大阪大学のEMPIAR-PDBjチームでは、アジアの電顕研究者が、EMPIARデータベースに大きな電顕画像を転送するお手伝いをしています。 ネットワークでイギリスに転送する代わりに、ハードディスク自体を郵送・宅配便で大阪大学に送付、あるいは阪大のサーバまでネットワーク転送していただければ、こちらで仲介して登録サイトへの転送を代行します。 EMPIARへの登録を希望する方で、阪大へのデータ送付・転送をご希望の方は、まず、e-mail で、登録したい電顕画像データについて、ご相談ください。
Release date | Imageset | Title | Authors and references | Size | Resolution |
---|---|---|---|---|---|
2017-05-15 | Untilted Single-Particle CryoEM of Highly Preferred Orientated Influenza Hemagglutinin Trimer [multiple data sets in MRC format] | Tan YZ, Lyumkis D [Pubmed: 28671674] [DOI: 10.1038/nmeth.4347] |
1.2 TB | 4.2 Å | |
2016-07-06 | Unsupervised single-particle deep classification via statistical manifold learning [multiple data sets in MRC format] | Wu J, Ma YB, Congdon C, Brett B, Chen S, Xu Y, Ouyang Q, Mao Y | 28.2 GB | — | |
2024-03-18 | Unseeded Aβ(1-40) amyloid fibrils [4628 multi-frame micrographs composed of 918 frames each in EER format] | Pfeiffer PB, Schmidt M, Fändrich M [Pubmed: 38158175] [DOI: 10.1016/j.jmb.2023.168422] |
1.9 TB | 2.59 - 2.73 Å | |
2021-02-10 | Unaligned movies for ubFANCD2-FANCI + DNA [multiple data sets in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
4.5 TB | 3.8 Å | |
2021-02-10 | Unaligned movies for FANCD2-FANCI + DNA [5990 multi-frame micrographs composed of 50 frames each in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
1.7 TB | 4.1 Å | |
2021-02-10 | Unaligned movies for FANCD2 dimer [6218 multi-frame micrographs composed of 40 frames each in TIFF format] | Shakeel S, Alcón P, Passmore LA [Pubmed: 32066963] [DOI: 10.1038/s41594-020-0380-1] |
3.7 TB | 3.4 Å | |
2021-02-10 | Unaligned movies for FA core complex and symmetric complex [multiple data sets in TIFF format] | Passmore LA, Shakeel S [Pubmed: 31666700] [DOI: 10.1038/s41586-019-1703-4] |
13.2 TB | 4.2 Å | |
2023-06-27 | Unaligned cryo-EM micrographs of Human SHMT1 in complex with RNA [5450 multi-frame micrographs composed of 40 frames each in TIFF format] | Spizzichino S, Marabelli C, Chaves-Sanjuan A, Bolognesi M, Giardina G, Cutruzzola F | 3.9 TB | 3.52 Å | |
2023-08-18 | Unaligned cryo-EM micrographs of AL55 amyloid fibrils extracted from the kidney of an AL amyloidosis patient [1819 multi-frame micrographs composed of 40 frames each in MRC format] | Chaves-Sanjuan A, Puri S, Schulte T, Ricagno S [Pubmed: 37516426] [DOI: 10.1016/j.jmb.2023.168215] |
1.0 TB | 4.0 Å | |
2023-06-23 | Unaligned and aligned cryo-EM micrographs of 82-kDa malate synthase G [multiple data sets in TIFF format] | Wu K.-P. [Pubmed: 36997036] [DOI: 10.1016/j.jsb.2023.107958] |
227.3 GB | 2.89 - 4.14 Å | |
2021-02-12 | Ultra-high voltage electron microscope tomography tilt series of neurite section [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — | |
2021-02-12 | Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 6,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — | |
2020-05-27 | Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 20,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — | |
2021-02-12 | Ultra-high voltage electron microscope tomography tilt series of 0.7-μm-thick neurite section acquired at 15,000× magnification at an accelerating voltage of 1 MV [1 tilt series in MRC format] | Nishida T, Yoshimura R, Nishi R, Imoto Y, Endo Y [Pubmed: 32133640] [DOI: 10.1111/jmi.12885] |
120.3 MB | — | |
2023-01-25 | Ubiquitinated FANCI in complex with FANCD2 and double-stranded DNA [multiple data sets in TIFF format] | Lemonidis K, Rennie ML, Arkinson C, Chaugule VK, Clarke M, Streetley J, Walden H [Pubmed: 36385258] [DOI: 10.15252/embj.2022111898] |
2.9 TB | 4.14 Å | |
2020-03-04 | Two new polymorphic structures of human full-length alpha-synuclein fibrils solved by cryo-electron microscopy [1713 micrographs in MRC format] | Guerrero-Ferreira R, Taylor NM, Arteni AA, Kumari P, Mona D, Ringler P, Britschgi M, Lauer ME, Makky A, Verasdonck J, Riek R, Melki R, Meier BH, Böckmann A, Bousset L, Stahlberg H [Pubmed: 31815671] [DOI: 10.7554/eLife.48907] |
90.9 GB | 2.98 - 3.4 Å | |
2022-02-22 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 3 [1259 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
839.8 GB | 3.13 - 3.23 Å | |
2022-03-08 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 2 [4000 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
1.5 TB | 1.92 Å | |
2022-02-24 | Tutorial for high-throughput cryo-EM structure determination of amyloids: Dataset 1 [331 multi-frame micrographs composed of 34 frames each in TIFF format] | Lövestam S, Scheres SHW [Pubmed: 35244536] [DOI: 10.7554/eLife.76494] |
476.1 GB | 2.07 Å | |
2015-10-01 | Tubulin Chaperone complexes TBC-DEG Q73L: alpha beta-tubulin:TBCC complex [stack of 16801 particles in MRC format] | Nithianantham S, Le S, Seto E, Jia W, Leary J, Corbett KD, Moore JK, Al-Bassam J [Pubmed: 26208336] [DOI: 10.7554/eLife.08811] |
1.0 GB | 24.0 Å | |
2015-10-01 | Tubulin Chaperone complexes TBC-DEG Q73L: alpha beta-tubulin complex [stack of 18361 particles in MRC format] | Nithianantham S, Le S, Seto E, Jia W, Leary J, Corbett KD, Moore JK, Al-Bassam J [Pubmed: 26208336] [DOI: 10.7554/eLife.08811] |
1.1 GB | 24.0 Å | |
2022-06-14 | Transmission electron micrographs of mouse RNF213 incubated with ATPγS [multiple data sets in TIFF format] | Ahel J, Weis F, Clausen T | 2.3 TB | 4.0 Å | |
2022-06-14 | Transmission electron micrographs of mouse RNF213 in a chemically-stabilized complex with human UBE2L3 [4591 multi-frame micrographs composed of 40 frames each in TIFF format] | Ahel J, Weis F, Clausen T | 2.1 TB | 3.5 Å | |
2023-01-30 | Translating 70S ribosome [19449 multi-frame micrographs composed of 1295 frames each in EER format] | Fromm SA, O'Connor KM, Purdy M, Bhatt PR, Loughran G, Atkins JF, Jomaa A, Mattei S [Pubmed: 36841832] [DOI: 10.1038/s41467-023-36742-3] |
7.1 TB | 1.55 Å | |
2021-01-15 | Transcription-translation coupling complex (TEC27_NusG_CHAPSO) [21 micrographs in MRC format] | Ebright RHE [Pubmed: 32820061] [DOI: 10.1126/science.abb5317] |
201.5 GB | 4.7 Å |