오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2020-03-23 | Micrographs of DPS collected at 100 keV using a hybrid pixel direct electron detector [739 multi-frame micrographs composed of 32 frames each in MRCS format] | Naydenova K, McMullan G, Peet MJ, Lee Y, Edwards PC, Chen S, Leahy E, Scotcher S, Henderson R, Russo CJ [Pubmed: 31709064] [DOI: 10.1107/S2052252519012612] |
23.3 GB | 3.4 Å | |
2023-01-30 | 3D-surface reconstruction of cellular cryo-soft X-ray microscopy tomograms using semi-supervised deep learning [7 reconstructed volumes in MRC format] | Dyhr MCA, Sadeghi M, Moynova R, Knappe C, Kepsutlu Çakmak B, Werner S, Schneider G, McNally J, Noe F, Ewers H [DOI: 10.1101/2022.05.16.492055] |
23.5 GB | — | |
2021-11-09 | Multi-modal adaptor-clathrin contacts drive coated vesicle assembly [stack of 54488 particles in MRCS format] | Smith SM, Larocque G, Wood KM, Morris KL, Roseman AM, Sessions RB, Royle SJ, Smith CJ [Pubmed: 34487371] [DOI: 10.15252/embj.2021108795] |
25.0 GB | 10.5 Å | |
2021-02-12 | Negative-stained transmission electron microscopy of the nucleosome and deacetylase complex purified from murine erythroleukemia cells. [400 micrographs in MRC format] | Mackay JP, Landsberg MJ, Jackman MJ [Pubmed: 33264611] [DOI: 10.1016/j.celrep.2020.108450] |
25.0 GB | 14.0 Å | |
2022-03-07 | A biological nano-foam: the wall of coniferous bisaccate pollen (data sets) [multiple data sets in TIFF and JPEG formats] | Cojocaru R, Mannix O, Capron M, Miller CG, Jouneau PH, Gallet B, Falconet D, Pacureanu A, Stukins S [Pubmed: 35138906] [DOI: 10.1126/sciadv.abd0892] |
25.2 GB | — | |
2022-01-28 | CryoET of presequence protease single particle [multiple data sets in TIFF and MRC formats] | Liang WG, Wijaya J, Wei H, Noble AJ, Mancl JM, Mo S, Lee D, Lin King JV, Pan M, Liu C, Koehler CM, Zhao M, Potter CS, Carragher B, Li S, Tang WJ [Pubmed: 35383169] [DOI: 10.1038/s41467-022-29322-4] |
25.4 GB | — | |
2021-04-23 | Cryo-electron tomography of HIV-1 GagdeltaMASP1T8I assemblies [5 tilt series in MRC format] | Ni T, Frosio T, Mendonça L, Sheng Y, Clare D, Himes BA, Zhang P [Pubmed: 35022621] [DOI: 10.1038/s41596-021-00648-5] |
25.6 GB | 4.5 Å | |
2023-06-23 | Hexameric human IgG3 Fc complex [stack of 1193 particles in MRC format] | Abendstein LA, Sharp THS | 25.9 GB | 14.0 Å | |
2017-07-26 | Cryo EM of Type VI Secretion System VipA-N3/VipB/Hcp complex [260 multi-frame micrographs composed of 30 frames each in TIFF format] | Wang J, Basler M [Pubmed: 28947741] [DOI: 10.1038/s41564-017-0020-7] |
26.2 GB | 3.7 Å | |
2020-02-18 | Cryo-EM structure of an undocked innexin-6 hemichannel in detergent [497 micrographs in MRC format] | Burendei B, Shinozaki R, Watanabe M, Terada T, Tani K, Fujiyoshi Y, Oshima A [Pubmed: 32095518] [DOI: 10.1126/sciadv.aax3157] |
26.4 GB | 3.8 Å | |
2020-08-17 | Helical Reconstruction of a left-handed and membrnae-bound ESCRT-III copolymer comprised of human CHMP1B and IST1 [stack of 57915 particles in MRCS format] | Nguyen HC, Talledge N, McCullough J, Sharma A, Moss FR, Iwasa JH, Vershinin MD, Sundquist WI, Frost A [Pubmed: 32251413] [DOI: 10.1038/s41594-020-0404-x] |
26.8 GB | 3.1 Å | |
2017-11-28 | FIB-SEM of a dividing cell at 3.9 min after anaphase onset [2293 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
26.8 GB | — | |
2024-05-14 | Aligned tilt series of stationary phase Burkholderia thailandensis tomograms [40 tilt series in MRC format] | Welch MD, Khanna K [Pubmed: 38725941] [DOI: 10.17912/micropub.biology.001178] |
26.9 GB | — | |
2017-11-28 | FIB-SEM of a dividing cell at 3.1 min after anaphase onset [1652 multi-frame micrographs composed of 1 frames each in TIFF format] | Otsuka S, Steyer AM, Schorb M, Hériché JK, Hossain MJ, Sethi S, Kueblbeck M, Schwab Y, Beck M, Ellenberg J [Pubmed: 29323269] [DOI: 10.1038/s41594-017-0001-9] |
27.0 GB | — | |
2019-02-20 | Cryo electron microscopy of tau filaments from sporadic Alzheimer's disease brain [507 micrographs in MRC format] | Falcon B, Zhang W, Schweighauser M, Murzin AG, Vidal R, Garringer HJ, Ghetti B, Scheres SHW, Goedert M [Pubmed: 30276465] [DOI: 10.1007/s00401-018-1914-z] |
27.0 GB | 3.2 Å | |
2024-04-23 | Cryo-Electron Tomography of Golgi Apparatus from a Zebra Fish Embryo [1 tilt series in MRC format] | Gervinskas G, Trepout S, Venugopal H, Ramm G | 27.6 GB | — | |
2018-05-02 | Correlative microscopy of vitreous sections provides insights into BAR-domain organisation in situ [9 tilt series in MRC format] | Bharat TAM, Hoffmann PC, Kukulski W [Pubmed: 29681471] [DOI: 10.1016/j.str.2018.03.015] |
27.9 GB | — | |
2023-03-13 | Tilt series of authentic mumps virus nucleocapsid isolated from lysate of chronically infected HeLa cells under arsenite stress [840 tilt series in TIFF format] | Zhang X, Mahamid J | 27.9 GB | 4.5 - 6.3 Å | |
2015-01-16 | Tobacco Mosaic Virus Falcon II dataset including manually boxed helix coordinates [28 multi-frame micrographs composed of 16 frames each in MRC format] | Fromm SA, Bharat TAM, Jakobi AJ, Hagen WJH, Sachse C [Pubmed: 25528571] [DOI: 10.1016/j.jsb.2014.12.002] |
28.0 GB | 3.7 Å | |
2016-07-06 | Unsupervised single-particle deep classification via statistical manifold learning [multiple data sets in MRC format] | Wu J, Ma YB, Congdon C, Brett B, Chen S, Xu Y, Ouyang Q, Mao Y | 28.2 GB | — | |
2022-12-13 | Focused ion beam-scanning electron microscopy links pathological myelin outfoldings to axonal changes in mice lacking Plp1 or Mag [1186 micrographs in TIFF format] | Steyer AM, Möbius W [Pubmed: 36354016] [DOI: 10.1002/glia.24290] |
28.2 GB | — | |
2024-02-26 | Graphene-sandwiched 20S proteasome [50 multi-frame micrographs composed of 32 frames each in MRCS format] | Liu N, Xu J, Wang HW [Pubmed: 38252835] [DOI: 10.1073/pnas.2309384121] |
28.9 GB | 2.6 Å | |
2017-12-18 | CryoET of apoferritin single particle [multiple data sets in MRC format] | Dandey VP, Wei H, Brasch J, Chase J, Acharya P, Tan YZ, Zhang Z, Kim LY, Scapin G, Rapp M, Eng ET, Rice MJ, Cheng A, Negro CJ, Shapiro L, Kwong PD, Jeruzalmi D, des Georges A, Potter CS, Carragher B [Pubmed: 29809143] [DOI: 10.7554/eLife.34257] |
29.2 GB | — | |
2022-04-19 | In situ architecture of the lipid transport protein VPS13C at ER-lysosomes membrane contacts [5 tilt series in MRC format] | Cai S [Pubmed: 35858323] [DOI: 10.1073/pnas.2203769119] |
29.5 GB | 47.0 Å | |
2021-11-01 | electron cryo-tomograms of axons from human cerebral organoids, expressing L1CAM-GFP [multiple data sets in MRC and TIFF formats] | Hoffmann P, Giandomenico S, Ganeva I, Wozny M, Sutcliffe M, Lancaster M, Kukulski W [Pubmed: 34698018] [DOI: 10.7554/eLife.70269] |
30.5 GB | — |