data sets in TIFF format] | Azinas S, Wallden K, Katikaridis P, Jenne T, Schahl A, Mogk A, Carroni M [DOI: 10.1101/2025.06.06.658286] |
11.7 TB | 3.0 - 3.5 Å |
| 2023-09-21 |  |
Single-particle cryo-EM dataset of ALC1 bound to an asymmetric, site-specifically PARylated nucleosome [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 38307862] [DOI: 10.1038/s41467-024-45237-8] |
8.3 TB | 3.0 Å |
| 2021-01-29 |  |
Single-particle cryo-EM dataset of the complex between a nucleosome and the regulatory linker of ALC1 [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 33357431] [DOI: 10.1016/j.celrep.2020.108529] |
6.8 TB | 2.5 - 3.0 Å |
| 2023-07-25 |  |
Single-particle cryo-EM dataset of the complex between ALC1 and a PARylated nucleosome [multiple data sets in TIFF and MRCS formats] | Bacic L, Gaullier G, Deindl S [Pubmed: 34486521] [DOI: 10.7554/eLife.71420] |
14.9 TB | 4.8 - 10.0 Å |
| 2013-07-06 |  |
S.cereviseae 80S ribosome direct electron detetector dataset [260 multi-frame micrographs composed of 16 frames each in MRCS format] | Bai XC, Fernandez IS, McMullan G, Scheres SH [Pubmed: 23427024] [DOI: 10.7554/eLife.00461] |
260.0 GB | 4.5 Å |
| 2018-06-20 |  |
An atomic structure of human gamma-secretase [2925 multi-frame micrographs composed of 20 frames each in MRCS format] | Bai XC, Yan C, Yang G, Lu P, Ma D, Sun L, Zhou R, Scheres SHW, Shi Y [Pubmed: 26280335] [DOI: 10.1038/NATURE14892] |
11.7 TB | 3.4 Å |
| 2024-12-01 |  |
cryo-EM structure of a non-neutralizing antibody V5-4 in complex with SARS-CoV-2 spike [5895 micrographs in MRC format] | Bajic G [Pubmed: 39504245] [DOI: 10.1016/j.celrep.2024.114922] |
517.5 GB | 3.6 Å |
| 2023-10-13 |  |
cryo-EM structure of a broadly neutralizing anti-SARS-CoV-2 antibody STI-9167 [20590 micrographs in MRC format] | Bajic G [Pubmed: 38054729] [DOI: 10.1128/mbio.02477-23] |
1.8 TB | 3.16 Å |
| 2026-03-18 |  |
Cryo-EM of Nipah virus F in complex with a bnAb [3383 micrographs in MRC format] | Bajic G | 297.0 GB | 3.03 Å |
| 2026-03-19 |  |
Convergent and clonotype-specific mutations in the light chain drive affinity maturation of a public antibody targeting a cryptic epitope on S2 of sarbecoviruses [8135 multi-frame micrographs composed of 32 frames each in TIFF format] | Bajic GB [Pubmed: 40803328] [DOI: 10.1016/j.celrep.2025.116122] |
1.5 TB | 3.37 Å |
| 2026-03-19 |  |
Dissecting human monoclonal antibody responses from mRNA and protein-based booster vaccinations against XBB1.5 SARS-CoV-2 [6034 micrographs in MRC format] | Bajic GB, Civljak AC [Pubmed: 40456237] [DOI: 10.1016/j.lanmic.2025.101103] |
529.8 GB | 2.37 Å |
| 2026-09-04 |  |
Cryo-EM structure of B/Lee/1940 hemagglutinin trimer in complex with three KL-BHA-3F4 Fab fragments [13508 multi-frame micrographs composed of 36 frames each in TIFF format] | Bajic GB, Civljak AC, Bonnettaz BB | 2.5 TB | 2.4 Å |
| 2026-09-04 |  |
Cryo-EM structure of B/Lee/1940 hemagglutinin trimer in complex with three KL-BHA-4C2 Fab fragments [7412 multi-frame micrographs composed of 35 frames each in TIFF format] | Bajic GB, Civljak AC, Bonnettaz BB | 1.5 TB | 2.61 Å |
| 2026-09-04 |  |
Cryo-EM structure of B/Phuket/3073/2013 hemagglutinin trimer in complex with two KL-BHA-3D7 Fab fragments [9630 micrographs in MRC format] | Bajic GB, Civljak AC, Bonnettaz BB | 2.0 TB | 3.98 Å |
| 2026-03-20 |  |
Dissecting human monoclonal antibody responses from mRNA- and protein-based booster vaccinations against XBB.1.5 SARS-CoV-2 [6112 micrographs in MRC format] | Bajic GB, Jaiswal DJ [Pubmed: 40456237] [DOI: 10.1016/j.lanmic.2025.101103] |
536.7 GB | 2.65 Å |
| 2024-12-21 |  |
Cryo electron micrographs of soluble human AP-3 core [17545 micrographs in MRC format] | Baker RW, Begley M [Pubmed: 38895279] [DOI: 10.1101/2024.06.05.597630] |
1.5 TB | 3.6 Å |
| 2024-12-21 |  |
Cryo electron micrographs of AP-3 core bound to Arf1 and LAMPI on a lipid nanodisc [11601 micrographs in MRC format] | Baker RW, Begley M [Pubmed: 38895279] [DOI: 10.1101/2024.06.05.597630] |
1018.6 GB | 4.2 - 5.6 Å |
| 2023-07-25 |  |
AP2 bound to MSPE3D1 lipid nanodisc with tyrosine cargo peptide [12075 micrographs in MRC format] | Baker RW, Cannon KS, Sarsam R [Pubmed: 37364761] [DOI: 10.1016/j.jsb.2023.107989] |
1.0 TB | 6.8 Å |
| 2023-07-25 |  |
AP2 bound to MSP1 lipid nanodisc with tyrosine cargo peptide [2918 multi-frame micrographs composed of 60 frames each in TIFF format] | Baker RW, Cannon KS, Sarsam RD [Pubmed: 37364761] [DOI: 10.1016/j.jsb.2023.107989] |
1.0 TB | 4.9 Å |
| 2023-07-25 |  |
AP2 bound to MSPE3D1 lipid nanodisc [9550 multi-frame micrographs composed of 60 frames each in TIFF format] | Baker RW, Cannon KS, Sarsam RD [Pubmed: 37364761] [DOI: 10.1016/j.jsb.2023.107989] |
2.7 TB | 5.4 Å |
