Electron Microscopy Public Image Archive
Electron Microscopy Public Image Archive
大阪大学的EMPIAR-PDBj团队为亚洲EM研究人员向EMPIAR传送大型EM图像数据提供服务。 除了通过互联网将数据直接传送到EBI（UK），研究人员还可以通过邮政或快递服务将数据硬盘发送到大阪大学，或者通过互联网传送到设置于大阪大学的服务器，然后由我们代为传送至数据登录网站。 如果您想使用此项服务，请先通过 电子邮件 与我们联系。
| Release date | Imageset | Title | Authors and references | Size | Resolution |
|---|---|---|---|---|---|
| 2024-11-20 |  |
Cryo-EM raw movies of small circular RNAs [3360 multi-frame micrographs composed of 56 frames each in TIFF format] | Kristoffersen EL, McRae EK, Sørensen NR, Holliger P, Andersen ES [DOI: 10.1101/2024.05.14.594117] |
1.3 TB | — |
| 2024-11-20 |  |
Cryo electron tomography of Rhinovirus 2-infected cos-7 cells [1 reconstructed volumes in MRC format] | Ishemgulova A, Mukhamedova L, Trebichalská Z, Füzik T | 4.2 GB | 4.7 - 7.1 Å |
| 2024-11-19 |  |
Gallus gallus (chicken) calcium homeostasis modulator 1 (CALHM1) channel [5544 multi-frame micrographs composed of 30 frames each in TIFF format] | Syrjanen JL, Furukawa H [Pubmed: 37380652] [DOI: 10.1038/s41467-023-39388-3] |
1.0 TB | 3.36 Å |
| 2024-11-19 |  |
Raw data used to generate the structure of WT ACTG2 F-actin [526 multi-frame micrographs composed of 36 frames each in TIFF format] | Ceron RH, Baez-Cruz FA, Palmer NJ, Carman PJ, Boczkowska M, Heuckeroth RO, Ostap EM, Dominguez R, Barrie KR [Pubmed: 38820162] [DOI: 10.1126/sciadv.adn6615] |
243.0 GB | 2.45 Å |
| 2024-11-19 |  |
Raw data used to generate the structure of R257C ACTG2 F-actin [1021 multi-frame micrographs composed of 40 frames each in TIFF format] | Ceron RH, Baez-Cruz FA, Palmer NJ, Carman PJ, Boczkowska M, Heuckeroth RO, Ostap EM, Dominguez R, Barrie KR [Pubmed: 38820162] [DOI: 10.1126/sciadv.adn6615] |
470.9 GB | 2.72 Å |
| 2024-11-19 |  |
Raw data used to generate the structure of R40C ACTG2 F-actin [multiple data sets in TIFF format] | Ceron RH, Baez-Cruz FA, Palmer NJ, Carman PJ, Boczkowska M, Heuckeroth RO, Ostap EM, Dominguez R, Barrie KR [Pubmed: 38820162] [DOI: 10.1126/sciadv.adn6615] |
1.9 TB | 2.54 Å |
| 2024-11-19 |  |
FAST-EM array tomography data of rat pancreas prepared with rOTO protocol and stained with neodymium acetate [4805 micrographs in TIFF format] | Kievits AJ, Duinkerken BHP, Lane R, de Heus C, van Beijeren Bergen en Henegouwen D, Höppener T, Wolters AHG, Liv N, Giepmans BNG, Hoogenboom JP [Pubmed: 39119255] [DOI: 10.1515/mim-2024-0005] |
479.6 GB | — |
| 2024-11-19 |  |
Training Set for CryoVesNet - Cryo-electron tomograms of rat synaptosomes and synaptic vesicle segmentation [multiple data sets in MRC format] | Khosrozadeh A, Seeger R, Witz G, Radecke J, Sørensen JB, Zuber B [Pubmed: 36876590] [DOI: 10.1101/2022.04.10.487799] |
8.9 GB | — |
| 2024-11-19 |  |
Rubisco data taken with laser-off [126 multi-frame micrographs composed of 50 frames each in TIFF format] | Remis JP | 34.0 GB | 3.1 Å |
| 2024-11-19 |  |
Rubisco data taken with laser-on [126 multi-frame micrographs composed of 50 frames each in TIFF format] | Remis JP | 34.6 GB | 3.1 Å |
| 2024-11-19 |  |
Apoferritin data taken with laser-off [108 multi-frame micrographs composed of 150 frames each in TIFF format] | Remis JP | 38.2 GB | 2.6 Å |
| 2024-11-19 |  |
Apoferritin data taken with laser-on [209 multi-frame micrographs composed of 150 frames each in TIFF format] | Remis JP, Remis JP | 52.0 GB | 2.7 Å |
| 2024-11-12 |  |
Cryo-EM structure of T. pseudonana PyShell helical tube [5994 multi-frame micrographs composed of 52 frames each in TIFF format] | Kawamoto A, Tohda R, Gerle C, Kurisu G [Pubmed: 39357521] [DOI: 10.1016/j.cell.2024.09.013] |
1.4 TB | 2.4 Å |
| 2024-11-12 |  |
Low-dose cryo-electron ptychography of Tobacco Mosaic Virus at 6.1 mrad [114 diffraction images in BIG DATA VIEWER HDF5 format] | Küçükoğlu BK, Mohammed IM, Guerrero-Ferreira RCG, Kube MK, Radecke JR, Ribet SR, Varnavides GV, Leidl MLL, Lau KL, Nazarov SN, Myasnikov AM, Sachse CS, Müller-Caspary KMC, Ophus CO, Stahlberg HS [Pubmed: 39277607] [DOI: 10.1038/s41467-024-52403-5] |
128.4 GB | 5.8 - 12.3 Å |
| 2024-11-12 |  |
Cryo electron micrographs of Plastid-encoded RNA polymerase (PEP) from Sinapis alba [21347 multi-frame micrographs composed of 50 frames each in TIFF format] | Webster MW [Pubmed: 38428394] [DOI: 10.1016/j.cell.2024.01.036] |
4.5 TB | 2.3 - 2.9 Å |
| 2024-11-08 |  |
Cryo-electron microscopy of Avidin [14206 multi-frame micrographs composed of 623 frames each in EER format] | Nazarov S, Beckert Dominique B, Myasnikow A | 3.4 TB | 2.08 Å |
| 2024-11-08 |  |
Automethylated PRC2 dimer bound to nucleosome [multiple data sets in MRC format] | Sauer PV, Pavlenko E, Nogales E, Poepsel S, Cookis T [Pubmed: 39303719] [DOI: 10.1016/j.molcel.2024.08.025] |
1.8 TB | 4.0 - 6.2 Å |
| 2024-11-08 |  |
Cryo-EM structure of the gastric proton pump [multiple data sets in TIFF format] | Abe K, Yokoshima S, Yoshimori A [Pubmed: 37726448] [DOI: 10.1038/s42003-023-05334-8] |
7.3 TB | 2.08 - 2.26 Å |
| 2024-11-08 |  |
Cryo-EM SPA datasets of Streptococcus pneumoniae NADPH oxidase F397A mutant with NADPH under turnover conditions [multiple data sets in EER format] | Dubach VRA, San Segundo-Acosta P, Murphy BJ [Pubmed: 39039317] [DOI: 10.1038/s41594-024-01348-w] |
16.6 TB | 2.64 Å |
| 2024-11-06 |  |
Tilt series of Mycoplasma pneumoniae cells treated with chloramphenicol collected on Gatan K3 camera [139 multi-frame micrographs composed of 10 frames each in TIFF format] | Xue L, Spahn CMT, Schacherl M, Mahamid J | 170.5 GB | 3.0 Å |
| 2024-11-06 |  |
Comparative 3D ultrastructure of Plasmodium falciparum gametocytes [multiple data sets in TIFF format] | Evers F, Roverts R, Boshoven C, Lindert MK, Sinden RE, Akiva A, Kooij TWA, Verhoef JMJ, Sommerdijk N [DOI: 10.1101/2023.03.10.531920] |
239.1 GB | — |
| 2024-11-06 |  |
Low-dose cryo-electron ptychography of Phi-92 Bacteriophage at 5.1 mrad [100 diffraction images in BIG DATA VIEWER HDF5 format] | Küçükoğlu BK, Mohammed IM, Guerrero-Ferreira RCG, Kube MK, Radecke JR, Ribet SR, Varnavides GV, Leidl MLL, Lau KL, Nazarov SN, Myasnikov AM, Sachse CS, Müller-Caspary KMC, Ophus CO, Stahlberg HS [Pubmed: 39277607] [DOI: 10.1038/s41467-024-52403-5] |
137.4 GB | 5.8 - 12.3 Å |
| 2024-11-06 |  |
Array Tomography of zebrafish axillary lymphoid organ - an external, experimentally accessible immune organ in the zebrafish [multiple data sets in TIFF format] | Castranova D, Dell CW, Narayan K, Weinstein BM [DOI: 10.1101/2024.07.25.605139] |
11.4 GB | — |
| 2024-11-04 |  |
CryoEM structure of a post-assembly MS-ring reveals plasticity in stoichiometry and conformation [11627 multi-frame micrographs composed of 50 frames each in MRC format] | Singh PK, Iverson TM [Pubmed: 37205674] [DOI: 10.1371/journal.pone.0285343] |
11.7 TB | 2.9 - 4.1 Å |
| 2024-10-25 |  |
Rules of engagement for cohesin and condensin complexes during mitotic chromosome formation [multiple data sets in DM4 format] | Cisneros- Soberanis F, Abad MA, Medina-Pritchard B, Jeyaprakash AA, Gibcus JHG, Dekker J, Paulson JR, Xie L, Prior IA, Beckett AJ, Earnshaw WC, Samejima I, Samejima K, Pucekova N, Minry L, Goloborodko A, Abraham S | 19.0 GB | — |
