오사카 대학의 EMPIAR-PDBj 팀은, 아시아의 EM 연구자가 용량이 큰 EM 이미지를 EMPIAR 데이터베이스에 전송하는 것을 돕고 있습니다. 인터넷을 통하여 EBI (UK)에 직>접 데이터를 전송하는 대신, 이용자는 우편이나 택배를 통하여 하드 디스크를 오사카 대학으로 보내실 수 있습니다. 혹은 인터넷을 이용하여 오사카 대학의 서버로 전>송 하실 수 있습니다. 오사카 대학에 데이터 전송 서비스를 희망하시는 분은 데이터를 보내시기 전에 먼저 이메일 통하여 등록하시고 싶은 EM데이터에 관하여 상담하십시오.
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2021-06-25 | The structure of human CST reveals a decameric assembly bound to telomeric DNA [multiple data sets in TIFF and MRC formats] | Lim C, Barbour AT, Zaug AJ, Goodrich KJ, McKay AE, Wuttke DS, Cech TR [Pubmed: 32499435] [DOI: 10.1126/science.aaz9649] |
14.3 TB | 3.0 Å | |
2021-06-18 | cryo-FIB and cryo-ET study of ribosome and polysome structures in E. coli [3 tilt series in MRC format] | Xiang YJ, Chang YJ, Liu J, Jacobs-Wagner C [Pubmed: 34186018] [DOI: 10.1016/j.cell.2021.05.037] |
9.7 GB | 20.0 - 27.0 Å | |
2021-06-18 | Single particle cryo-EM dataset of mouse heavy chain apoferritin collected on cryoARM300 with beam-image shift of 7 um [3125 multi-frame micrographs composed of 59 frames each in TIFF format] | Efremov R, Stroobants A [Pubmed: 33950012] [DOI: 10.1107/S2059798321002151] |
695.6 GB | 1.7 Å | |
2021-06-18 | Subtomograms of nucleosomes extracted from cryo-tomograms of Drosophila melanogaster embryos [1 subtomograms in EM format] | Harastani M, Eltsov M, Leforestier A, Jonic S [Pubmed: 34095222] [DOI: 10.3389/fmolb.2021.663121] |
666.3 MB | — | |
2021-06-18 | Bacteriophage PhiKZ non-virion RNA Polymerase [10741 multi-frame micrographs composed of 32 frames each in TIFF format] | de Martin Garrido N, Lai Wan Loong YTE, Aylett CHS [Pubmed: 34181731] [DOI: 10.1093/nar/gkab539] |
3.3 TB | 3.3 Å | |
2021-06-16 | TSC complex particles [3507 multi-frame micrographs composed of 1 frames each in MRC format] | Ramlaul K, Fu W, Li H, de Martin Garrido N, He L, Trivedi M, Cui W, Aylett CHS, Wu G [Pubmed: 33307091] [DOI: 10.1016/j.jmb.2020.166743] |
13.1 TB | 4.2 Å | |
2021-06-11 | Cas6-reverse transcriptase-Cas1—Cas2 CRISPR integrase complex [3330 multi-frame micrographs composed of 50 frames each in TIFF format] | Hoel CM, Wang JY, Doudna JA, Brohawn SG [Pubmed: 33958590] [DOI: 10.1038/s41467-021-22900-y] |
2.2 TB | 3.4 - 3.9 Å | |
2021-06-11 | Single particle cryo EM dataset of SARS-CoV-2 Spike protein with D614G substitution [10051 multi-frame micrographs composed of 32 frames each in MRC format] | Benton DJ, Wrobel AG, Rosenthal PB, Gamblin SJ [Pubmed: 33579792] [DOI: 10.1073/pnas.2022586118] |
4.5 TB | 3.5 - 4.2 Å | |
2021-06-09 | 200kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.65 A [8 diffraction images in SMV format] | Zhou H, Luo F, Luo Z, Li D, Liu C, Li X [Pubmed: 31334636] [DOI: 10.1021/acs.analchem.9b01162] |
9.5 GB | 0.65 Å | |
2021-06-09 | 120kV MicroED structure of FUS (37-42) SYSGYS solved from merged datasets at 0.60 A [8 diffraction images in SMV format] | Zhou H, Luo F, Luo Z, Li D, Liu C, Li X [Pubmed: 31334636] [DOI: 10.1021/acs.analchem.9b01162] |
9.2 GB | 0.6 Å | |
2021-06-04 | Cryo-EM of GLP-1 receptor bound to GLP-1 and Gs protein [5739 multi-frame micrographs composed of 75 frames each in TIFF format] | Zhang X, Belousoff MJ, Zhao P, Kooistra AJ, Truong TT, Ang SY, Underwood CR, Egebjerg T, Šenel P, Stewart GD, Liang YL, Glukhova A, Venugopal H, Christopoulos A, Furness SGB, Miller LJ, Reedtz-Runge S, Langmead CJ, Gloriam DE, Danev R, Sexton PM, Wootten D [Pubmed: 33027691] [DOI: 10.1016/j.molcel.2020.09.020] |
1.9 TB | 2.1 Å | |
2021-06-04 | Distinct mechanisms of the human mitoribosome recycling and antibiotic resistance [stack of 6649 particles in MRC format] | Keshavan P, Banavali NK [Pubmed: 34127662] [DOI: 10.1038/s41467-021-23726-4] |
2.3 TB | 3.15 - 3.49 Å | |
2021-06-04 | Bacteriophage PhiKZ non-virion RNA Polymerase [8765 micrographs in MRC format] | de Martin Garrido N, Lai Wan Loong YTE, Aylett CHS [Pubmed: 34181731] [DOI: 10.1093/nar/gkab539] |
769.6 GB | 3.3 Å | |
2021-06-04 | Cryo-EM structure of human rod CNGA1 channel in apo-state [stack of 274333 particles in MRCS format] | Xue J, Han Y, Zeng W, Wang Y, Jiang Y [Pubmed: 33651975] [DOI: 10.1016/j.neuron.2021.02.007] |
84.9 GB | 2.6 Å | |
2021-06-04 | Cryo-EM structure of SARS-CoV-2 spike at pH 4.0 [10326 multi-frame micrographs composed of 40 frames each in TIFF format] | Tsybovsky Y, Zhou T [Pubmed: 33271067] [DOI: 10.1016/j.chom.2020.11.004] |
1.9 TB | 2.4 Å | |
2021-05-28 | CLEM/FIB-SEM Imaging of T Cells after the Formation of Signaling Microclusters at the Immunological Synapse [160 micrographs in TIFF format] | Narayan K | 26.6 MB | — | |
2021-05-26 | CryoEM single particle analysis of 65 kDa human haemoglobin using a 200 kV Talos Arctica [1416 multi-frame micrographs composed of 70 frames each in TIFF format] | Mann D, Sachse C | 1.5 TB | 3.04 Å | |
2021-05-25 | Human DPP9-CARD8 complex-VbP [multiple data sets in TIFF format] | Sharif H, Hollingsworth LR, Griswold AR, Hsiao JC, Wang Q, Bachovchin DA, Wu H [Pubmed: 34019797] [DOI: 10.1016/j.immuni.2021.04.024] |
2.1 TB | 3.3 Å | |
2021-05-25 | Human DPP9-CARD8 complex [multiple data sets in TIFF format] | Sharif H, Hollingsworth LR, Griswold AR, Hsiao JC, Wang Q, Bachovchin DA, Wu H [Pubmed: 34019797] [DOI: 10.1016/j.immuni.2021.04.024] |
1.6 TB | 3.3 Å | |
2021-05-25 | Human DPP9-CARD8 complex-S297A [3840 multi-frame micrographs composed of 50 frames each in TIFF format] | Sharif H, Hollingsworth LR, Griswold AR, Hsiao JC, Wang Q, Bachovchin DA, Wu H [Pubmed: 34019797] [DOI: 10.1016/j.immuni.2021.04.024] |
967.9 GB | 3.86 Å | |
2021-05-25 | Structural basis of ω-3 fatty acid transport across the blood-brain barrier [15516 multi-frame micrographs composed of 50 frames each in TIFF format] | Cater RJ, Chua GL, Erramilli SK, Keener JE, Choy BC, Tokarz P, Chin CF, Quek DQY, Kloss B, Pepe JG, Parisi G, Wong BH, Clarke OB, Marty MT, Kossiakoff AA, Khelashvilli G, Silver DL, Mancia F [Pubmed: 34135507] [DOI: 10.1038/s41586-021-03650-9] |
3.9 TB | 3.03 Å | |
2021-05-25 | structure of potato virus X, the prototype of the Alphaflexiviridae family [3024 multi-frame micrographs composed of 40 frames each in MRC format] | Grinzato A, Kandiah E, Zanotti G [Pubmed: 32203412] [DOI: 10.1038/s41589-020-0502-4] |
6.6 TB | 2.2 Å | |
2021-05-25 | EER movies of human light chain apoferritin [multiple data sets in EER format] | Guo H, Franken E, Deng Y, Benlekbir S, Singla Lezcano G, Janssen B, Yu L, Ripstein ZA, Tan YZ, Rubinstein JL [Pubmed: 32939278] [DOI: 10.1107/S205225252000929X] |
642.1 GB | 2.07 - 3.3 Å | |
2021-05-21 | Tilt series of dividing vegetative and sporulating cells of Bacillus subtilis from the manuscript - Khanna et al., 2021 [multiple data sets in MRC format] | Khanna K, Lopez-Garrido J, Sugie J, Pogliano K, Villa E [Pubmed: 34018921] [DOI: 10.7554/eLife.62204] |
8.7 GB | — | |
2021-05-17 | Single-Particle CryoEM of Human Apoferritin Light Chain Vitrified Using Back-it-up [multiple data sets in MRCS and MRC formats] | Tan YZ, Rubinstein JL [Pubmed: 33135680] [DOI: 10.1107/S2059798320012474] |
2.1 TB | 2.0 Å |