오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2024-03-26 | Single particle movie data of NAIP5/Flic complex [36143 multi-frame micrographs composed of 50 frames each in TIFF format] | Paidimuddala B, Cao J, Zhang L [Pubmed: 38055825] [DOI: 10.1126/sciadv.adi8539] |
3.1 TB | 2.93 Å | |
2024-03-25 | Cryo-EM micrographs of Tb ADAT2/3 bound to tRNA [6150 multi-frame micrographs composed of 80 frames each in TIFF format] | Dolce LG, Zimmer AA, Tengo L, Weis F, Rubio MAT, Alfonzo JD, Kowalinski E [Pubmed: 36347890] [DOI: 10.1038/s41467-022-34441-z] |
1.8 TB | 3.6 Å | |
2024-03-25 | Cryo electron microscopy of quinol-dependent Nitric Oxide Reductase (qNOR) from Alcaligenes xylosoxidans [5466 multi-frame micrographs composed of 43 frames each in EER format] | Flynn AJ, Antonyuk SV, Eady RR, Muench SP, Hasnain SS [Pubmed: 37296134] [DOI: 10.1038/s41467-023-39140-x] |
738.4 GB | 2.2 Å | |
2024-03-22 | Structural basis for directional rotation of the Salmonella flagellum [39332 multi-frame micrographs composed of 50 frames each in TIFF format] | Singh PK, Iverson TM | 9.0 TB | 3.4 - 6.7 Å | |
2024-03-22 | Single-particle cryo-EM unaligned micrographs of NTD-directed neutralizing antibody 5-24 in complex with prefusion SARS-CoV-2 spike glycoprotein [9221 multi-frame micrographs composed of 50 frames each in TIFF format] | Cerutti G, Guo Y, Zhou T, Gorman J, Lee M, Rapp M, Reddem ER, Yu J, Bahna F, Bimela J, Huang Y, Katsamba PS, Liu L, Nair MS, Rawi R, Olia AS, Wang P, Zhang B, Chuang GY, Ho DD, Sheng Z, Kwong PD, Shapiro L [Pubmed: 33789084] [DOI: 10.1016/j.chom.2021.03.005] |
2.4 TB | 3.9 Å | |
2024-03-21 | Single particle Cryo EM of the C-terminal half LRRK2 I2020T mutant bound to GZD-824 [8386 multi-frame micrographs composed of 50 frames each in EER format] | Villagran Suarez A, Leschziner A [Pubmed: 38039358] [DOI: 10.1126/sciadv.adk6191] |
7.4 TB | 3.1 Å | |
2024-03-21 | Cryo-EM of human cannabinoid receptor 1 bound to Fenofibrate with MiniGsq and Nb35 complex [multiple data sets in TIFF format] | Tang W, Wang T, Li F, Wang J [Pubmed: 38298116] [DOI: 10.1002/advs.202306311] |
1.1 TB | 2.88 - 3.05 Å | |
2024-03-21 | Taf15 amyloid filaments - Individual 3 [15621 multi-frame micrographs composed of 40 frames each in TIFF format] | Tetter S, Arseni D, Murzin AG, Buhidma Y, Peak-Chew SYPC, Garringer HJ, Newell KL, Vidal R, Apostolova L, Lashley T, Ghetti B, Ryskeldi-Falcon B [Pubmed: 38057661] [DOI: 10.1038/s41586-023-06801-2] |
2.5 TB | 2.63 Å | |
2024-03-20 | Cryo-electron microscopy Structure of the Human Cannabinoid Receptor CB2-Gi Signaling Complex [multiple data sets in TIFF format] | Xing C, Zhuang Y, Xu TH, Feng Z, Zhou XE, Chen M, Wang L, Meng X, Xue Y, Wang J, Liu H, McGuire TF, Zhao G, Melcher K, Zhang C, Xu HE, Xie XQ [Pubmed: 32004460] [DOI: 10.1016/j.cell.2020.01.007] |
2.5 TB | 3.2 Å | |
2024-03-20 | Directed evolution of and structural insights into antibody-mediated disruption of a stable receptor-ligand complex [592 micrographs in MRC format] | Pennington LF, Gasser P, Kleinboelting S, Zhang C, Skiniotis G, Eggel A, Jardetzky TS [Pubmed: 34862384] [DOI: 10.1038/s41467-021-27397-z] |
52.0 GB | 7.29 Å | |
2024-03-20 | Single particle cryo-EM structure of RIG-I in complex with p3SLR14 [3531 multi-frame micrographs composed of 40 frames each in TIFF format] | Wang W, Pyle AM | 1.1 TB | 3.8 Å | |
2024-03-19 | Unveiling the ultrastructural landscape of extracellular matrix via lift-out cryo-FIBSEM and cryo-ET [multiple data sets in TIFF and MRC formats] | Zens B., Fäßler F., Hansen J.M., Hauschild R., Datler J., Hodirnau V.V., Zheden V., Alanko J., Sixt M., Schur F.K.M. [DOI: 10.1083/jcb.202309125] |
183.0 GB | — | |
2024-03-18 | Ex vivo murine AApoAII amyloid fibril [3083 multi-frame micrographs composed of 40 frames each in TIFF format] | Andreotti S, Schmidt M, Fändrich M [Pubmed: 38199491] [DOI: 10.1016/j.jmb.2024.168441] |
510.6 GB | 2.4 - 2.6 Å | |
2024-03-18 | Mycobacterium phage Che8 mutant capsid (gene 110 deletion) [8118 multi-frame micrographs composed of 30 frames each in TIFF format] | Podgorski JM, White SJ | 2.2 TB | 2.39 Å | |
2024-03-18 | Cryo electron tomography image- and volume-series subtomograms of chloramphenicol-treated mycoplasma pneumoniae [multiple data sets in MRCS and MRC formats] | Powell B.M., Davis J.H. [Pubmed: 37398315] [DOI: 10.1101/2023.05.31.542975] |
788.5 GB | 26.0 Å | |
2024-03-18 | Unseeded Aβ(1-40) amyloid fibrils [4628 multi-frame micrographs composed of 918 frames each in EER format] | Pfeiffer PB, Schmidt M, Fändrich M [Pubmed: 38158175] [DOI: 10.1016/j.jmb.2023.168422] |
1.9 TB | 2.59 - 2.73 Å | |
2024-03-18 | Seeded Aβ(1-40) amyloid fibril [3018 multi-frame micrographs composed of 40 frames each in TIFF format] | Pfeiffer PB, Schmidt M, Fändrich M [Pubmed: 38158175] [DOI: 10.1016/j.jmb.2023.168422] |
550.2 GB | 2.97 Å | |
2024-03-18 | SJ25C1 Fab in complex with soluble CD19 [multiple data sets in TIFF format] | Meyerson JR, He C [Pubmed: 36867678] [DOI: 10.1126/sciimmunol.adf1426] |
3.8 TB | 3.4 Å | |
2024-03-18 | Cryo-EM structure of the human GBP1 dimer bound to GDP-AlF3 [5215 multi-frame micrographs composed of 50 frames each in TIFF format] | Kuhm TI, Jakobi AJ | 2.8 TB | 3.7 Å | |
2024-03-18 | Single particle cryo-EM structure of 14-aa-GS-RIG-I in complex with p3SLR30 [5375 multi-frame micrographs composed of 38 frames each in TIFF format] | Wang W, Pyle AM | 2.7 TB | 3.4 Å | |
2024-03-17 | Cryo-EM of HCoV-NL63 5' proximal stem-loop 5 [multiple data sets in MRC format] | Kretsch RC, Xu L, Zheludev IN, Zhou X, Huang R, Nye G, Li S, Zhang K, Chiu W, Das R [Pubmed: 38076883] [DOI: 10.1101/2023.11.22.567964] |
10.2 TB | 8.4 - 9.0 Å | |
2024-03-16 | Single Particle Cryo Electron Microscopy Structure of the Dsl1 Complex bound to the SNAREs Sec20 and Use1 [multiple data sets in MRC format] | DAmico KD [Pubmed: 38196032] [DOI: 10.1038/s41594-023-01164-8] |
9.7 TB | 4.5 Å | |
2024-02-29 | Sulfolobus acidocaldarius s-layer SlaA [multiple data sets in TIFF format] | Gambelli L, McLaren MJ, Sanders K, Gaines M, Clark L, Gold VAM, Kattnig D, Sikora M, Hanus C, Isupov M, Daum B [Pubmed: 38251732] [DOI: 10.7554/eLife.84617] |
4.5 TB | 3.1 - 3.9 Å | |
2024-02-29 | Cryo electron microscopy of assemblies based on truncated PVY coat protein with K176C mutation [9480 multi-frame micrographs composed of 32 frames each in TIFF format] | Kavcic L, Kezar A [Pubmed: 38233506] [DOI: 10.1038/s42004-024-01100-x] |
957.1 GB | 2.99 - 3.16 Å | |
2024-02-29 | cryo-EM structure of nucleotide-free rMRP2 [12785 multi-frame micrographs composed of 50 frames each in TIFF format] | Mazza TM, Roumeliotis TIR, Garitta EG, Drew DD, Rashid STR, Indiveri CI, Linton KJL, Choudhary JSC, Beis KB | 2.0 TB | 3.21 Å |